Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->AHL20(2)                                                  <---------AHL20(2)                                              <-------TEIL                                           ----------->GT1                                     ------     <---------AHL20(2)               ----------->HVH21                          --------->ANAC58    <---------AHL20(2)               <-----------HVH21                           --------->ANAC46    --------->AHL20(2)              <---------ANAC46              <---------ANAC58  ------->TEIL   <---------WOX13(1)               <---------ANAC58              <---------ANAC58 <---------ALFIN1 ---------YAB1                  <----------DOF2<-----------------AGL3            --------->ANAC58<--- -------->GT1         ------>ZmHOX2a(1)  <---------ANAC46  ------>ZmHOX2a(2)    ------->TEIL   ------ ------>YAB1        --------->YAB1  <---------ANAC58     <---------AGP1       <---------ZAT18 <------   tggtgattaatttgtattccaatcctatttggaactttgtgtgaggggttcataaattggatctatttgcttccatgtaatgcacgcacctcttgtatga  2208300                                           --------->YAB1      --------->AHL20(2)   <---------MYB46(3)                                         --------->AHL20(2)  --------->AHL20(2)     <-------GAMYB     <---------ICU4                           ----------->GT1 --------->AHL20(2) --------->ALFIN1      <---------ATHB12                         --------->DAG2 --->YAB1     <---------AHL20(2)        <-----------GT1           ---------->DOF2 ---------->DOF2 ------YAB1   --------->AHL20(2)      <---------AHL20(2)     --------->LBD16  --------->SPL7 ----->GT1 --------->AHL20(2)         --------->AHL20(2)    --------->ANAC46<---------SPL7  --------- ---YAB1  --------->AHL20(2)         --------->YAB1  <---------AtMYB61    --------------->AtSPL3   taaataaaaaaaataaaaaaatgtgtgagttgttgacaattttaatcatcttgttttggtctccgaaacaaagaaaaccgtaccaaaagtaaatttgtta  2208400                                                  --------->YAB1                                                 <---------YAB1                                   --------->GLK1(2)                                       --------->GLK1(1)                <---------ETT(2)   --------->ARR14(2)                             <----------DOF2    ----------->GT1                ------------>MYB.PH3(1)                      --------->ZAT2   --------->DAG2         ---------->DOF2<---------MYB46(3)                     <---------At4g35610 <  ---------->DOF2    ---------->DOF2    <---------MYB52(1)                      --------->At4g35610 < -->GT1         --------->ETT(2)  <---------GLK1(2) <---------YAB1--------->MYB52(1)    ------->GAMYB   aacaaaaagtaaaactcgtcgacaaaagaaaagtcagaatcggttattgatatcataaatgggagagccaacgtttgatcacagcttcaacggagttcta  2208500                       ----------->HVH21             <---------RAP2.6(2)             --------->ATERF1(2)             <---------ATERF1(2)             <---------DEAR3(1)            --------->ATERF1(1)           <---------RAP2.3(1)           <---------DEAR4(2)           <---------ATERF1(1)          --------->ALFIN1          <---------DEAR3(1)         <------ZmHOX2a(1)        <---------bZIP60(2)     <---------ANAC46<---------ANAC58   <---------MYB46(3)----------->GT1 <---------ANAC58    <---------ANAC58                                  --------------->AGL15 <-------GAMYB------>NtERF2        <<<<<<<<<RAP2.2          --------->ANAC55(2)                ------ <---------ANAC58    <---------ANAC46                    <---------ARR14(2)          <---------ARR14(2) ------MYB83<------NtERF2         <---------TOE2(3)      --------->ARR14(2)       <---------ANAC55(2) ------MYB46(1)<------NtERF2      <---------YAB1   <-----------GT1  <-----------GT1  --------->ARR14(2)   tttggttgtgaggaggcggcaaggcgtgacaaaatttagattgttttttcaaaaaaccatatatgtaatattactactaatattacatatatggtttaag  2208600                                                                                            ---------                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                        ----------->TBP                                                                                      ----------->TBP                                                                                      --------->AHL20(2)                                                                                      <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                                                                                    ----------->TBP                                                                                  --------->AHL20(2)                                                                                  ----------->TBP                                                                                  <---------AHL20(2)                                                                                --------->AHL20(2)                                                                                ----------->TBP                                    <---------ANAC58                            <---------AHL20(2)  <                                    <---------ANAC46                          --------->AHL20(2)    <                            <----------DOF2                               ----------->TBP   <--------                          ------->TEIL                                  --------->CCA1(2) -----------                        <---------ZAT14                                <---------ARR11(3) <---------AHL20(2)                        --------->ZAT14                                --------->ARR11(3) --------->AHL20(2)                        --------->ZAT18                       --------->ANAC58----------->TBP  ------        --------->ZAT18 <---------ZAT18    <---------ATHB12   --------->ANAC58<---------AHL20(2)  <--    <-----------------------TaNAC69(2) ------------>CBF     <---------ANAC58--------->AHL20(2) <----- --------->YAB1       <---------------AtSPL8                <---------AtLEC2----------->TBP <-------- ----->GT1       ---------->DOF2    <---------ANAC58        <---------ANAC58<---------AHL20(2)<------   taaaaataagtggtctgcataaagagtgtactttgatgtcgtccaatgtttgaatacattttgcatgctataagatatatatatatatatatatatatat  2208700   <---------AHL20(2) <---------YAB1 >AHL20(2) ---------AHL20(2)                                                                --------->ANAC58 ---------AHL20(1)                                                   --------->At4g35610 -AHL20(2)                                                           ----------------------->TaNAC69(2) >TBP                                                                <---------At4g35610 --->AHL20(1)                         ------->TEIL                <---------ANAC58--------->ANAC58 -------AHL20(2)                 --------->At4g35610              <---------ANAC58--------->ANAC55(1) ----AHL20(1)                <---------REM1(1)           <---------ANAC55(2)      --------->ANAC46 ---TBP                 ---------->DOF2                  ----------->GT1        <---------ALFIN1 ---AHL20(2)----------->GT1 *TSS <---------At4g35610  <------ZmHOX2a(2)     <-----------HVH21   attatttttttgggatgaaaaacagggaaagttgaagctgaaccccaatgcattggatcatgtgaaatgcttgctgactgtcacacggctcacatcaaga  2208800                                                                                     --------->ANAC55(2)                                                                                    <-------TEIL                                                                                    ------->TEIL                                                                                <---------------AtSPL3                                                                                <---------------AtSPL8                                                                           --------->TOE1(3)                        <---------ANAC46                                   --------->TOE2(3)                       --------->MYB55(2)                                <---------ARR14(2)                      --------->WRKY38(1)                                <---------ARR11(1)                     <---------MYB52(1)                  <---------ATHB12------->TEIL<---------ANAC55(2)                   <---------ANAC58                      --------->MYB46(3)--------->YAB1       <---------ARR14(2)<---------ANAC46        <---------MYB46(3)      --------->ARR14(2)    <---------ANAC55(2)--------->MYB52(2)        <---------REM1(1)       --------->GLK1(2)    --------->ANAC55(2)<---------MYB46(3)      <-------GAMYB            <---------CCA1(2)        ----   <-------TEIL    <---------ANAC58           <-----------RAV1(1)       <---------ARR14(1)-----------   tgggatacatatttggccaatgcgttggctggaaaactcccaatatgtgtgttgttgcaaccattcaatgtttcgaatcttaaatgtacgtattgaaaat  2208900                                 <---------AHL20(1)                                 --------->AHL20(1)                                 --------->AHL20(2)                                 <---------AHL20(2)                         <---------WOX13(1)                       --------->ATHB12                      <---------YAB1                  <---------AHL20(1)                  --------->ARR11(3)                        <-------MYC3                  --------->AHL20(1)    --------->YAB1      ------->MYC3                  <---------ARR11(3)   <---------YAB1  --------->ANAC58                 --------->CCA1(1)   --------->YAB1    --------->ANAC58 ----->YAB1      --------->RVE1(1)  <---------YAB1 --------->YAB1          <----------DOF2 >GT1       <----------DOF2<-----------GT1      --------->YAB1       <-----------GT1               --   catcaacaaaaactctttaatatcttgattaacaatttattatgatactacaataacaagcatgtgagttttgacaactttgctcaactcaaaacactta  2209000                                                                                                    <                                                                                               ------                                                                                             ------>ZmHOX2a(2)                                                                                           <---------ARR14(2)                                        <---------AHL20(2)                                 --------->ARR14(2)                                       <---------AHL20(2)                       <---------MYB52(2)  -                                       --------->AHL20(1)                     --------->ZAT6<------ZmHOX2a(2)                                       --------->AHL20(2)           <---------AHL20(2)  --------->ANAC58                                       <---------AHL20(1)           <---------ARR11(3)  --------->ANAC55(2)                                       --------->ARR11(3)           --------->ARR11(3)  --------->ANAC58                                       <---------ARR11(3)           --------->AHL20(1)  --------->ANAC46                             --------->MYB52(1)       <----------DOF2   <-----------GT1 --------->ANAC55(1)                          --------->TOE2(3)   <---------TOE2(3)     --------->AHL20(2) <---------LBD16 ------->YAB1       <---------AtLEC2--------->AHL20(2)<---------DAG2<---------AHL20(1)--------->MYB52(1)   aaaataagaaaacaaaacatttgcatttcattaacagataatatatttgacgaaaacttttttaaaacaatatattacgaccactaacacacggatccga  2209100                                                                --------->AHL20(2)                                                                <---------AHL20(2)                 <---------ARR11(3)                 --------->YAB1                --------->YAB1                    --------->AHL20(2) ---------ARR14(2) --------->YAB1                 <---------AHL20(2)         <---------ZAT2      <--- --->LBD16     --------->ICU4                   <---------AHL20(2)           <---------At4g35610 ---- -------->ARR14(2)<---------YAB1          --------->YAB1       --------->AHL20(2)         --------->YAB1   agtatacggctaatgccatgatcatattttgaaatgctgttcattcatatataaaaataaaactattaaaaaacaatccagctaatactgaatcaaaaac  2209200  Previous    Next  AGI:  At3g06995.1    Description:  Encodes a Defensin-like (DEFL) family protein [pseudogene] Range:  from: 2208728    to: 2208883    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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