Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->CCA1(2)   ----------->GT1           <------NtERF2  <-------MYC2              ------>NtERF2  ------->MYC2             <---------ANAC46  <-------MYC3             <---------ANAC58       <---------ANAC46  ------->MYC3             <---------ANAC58       <---------YAB1 <---------ANAC46       <---------DEAR3(1)    <-------GAMYB                                     ----- ---->ETT(1)      <---------ARR14(2)        <---------TOE2(3)                           <-------GAMYB -----HVH21       --------->ARR14(2)  *TSS  <---------TOE1(3)   <---------LBD16     --------->ANAC46   ggaacgtgtaatttagcacagttccgatggcgcgatatgagaaattagggttgtgtttgtgaattttgggggagaaatagataactacgtcgttgtacaa  2153500                       <----------DOF2                       <---------DAG2                     ------>NtERF2                     --------->LBD16                                                        ---------                    --------->ANAC58                                                        ---------                    --------->ANAC58                <---------ZAT18                         <--------                    ------->GAMYB                <---------ANAC58                         <----------                    --------->ANAC46             <---------ANAC46                       --------->AHL20(2)                   <---------MYB55(2)            --------->MYB52(2)                    <---------YAB1         --------->LBD16<----------DOF2          <---------ANAC58                   --------->ICU4      <---------WRKY18(1)                       <-------TEIL                     <-------TEIL ------->TEIL      --------->MYB46(3)        <---------HSFB2a(1)             --------------->AtSPL8 ---->MYB52(1)  <-----------GT1        ---------->DOF2  <----------DOF2      <---------------AtSPL8   acggaccttgcccgaattacacccgcctttttttagaattagaaagcaggttcgtgggctttaaaatttacaagggtttttggtacattattaaacatca  2153600                               --------->ZAT18  <---------ZAT14         --------->ATHB12                                                -----------  --------->ZAT14        --------->ICU4                                                   <---------- >ANAC46                 <---------YAB1                                                  ------------ >YAB1                 --------->YAB1                                                    ------------ -ICU4                --------->ICU4           --------->ZAT6  <---------YAB1            <----------- -GT1         --------->MYB52(1)     ----------->HVH21      <---------MYB52(1)         <-----------GT1   ctacttcactagtagttaacagggatgatgatttgcactgtgacattcaacagtactaaacccttattcttcatctctaaatcaacaatttcccccattt  2153700      --------->ATHB12    --------->GLK1(2)   --------->YAB1                                                  --------->ANAC46 ---->AGL15         <---------ARR14(2)         <---------YAB1    <---------ALFIN1 -----AGL15         <---------GLK1(2)     <---------ICU4   ------->TEIL ----->AGL1         --------->ARR14(2)   <---------YAB1   <---------CCA1(2)                 <-------- ----->AGL2      --------->ANAC55(2)     --------->ICU4 --------->ANAC55(2)        --------->YAB1<--- ------AG        <---------ANAC55(2)--------->YAB1      <---------ANAC55(2)       <-------TEIL <-----   agtaagaatcattcgaatcacatattctcttaagaaaatcatcaagattacgattaatatgtatctcacacttcatcccacaaattcatgaccatactta  2153800                                             ----------->GT1                                <------ZmHOX2a(2)                      --------->LBD16        <----------ID1                     <---------HSFB2a(2)    ----------->GT1                    <---------LBD16      <------------CBF  --------->YAB1  <---------ARR14(2)    <<<<<<<<<RAP2.2  --------->ATHB12--------->ARR14(2)   <---------TOE2(3)       ---------->DOF2 -ICU4         --------->AHL20(2)  <---------YAB1        --------->TOE2(3)                          - ------YAB1 --------->YAB1     <---------ARR11(3)        <---------MYB59                           -- ------GT1 <---------YAB1      --------->ARR11(3)     <-----------GT1 *TSS ----------->GT1     <-----   ctattcataggctatcataaaatccggaaaccagatcattttagattgggaaaaaaaaaccttactaaagacagaaaatgtaacatagcctcatgttctt  2153900                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                           --------->ANAC58                                                                                           --------->ANAC58         --------->LBD16                                                                   --------->ANAC46       ----------------->AGL2                       <----------DOF2                    ------>MYB46(1)       <---------LBD16                           --------->ARR11(3)                    ------>MYB83<-  ---------->DOF2                         ------->GAMYB     --------->ATHB12         <---------MYB46(2) ----->ZmHOX2a(1)           <----------DOF2      <---------ARR11(3)                  <---------MYB59 ------->TOE2(3)    <-----------GT1    <-----------GT1     <-------TEIL             --------->ANAC46- -----DOF2       <---------ZAT6     --------->YAB1 ------>ZmHOX2a(2)          <---------ANAC46-------   tcctaaaaccccagaaatagtattacaactcttttctatattaaccccatcgatctttcgattcatttgttctaagcattgtgtataccaaacacgaaaa  2154000 -------ARR11(3)                                                              ----------->RAV1(2) ------>ARR14(2)                  --------->AGP1                              <---------At4g35610  -- -------ARR14(2)         --------->AHL20(2)                                 <---------ALFIN1     ---- ------>ARR11(3)         <---------AHL20(2)                                <------NtERF2    <-------- -----ZmHOX2a(2)      --------->AHL20(2)        <------NtERF2            --------->PCF2    <--------- ----->ZmHOX2a(2)    --------->AHL20(2)      ------>NtERF2   =============================RAV    <--- --->DOF2        --------->AHL20(2)         <---------PCF5   ----------->RAV1(1) --------->At4g35610   gatcccttccccctaaaaaaaaaataaaaaaattcagagctagaaggggcctcatagttatagccacagttataggccccatctgctccatttttaacat  2154100                                                           <----------DOF2 ----------->GT1                                 <----------DOF2 ------->REM1(2)        <------ZmHOX2a(1)        <---------DAG2                         ----------->GT1 --->MYC3              ----------->GT1          <---------DAG2                     <------ZmHOX2a(1) ---GT1           --------->DAG2             <-----------GT1                  --------->CCA1(2) --GT1  --------->YAB1----------->GT1       --------->ARR11(3)               --------->ARR11(3) ----MYC3        ---------->DOF2            <---------ARR11(3)               --------->AHL20(1)   gtgtagaaaatcatattagaaaagtaggaaaaaatacttgagcaaagatacctttttcgacctttagaatttttgtgaatatataggaaacagaaaaaat  2154200                                    <---------ATERF1(2)                                    --------->ATERF1(2)                                   <------NtERF2                                   <---------LBD16<---------MYB52(1)                                   <---------ANAC46                                  ------>NtERF2<---------LBD16 <---------ICU4                                  <---------RAP2.3(1)          --------->YAB1                                 --------->DEAR3(1)           <---------YAB1                               <-----------HVH21 --------->LBD16 <---------YAB1       ----------->GT1    <-------TEIL<---------MYB52(1)      --------->ICU4             <---------ANAC46   <---------YAB1  >>>>>>>>>TBF1 <---------DEAR3(1)         --------->YAB1  --------->ZAT14   gggttctgatggtgacaagaagaagaaattcatcgtcgccggtagtgtctccggttttctagtcatcatggttgtctctgtagccgttgtaacgtctaaa  2154300                                                                 <---------ALFIN1                                                                --------->MYB46(3)                                                                <---------MYB55(2)                                                               --------->ANAC58                                                               --------->ANAC58                                                              ------->TEIL                                                            --------->ZAT18                                                  --------->ANAC58                                                  --------->ANAC58------>MYB46(1)                                                  --------->ANAC46------>MYB83                                            <---------MYB46(3)--------->PCF2                                       ---------->DOF2      <---------ZAT18                     <----               --------->YAB1     --------->MYB46(3)        --------->ZAT14           <---------ZAT6      ---------->DOF2--------->YAB1   --------->AtMYB61     <---------ZAT14---------->DOF2    -------   cactctcccaaagacgatgaaaatcatatcagaaaaaccaccaaagcggttcaagcagtttgtgcacccactgacttcaaagacacttgtgttaacagct  2154400  Previous    Next  AGI:  At3g06820.1    Description:  mov34 family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G80210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46054.1); contains InterPro domain Mov34/MPN/PAD-1 (InterPro:IPR000555) Range:  from: 2150853    to: 2153438    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g06830.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G49180.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44818.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 2153870    to: 2156154    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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