Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <-----------HVH21                                                                <----------DOF2                                                        -------->HAHB4                                                       <---------YAB1                                                     --------->YAB1                                                     <---------ICU4                                                    <---------ATHB51                           --------->ANAC58         --------->AHL20(2)                           --------->ANAC58         --------->ICU4                           --------->ANAC46         <---------AHL20(2)                            <--              <-----------RAV1(2)                  --------->AHL20(2)                      --------->DAG2              --------->HSFB2a(2)                  <---------AHL20(1)          --------->YAB1   ----- >GLK1(2)     <---------HSFB2a(2)   --------->ARR14(2) --------->ICU4   ---------->DOF2   ---------->DOF2   tgaacatcgaattggcccagaagagacacaagccttgggattcacaaaaacaaaataattatcgaactttcaccgaaagtatcagaaaaaaaaaaagtta  2196200                                                                                 <---------ALFIN1                                                                               ------>NtERF2                                                                              --------->DEAR3(1)                                                                            ------>NtERF2                                                                            --------->ABI4(1)                                                                            <---------ATERF1(1)                                                                           --------->DEAR3(1)                                                                           ------->GAMYB                                                                           --------->DREB2C(2)                                                                           <---------ALFIN1                                                                          --------->DEAR4(2)                                                                         --------->ABI4(1)                                                                        --------->AtMYB61                                                                        <---------ALFIN1                                                                        --------->DEAR3(1)                           <-----------RAV1(1)                         <---------MYB55(2)         <--                           --------->MYB55(2)                          --------->MYB46(3)      ------                <------MYB46(1)                                   <---------ARR14(2)      --------->ALFIN1                <------MYB83                                      --------->ARR14(2)     <---------MYB52(1) ----ZmHOX2a(1)<---------AtMYB61   ---------->DOF2    <----------DOF2--------->ANAC46   --------->LBD16 ---->MYB59<---------LBD16 <---------MYB46(3)    <------ZmHOX2a(1)--------->GLK1(2)   <---------LBD16   ggatttttgaatttggggaggtataccagttgttggagaaaggaagagtgaggactctttgaagagagaatccaccaccgcctccatctccggtgttggg  2196300                                        <---------DEAR3(1)                                        --------->ALFIN1                                    ---------->DOF2         <---------ANAC58 <---------ARR14(2)                ----------->HVH21        <---------ANAC46 --------->ARR14(2)        --------->ALFIN1      --------->ARR11(3)                   <---------HSFB2a(2) -------ANAC46            <-----------HVH21--------->ALFIN1 <---------ANAC58          --------->HSFB2a(2) ----->HVH21      >>>>>>>>>NAM ------>NtERF2     <---------ARR11(3)     --------->CCA1(2)   acggataggggagaaggaagggatgagaggtgaggccatgaagcggtggaagaactcaacttgcttagggcgagatagacgagtgcctctagagagacct  2196400                                --------->ABI4(2)                                ------>NtERF2                                <---------ZAT18                         ------->MYC2                         <-------PIF5                         ------->PIF5                         <-------MYC2                <------ZmHOX2a(1)           <-----------HVH21  --------->ATERF1(1)          =============HOX2a_HOX2a          ------>ZmHOX2a(2)  <---------ANAC58        ----------->HVH21        --------->ARR14(2)   <---------ANAC58      --------->At4g35610                ------>NtERF2        <---------ARR14(2)   <---------ATERF1(1)   <---------At4g35610               --------->DEAR3(1)        <---------ARR11(3) <---------ZAT14      --------->LBD16      <---------HSFB2a(2)        --------->ARR11(3) --------->SPL7     <---------LBD16        --------->HSFB2a(2)       <------ZmHOX2a(1) <-------MYC3         <---------At4g35610    <-----------RAV1(2)        ----- <------ZmHOX2a(1)       ------->MYC3     <-----------HVH21       --------->PCF5     <---------ETT(1) ================HOX2a_HOX2a<---------DEAR3(1)--------->At4g35610<-----------HVH21   ----------->HVH21   agaggaagaggatcgtcaggaacagctcgtgcggtgccctcgagcgtcaccggagttgacatatcgaggtcccagatgtctccctctccgacccatctca  2196500                           <------NtERF2                           --------->ATERF1(1)                          ------>NtERF2                          <---------ATERF1(1)                          <-----------HVH21                         --------->O2                         --------->RAP2.3(2)                         --------->DEAR3(1)                        --------->ATERF1(1)                        --------->ERF1                        --------->DEAR4(2)                        <------NtERF2                        --------->RAP2.3(1)                        --------->RRTF1(1)                       --------->ABI4(1)                       <---------ATERF1(1)                       ------>NtERF2                      --------->RRTF1(2)                      --------->RRTF1(3)                      --------->DREB2C(2)                      --------->RAP2.3(3)                      --------->RAP2.3(2)                      <---------DEAR3(1)                      --------->DEAR3(1)                      --------->ATERF1(2)                     --------->RRTF1(1)                     --------->DEAR4(2)                     --------->ATERF1(1)                     --------->RAP2.6(1)                     --------->ERF1                     --------->ORA47(2)                     --------->RAP2.3(1)                    <---------At4g35610                    ------>NtERF2                    <---------ATERF1(1)                    --------->At4g35610              <---------LBD16                    --------->LBD16                  *TSS                    --------->ABI4(1)               <---------ANAC46                   --------->ANAC46                 ----------->RAV1(2)                   --------->DEAR3(1)               <---------bZIP60(2)                  --------->ATERF1(1)            ----------->HVH21                  <---------LBD16                --------->WRKY12                 <---------ATERF1(1)           --------->At4g35610                --------->ARR14(2)             ----------->RAV1(2)------>MYB46(1)                <---------ARR14(2)             <---------ZAT2>>>>>>>>>>WRKY38               --------->ATERF1(1)             <---------At4g35610------>MYB83              <---------ATERF1(1)              --------->ZAT2>>>>>>>>>>WRKY26            <---------MYB52(1)               <-----------RAV1(2)<---------MYB59           <-----------HVH21               --------->ANAC46  >>>>>>>>>>WRKY43       --------->ARR14(2)      <---------At4g35610<---------O2    <---------ALFIN1 --------->At4g35610       <---------ARR14(2) ---------------->WRI1--------->RAP2.6(2)--------->REM1(1)<---------At4g35610   <---------LBD16   ttctgttcatctccgtcgtctccgccgccgtcgctcgatttctacacccagctgacctggagatgaccaaacacactcttactctggatttgttcgataa  2196600                  <---------YAB1               <<<<<<<<<MYB2        <---------MYB52(1)       <---------RAP2.6(3)      --------------->AGL15      <---------------AGL15                             ---------->DOF2     --------->MYB52(1)     ---------->ID1--------->YAB1              <-----------GT1             ----------->HVH21     ----------------->AGL1                  <---------AHL20(2)        <---------ANAC58     <-----------------AG                    --------->AHL20(2)        <---------ANAC46     ----------------->AG                --------->AHL20(2)    ---------->DOF2  --------->At5g28300 <     <-----------------AGL1              <---------AHL20(2)<----------ID1<------NtERF2              <     <-----------------AGL3     <---------ANAC58      <----------DOF2  <---------ANAC58  --------->GLK1(2)     <-----------------AGL2     <---------ANAC58    <---------------------WRI1 ----------->GT1 ------   acaccttgccgtttttggttttcataagaagaatgcttcccgtttaattaaaccggcttaaagaacaaagaaggcgtctaacggttaaaagaatcgattt  2196700       <---------TOE2(3)    <---------ARR14(2)    --------->ARR14(2)  --------->LBD16                                                                              ------ <---------ANAC46                                       <------ZmHOX2a(1)                     ------- -----------------AGL2                       ---------->DOF2                               ---------- ---------LBD16                          <------ZmHOX2a(1)  <----------DOF2     --------->ATHB12 --->AHL20(2)    -------->ATHB1 ---------->DOF2     --------->TOE1(2)<-------TEIL      --------->TOE2(3)   attccggttatggattgaattattcggtttgaataaaagagtaggaacaaagaaactaggaactttagaaattcatatcaattcatttgcctcaaaagct  2196800                                                    --------->ANAC46                                                    ------->GAMYB                                                   --------->MYB46(3)                                                  <---------At5g28300                                                 <-----------GT1                                                 --------->MYB52(1)                                              --------->YAB1            --------->ARR11(3)                                            <---------AHL20(2)    <---------ANAC55(2)                                            --------->AHL20(2)    --------->ANAC55(2)                                        --------->YAB1          <---------ALFIN1                                        --------->ATHB12      ----------->RAV1(1)                                        <---------ICU4  <---------ZAT2  <---------ARR11(3)                                        -------->HAHB4  --------->ZAT2 --------->RVE1(1)    <-------- --->TOE1(3)                           --------->ICU4   --------->At4g35610            <---------AHL20(2) ---->GT1               <---------YAB1 <---------ATHB12 <---------At4g35610       <----------DOF2  <- >DOF2                <-----------GT1  <---------YAB1--------->LBD16   --------->CCA1(1)   <---------ICU4   taaaattcaatgtttgctatggaattaccagtgtctatgtaatgattaaaataaccgcagctagcgacacataatatctcgatgcttttttaatctttat  2196900                                                          <---------ANAC58                                                          <---------ANAC58                                                        <---------ANAC46                                                       <------MYB83                                                   <---------MYB46(3)                                                   <------MYB46(1)                                                   <------MYB83                                                  --------->MYB46(2)                                                  <---------AtMYB61                                                  --------->MYB55(2)                                                  <---------MYB46(3)                                                  --------->MYB111(1)                                                  --------->MYB111(2)                                                 <---------MYB55(1)                                                 <--------P                                           <---------AHL20(2)        <---------AtLEC2                                          <---------AHL20(2)--------->ALFIN1  ------>ZmHOX2a(1)                                      <----------DOF2  <------MYB46(1)    --------->ARR14(2)                                   <---------ARR11(3) --------->MYB111(1) <---------ARR14(2)        --------->YAB1             --------->ARR11(3)<--------P  <---------ANAC58               ----- --DOF2 --------->AHL20(2)      --------->DAG2 <---------MYB46(3)<---------ANAC46              <----- ---------DOF2                 ---------->DOF2 --------->ATHB12  <---------ANAC58  <------ZmHOX2a(1)   tctttgtgaataatatacaaatgtttagaagagaaaagttcttttttaatggttggtagggggtgtttcgtgcatggttcctctaggattccaacttggt  2197000                                                                                  ----------->TBP                                                                                --------->CCA1(2)                                                                       <---------ARR11(1)                                                             <-------MYC3      --------->ARR11(3)                                                        <-----------HVH21     <<<<<<<<<RAP2.2       <           ---------->DOF2      --------->TOE2(3)    ------>MYB83      <---------ARR11(3)   ---------         <---------AHL20(2)   ------->TEIL      <---------ALFIN1       ------->TEIL         --------- ---->WRKY18(1) --------->ARR11(3)      <-----------HVH21    ------->MYC3 <----------DOF2   --------- ------HVH21   <------ZmHOX2a(1)--------->TOE1(3)    ------>MYB46(1)  <---------CCA1(2)     ---------   caggcttatatataaaaggaccttgagttttgaaccctaaaccatcagacacaccttccttcacatgcttctgtatctttagatatatatacacacgcaa  2197100  Previous    Next  AGI:  At3g06960.1    Description:  PDE320 (PIGMENT DEFECTIVE 320). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G44640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70935.1) Range:  from: 2194214    to: 2196553    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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