Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->DEAR3(1)                                                                      --          --------->DEAR3(2)                                                                       --         ------->TEIL                                                                          ------ <------MYB46(1)                                                                             -------- <------MYB83                                                                              ------>MYB46(1) -------->MYB59                                         <---------AHL20(2)                 ------>MYB83 ---------TOE2(3)                              <-----------GT1                           <---------MYB59 --ZmHOX2a(1)             <-----------GT1--------->AHL20(2)       <---------ANAC46       <---------MYB46(2)   attaggttatggaccgacgataaatgtttagccatttatgctataaattttacttcattttttttttggtgtgaatttcagagaaggcataccaaacaac  2143100                                                                                                   --                                                                                                 ----            <-----------GT1                                 <---------AHL20(2)                  ----- ------->TOE1(1)--------->TOE1(2)                           --------->AHL20(2)              <-------- ------->TOE2(1)--------->TOE2(2)                      <---------AHL20(2) --------->YAB1    --------- -->P      --------->AHL20(2)                 <---------GLK1(1)        ----------->GT1     --------->ANAC46 ->MYB46(3)<---------AHL20(2)        <----------DOF2   --------->AHL20(2)<---------YAB1  <-----------GT1   ctcgtaagaacatttaaacatatgaaatgccatcgatttctttctaagaaatcacatataatttaaatcgacgttgttataatctctcgatttactccat  2143200          <---------ANAC58                     --------->PCF2<----------DOF2          <---------ANAC58                   <---------At4g35610 --------->GT1                   --------->ANAC58            <---------DAG2 ----->REM1(2)           <---------ANAC55(2) --------->At4g35610                         <---------YAB1 ---->AtLEC2        <---------ICU4    --------->ARR11(3)    <---------ANAC58    ------>ZmHOX2a(1) -------AGL15       --------->YAB1    <---------ARR11(3)    <---------ANAC58   --------->TOE2(3) ------>AGL15      --------->ICU4--------->ANAC58 ----------->RAV1(1)       <-----------GT1         <   gtagaaaaatttccttgagaaatgatcacatgaacaagcacatcttctgctcccacaatattgcttttttgacacatatttccttatatttatgaataga  2143300                                                                                       <---------HSFB2a(1)                                                                                       <---------HSFC1(2)                                                                                       --------->HSFB2a(1)                                                     --------->ANAC58     --------->ANAC58                                                     --------->ANAC58     <---------ANAC55(2)                                                     -------->P           --------->ANAC55(2)                                                     ------>MYB46(1)      --------->ANAC55(1)  <-----                                                     ------>MYB83         --------->ANAC58     <-----   --------->ARR14(2)                               <---------ALFIN1      --------->ANAC46     <-----   <---------ARR14(2)  --------->ANAC58   <---------AHL20(2)         ================================  <---------CCA1(2)    --------->ANAC58   --------->AHL20(2)  <----------DOF2          --------->HSFC1(2) --------->LBD16----------->GT1      <---------ATHB12>>>>>>>>>MYB98  <----------DOF2 ------->TEIL --- ---------ANAC55(2)  --------->CCA1(2)--------->AHL20(2)  <---------CCA1(2)    --------->ICU4  <-----   acccgtatattttcagaaatgtgatacgaaaactcttcaatgaattatatagcccaacccataactttgggctttcacgtattaatggacccttcttgcg  2143400                               <---------ANAC58                           ------->MYC3                           -------->ABF1                           ------->MYC2                           <-------MYC2                           ------->MYC4       <-------MYC2        <-------MYC4       ------->MYC3        ------->PIF5       ------->MYC2        <-------PIF5       <-------MYC3        <-------MYC3      --------->ANAC55(2) --------->ANAC55(2)      <---------TGA1a     <---------O2                                                  =============      <---------ANAC46    <---------TGA1a                  <---------ANAC55(2)         <------ZmHOX2a(2)      <---------ANAC55(2) --------->O2                     --------->ANAC55(2)         ==============      <---------O2        <---------bZIP60(2)              <---------ANAC55(1)   ==============HOX2a_HOX2a      --------->O2        --------->TGA1a                  <---------ANAC46   ------>NtERF2     -----      <---------ANAC58    <---------ANAC55(2)              <---------ANAC58  --------->DEAR3(1) -----      <---------ANAC58    >>>>>>>>>>ABI5                   <---------ANAC58  <---------ALFIN1   <----      ===============================================MYC_MYB--------------->AtSPL8    <---------ARR14(2)      --------->TGA1a     >>>>>>>>>>AtMYC2              <---------MYB52(1) ------>NtERF2------>ZmHOX2a(2)     ------------>OsbHLH66>>>>>>>>>>HY5       --------->ANAC46             <---------ATERF1(1)*TSS ----ANAC55(1)        ----------------->PIF3(1)     <---------ATHB12      --------->ANAC46  --------- ----ANAC46          --------->ANAC58         --------->ANAC58         <-----------GT1--------->ARR14(2) ----ANAC58          --------->ANAC58         --------->ANAC58  ------------>CBF =============HOX2a_HOX2a ===============bZIP_DOF  ===========================MYC_MYB<---------------AtSPL8<---------LBD16 ------>SPL7         --------->ANAC46        ------->GAMYB<-----------------------TaNAC69(2)<-------- ----ANAC58  <---------ARR14(2)<---------ANAC58--------->LBD16--------->REM1(2)  ------>ZmHOX2a(1)   tgcgactcacgtgtgaatactgcaagacacgtggcttctctattcaacgcgcaaatcagttacgtgtacaatttatccgcctccttcggatccgaatcag  2143500                                          ----------->GT1                                   <------NtERF2       <---------AHL20(2)         --------->ANAC58      --------->AHL20(2)          ------>NtERF2      <---------AHL20(2)          --------->LBD16     <---------WOX13(1)           --------->ANAC58  ------>ZmHOX2a(1)        --------->ARR14(2) ========HOX2a_HOX2a       <---------ARR14(2) ========HOX2a_HOX2a  <-----------------AGL1                                      ----------->GT1 ---->ZAT2       <---------ICU4  --------->ATERF1(2)                              <----------ID1 ---->At4g35610<-----------HVH21 <---------ATERF1(2)                   <---------LBD16 -----At4g35610<-----------TGA1  --------->DEAR3(1)                   <---------ANAC46        ------- >ARR14(2)    --------->ANAC46  <---------LBD16                       <---------ANAC58        <------ -ARR14(2)<-----------GT1  <---------GLK1(2)        --------->TOE2(3) <---------ANAC58 ---------->DOF2   cttcctgatttatttcccgtcattacccaaattcgccggcaatgttgtaaaaatccctaatccaaaactatttcgtggattttagggaaaaaagagaatt  2143600                       --------->GLK1(1)                      --------->ARR14(2)                   <---------TOE1(2)                  <------NtERF2    <---------ICU4                                              <-----                <---------DEAR3(1)--------->ICU4            <-------TEIL              --------->ANAC58               <------NtERF2      <---------YAB1           --------->CCA1(2)          --------->ANAC58          <---------DEAR3(1)    --------->YAB1 <----------DOF2                    --------->ANAC58         <------NtERF2<---------ARR14(2) <---------GLK1(1)--------->ARR14(2)      --------->ANAC58       <---------DEAR3(1)     <---------ARR11(3)          <---------ARR14(2)--------->ANAC58  <------ -->ARR14(2) <---------DEAR3(1)<------ZmHOX2a(2)        <---------TOE1(2)   --------->ANAC58  <------ ---ARR14(2)<------NtERF2     --------->ARR11(3)     ------>ZmHOX2a(2)    <---------AtLEC2    <------   cgaacaaggtcgtcgtcgtcgtcggatttgtagatcatcatggagttctctttgatcgcagatacagtcacagtttgcacggctaagcaaggtatcgcgt  2143700                                                                   <---------YAB1                                                                 --------->YAB1                                                         <---------MYB52(1)                                                        <-------GAMYB                <---------ARR14(2)                                                       <---------ANAC58             <------ZmHOX2a(1)                                                       <---------ANAC58         <---------MYB46(3)   --------->GLK1(1)    --------->ARR14(2)          --------->ARR14(2)         --------->ALFIN1   <---------GLK1(1)    <---------ARR14(2)          <---------ARR14(2)       --------->LBD16       <- -----DOF2            <------MYB83 --------->YAB1   --------->GLK1(2)      <---------LBD16    ------- ---ANAC46            <------MYB46(1)      <----------DOF2<---------MYB46(3)--------->LBD16   ------- ---ANAC58          <--------P  --------->WOX13(1) <---------ARR14(2)     <---------LBD16     ------- ---ANAC58       <---------TOE2(3)<---------ATHB12 --------->ARR14(2)--------->WOX13(1)    --------->WRKY18(1)   ttgggaaatctcttcttcaaaggttggatttggccaatcacatttctttcgccgattccgttgttgatcatcaatctcccggtggaggaatcgttcaagc  2143800                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                   --------->DAG2                                             --------->AGP1                      ---------->DOF2                                             --------->ARR14(2)              --------->LBD16                                             <---------ARR11(3)             ----------->GT1                                             <---------AGP1                 --------->ANAC55(2)                                             <---------ARR14(2)             <---------ANAC46                                             <-----------ARR10              <---------ANAC55(2)                                             --------->ARR11(3)            ----------------->AGL3                --------->LBD16             <---------CCA1(2)              ------>ZmHOX2a(2)                <-----------HVH21           --------->At4g35610           <------ZmHOX2a(2)      --------->AHL20(2)                <-----------HVH21                --------->ARR14(2)     <XXXX     --------->ICU4                <---------ALFIN1                      <---------ARR14(2)     <XXXX --------DEAR3(1)                 --------->MYB46(3)   --------->YAB1  --------->LBD16       <------- -->ANAC46     --------->ANAC46  ====================HOX2a_HOX2a       <---------ATERF1(1) ------->TEIL -->ANAC58 <-----------GT1       =====================HOX2a_HOX2a     <---------TOE1(2) <---------MYB52(2) -->ANAC58<-----------GT1        ------>ZmHOX2a(1) <---------ARR11(3)<---------LBD16 <----------ID1   atcggcgattattttccccgtcgatgcaattgctcctccaccggtcagatctagctcttataagacaattcgccggatccgtaaaaagcgacgaaccagg  2143900         <---------ANAC46         <------MYB83         <------MYB46(1)        --------->MYB111(1)        --------->MYB52(2)        --------->MYB55(2)        --------->MYB46(2)        <---------MYB46(3)        <---------AtMYB61             <---------AtMYB61        --------->MYB111(2)        --------->GLK1(2)                                                <       <---------MYB55(1)         --------->ARR11(3)                                              <--      <---------MYB52(1)          <---------ARR11(3)                          <---------DEAR3(2)  <--    <---------ANAC46   ----------->HVH21                               <--------P<-------TEIL     ---    <---------ANAC58   ----------->TGA1                              <---------MYB46(3)          <---    <---------ANAC58 --------->At4g35610                             --------->MYB55(2)          ---- XXXXXXXXXXXXXXXXMIR399E       <------ZmHOX2a(1)                    <---------AtMYB61    <---------ARR14(2) XXXXXXXXXXXXXXXXMIR399F    <-----------RAV1(2)                     --------->ALFIN1     --------->ARR14(2) ----RAV1(2)         <---------At4g35610 ---------->ID1  ----------->GT1 --------->DEAR3(2)    <-----   cgagtttcgtttggtggagatggagatgacgcaggagattttggtcgttttctgttagaaggtgatttcggtggtagcgacggtccatttggatttggag  2144000  Previous    Next  AGI:  At3g06780.1    Description:  glycine-rich protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN69222.1) Range:  from: 2143494    to: 2144527    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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