Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------YAB1     --------->AtMYB61                            --------->GLK1(1)  <---------ALFIN1        ------>NtERF2           <---------GLK1(1)         --------->YAB1 ------>TOE1(1)          <---------ALFIN1        --------->ARR11(3)         <---------ICU4 ------>TOE2(1)  <-------MYC3                    <---------ARR11(3)   <---------ZAT2              --- -----ALFIN1     ------->MYC3              --------->YAB1     --------->ARR11(3)      --------->WOX13(1) --ALFIN1       --------->O2            <---------CCA1(2)     <---------ARR11(3)   --------->TOE2(3)   tcgtccacctccatagccacgttttcgacaccctccctacttgtatcatcagatatcatttcaacatctccaagctcatcatcaacatcaattacttctc  2180800                                                                                                  ---                                                                                                  <--                                                                                               <-----                                                                                       --------->ARR14(2)              ---------->DOF2                                                       <---------HSFB2a(2)           <---------ANAC58                                                         --------->HSFB2a(2)           <---------ANAC58                                        --------->HSFB2a(1) <---------ARR14(2)           ----------->GT1          <----------DOF2                <---------HSFB2a(1) <---------GLK1(2)           <---------ANAC46  <-------TEIL               <---------ANAC58    <---------ALFIN1   <-----   <---------MYB52(1)        <---------ZAT18<-------MYC3<---------ANAC58  ----------->RAV1(1)  <----- ------>ARR14(2)             --------->ZAT18------->MYC3<---------ANAC46 --------->ANAC46    <-------   tatccgttctatagcgtaaagacgaatcaagtgcatttcttttccacatgtcattgttccttgtgagaaaggttcccaacacattaccagaaccttgtcg  2180900                                                                                          --------->HSFB2a(2)        ------>ZmHOX2a(2)                                                                 --------->LBD16       <------ZmHOX2a(2)             <-------TEIL              <---------GLK1(1)          ------>ZmHOX2a(1)      <---------ARR11(3)        <-----------RAV1(2)           <---------ARR11(3)         <---------LBD16      --------->ARR11(3)      <---------ALFIN1                --------->ARR11(3)        ----------->RAV1(2) ------>ZAT18            --------->ARR14(2)          --------->LBD16            ----------->GT1 -------ZAT18            --------->GLK1(2)          --------->ANAC58         --------->MYB52(1) ----ANAC46              <---------ARR14(2)         --------->ANAC46         <---------DOF5.7(2) ----ANAC58           <---------ANAC58              --------->ANAC58    --------->HSFB2a(2) ----ANAC58           <---------ANAC58     ------->TEIL      --------->HSFB2a(1)------->GAMYB ----HVH21--------->ETT(2)   --------->LBD16       <---------LBD16<-----------GT1--------->At5g28300   tgtgctacgatctcgaccgctattgagtatccgcacaggcgcatgaacttgtctccgcaacgaagatttcacttctgggtaacggtaaattcctggagcc  2181000                                                                          --------->ARR14(2)                                                        <---------MYB52(1)<---------ARR14(2)                                                      <---------ANAC46   <---------CCA1(2)                                                      --------------->AGL15                                                     ----------------->AGL3                                                     <-----------------AGL1                                                  ------>NtERF2      ------>MYB46(1)                     <---------LBD16              --------->ABI4(2)  ------>MYB83                    --------->MYB52(1)           --------->DEAR3(1)------->GAMYB                   <---------ARR14(2)          --------->LBD16    --------->MYB46(3)                -           ------->TEIL    <---------ZAT6    --------->DEAR3(2) <-----------GT1                     -        <---------YAB1 --------->LBD16     <-----------GT1--------->MYB52(2)   <---------MYB52(1)   -     --------->ICU4--------->ARR14(2)----------->GT1 <-----------------AGL3  --------->ATHB12   <----   atgggtcttgatgaatgtgagaaaccggagtgtttacaagggtttaaaccggcgctccgtttgtggtaaccatccatatccattggtctgaaacagtagg  2181100                                          ----------->GT1      ------->GAMYB                    ---------->DOF2                                  <---------AtLEC2 -------->YAB1                    --------->MYB52(1)   <---------ALFIN1          <------MYB46(1) -------->TOE1(3)              --------->ANAC46       --------->LBD16            <------MYB83 -------->TOE2(3)            ----------->RAV1(1) --------->ARR14(2)            <---------WOX13(1) --ZmHOX2a(1)              ------>ZmHOX2a(2)     <---------ARR14(2)          --------->ATHB12   <----   aaccataaccctcgaaattcaaaatttgatcccacaaaactgaaaggtcaaaatcccccaattcagagttcaaaaccctagattggtttttcatgaaata  2181200                                                                   <---------LBD16                                                             <-------TEIL                                                            --------->ARR14(1)                                                            --------->GLK1(2)          <------NtERF2           --------->ANAC58                              ----------->ARR10           <---------ANAC46           --------->ANAC46                        <---------ARR14(2)     <xxxxxxxxxxxxxxxsmallRNA(le3)       --------->ANAC58                            --------->ARR14(2)--------->LBD16 <---------ANAC58   *TSS--------->ANAC58                       <---------ARR14(2) --------->ARR14(2)  <---------ANAC58   <---------HSFB2a(2)                      <----------DOF2<---------ARR14(2)     --------->LBD16   --------->HSFB2a(2)       --------->TOE2(3)--------->ARR14(2) <---------ARR14(2)------>NtERF2  <---------LBD16       <----------DOF2    <---------ANAC58--------->ARR14(2)    <---------LBD16 <---------LBD16        <---------DAG2     <---------ANAC58--------->ARR11(1)   <---------LBD16  <--- -------GT1--------->ANAC58<---------YAB1  <---------ANAC46<---------GLK1(2)----------->HVH21    ----   actctcgggaagcaagcaagtttcaacttttcattaaactcactggcgtttccgatacacagattcggacccggacatgagacccgggcgggttttgttt  2181300          --------->WRKY18(1)        <------MYB46(1)                                        <---------LBD16        <------MYB83                                      <------MYB46(1)       --------->MYB59                                    <------MYB83                        -------    --------->CCA1(2)                                --------->DAG2            <---------ANAC58 ------HSFB2a(2)                                   ---------->DOF2 <-----------HVH21   --------->At4g35610 ----->HSFB2a(2)      --------->ARR11(3)          <---------RAP2.6(3)          <---------ANAC58 <----   tggaagagataggtcaaactcaaatatgttgacttatctcataccctctagccgaaagggaggtttctgggtcatgttgtttcttactcggctaaaccta  2181400                                            --------->ZAT2                                            <---------At4g35610                ---------->DOF2                                       ------>ZmHOX2a(1)              ------>ZmHOX2a(1)                                     ----------->RAV1(2)             --------->TOE2(3)  <---------ARR11(3)                                     <---------LBD16   <-----------GT1===========================HOX2a_HOX2a                         --------->ZAT14 ---------->DOF2             --------------->AGL15 <---------   <-----------GT1       --------->At4g35610<---------ZAT2 --------->ZAT14 --------->YAB1 ------>ZmHOX2a(2) -->TOE2(2)              <---------At4g35610--------->At4g35610<---------GLK1(2)    <----------DOF2 -----TOE2(2)  <-----------GT1  --------->ZAT14    <----------DOF2   --------->TOE1(3)  --------->ARR11(3)   tgttttttcttctcgttaaaccctctctgctctctgttctcctgaaagctgggcttttcacttcagaatttccttaaaaataaaagctttgatcttttta  2181500                                                                        <---------ARR14(2)                                                                        --------->ARR14(2)                                                                     <---------ANAC46                                                                    <-------TEIL                                                                  --------->ARR11(1)                                                                 <---------HSFB2a(1)                 <---------ZAT6                                 ----------->ARR10   --------->ARR11(3)                                         <------ZmHOX2a(1)   <---------ARR11(3)        <----------ID1              --------->GLK1(2)   <-----------GT1   <---------AHL20(2)             ----------->GT1 <---------LBD16              ---- <---------YAB1  ----------->GT1                   ----------->GT1<---------ARR14(2)       --------->GLK1(2) -DOF2         ------>ZmHOX2a(2)      ----------->GT1<------ZmHOX2a(1)--------->LBD16<-----------RAV1(2)   gttattatcttcttcgatcgtgttaaattttgagacaaatcggtgatttggaacaggaaaatcaggaagatgcggatgctattaagaccaggtaatctgt  2181600                                                                                             <-------                                                                                            <-------GAMYB                                                                  <---------MYB52(1)       <---------MYB46(3)                                                        --------->GLK1(1)                 <---------AtMYB61                                                        <---------GLK1(1)            ----------->RAV1(2)             --------->GLK1(2)                     --------->At4g35610          <---------REM1(1)     <----------DOF2                   --------->At4g35610      <---------MYB46(3)   <---------ANAC46 ----->REM1(2)                   <---------AHL20(2)<---------At4g35610        <------------CBF<------   gtatgcgcatttcagtttctgaaaattttcagtgtttaatctgctcgattttgagctgaattctggtcgtttcttcatagtattgtagcctggaggttga  2181700  Previous    Next  AGI:  At3g06910.1    Description:  Ulp1 protease family protein. similar to ESD4 (EARLY IN SHORT DAYS 4), cysteine-type peptidase [Arabidopsis thaliana] (TAIR:AT4G15880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70965.1); contains InterPro domain Peptidase C48, SUMO/Sentrin/Ubl1; (InterPro:IPR003653) Range:  from: 2178636    to: 2181203    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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