Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->ANAC46                                              --------->MYB52(1)                     --------->ANAC58                                   ------>ZmHOX2a(1)                     --------->ANAC58                               <---------ARR14(2)                     --------->ANAC55(2)                            --------->ARR14(2)                  <---------SPL7                                   <---------CCA1(2)  --------->ATHB12                 <---------ANAC58                                  --------->GLK1(1) <---------YAB1                 <---------ANAC58                               <-------TEIL       <---------DOF5.7(2)            <---------ICU4  <-----------GT1      <---------------AGL15 --------->TOE2(3)            --------->YAB1--------->ICU4         ====================================================   agacataatgctgatcatgacttacgaaattatcaacttgaaatgaattgactataagtagacaggctcatatcctaagtatagataacgattgtatcaa  2132400                                                       <-------GAMYB          --------------->AGL15            --------->ZAT14         <-----------------AG              <---------ZAT18         ==================================MADS_MADS  --------->MYB55(2)         <-----------------AGL2            --------->ZAT18         ----------------->AGL3 <---------TOE2(3)     --------->MYB52(2)                         ----         <-----------------AGL1 --------->MYB59       --------->MYB111(2)                        <---     --------->AtMYB61          <---------TOE1(3)     <---------MYB46(3)                        -----     --------->YAB1      <-----------------AGL1       <-----------RAV1(1)                     <------   -------->P            <-----------------AG     <---------ZAT6                             <-------  <-----------GT1  <-----------HVH21       <---------ZAT14<------MYB83                     -------->P  --------->WOX13(1)    --------->MYB52(1)--------->ALFIN1<------MYB46(1)                 <---------- =========================MADS_MADS     <---------ANAC46  <---------MYB46(3)          <-----------GT1   ctatcaaccataccaatttagggtcataccggtttaggtttggagtggactagtgtttgttggttttttgatactccattttagtattttactaaccttt  2132500                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                                  <---------ANAC46                                                                      --------->YAB1                            --------->TOE2(3)               ------>ZmHOX2a(1)    <---------LBD16                         --------->GLK1(2)                 --------->TOE2(3)  ---------->DOF2 ----->AHL20(2)         <---------GLK1(2)               --------->GLK1(2)   --------->AHL20(2) ------AHL20(2)       <---------TOE2(3)                <---------GLK1(2)    <---------AHL20(2) ---->AHL20(2)        <---------TOE1(3)            ---------->DOF2--------->AHL20(1) ----DOF2         <----------DOF2               --------->AHL20(2)--------->AHL20(2) --DAG2      <---------ATHB12------>ZmHOX2a(1) --------->AHL20(2) <---------AHL20(2)------>NtERF2 -GT1 <----------ID1  <---------YAB1       --------->AHL20(2)    --------->AHL20(2)--------->LBD16 <-   taattcaagggacaaatcaactttaagattcctaaaattgttgaaaaaaataaaaaagattcctaaaattaattagaaataaatgcgggcagtttcaatt  2132600                                    ------->MYC2                                    ------->MYC3                                    <-------MYC2                                    ------->MYC4                                    <-------MYC3                                    <-------MYC4                                   <---------O2                                   --------->O2                                   --------->ANAC55(2)                                       <-------                                   ==========================MYC_MYB            --------->YAB1-------                 <---------AtMYB61 --------->TGA1a   ------->GAMYB             <---------ATHB12------         --------->ANAC58          <---------TGA1a  --------->ANAC58    <------MYB46(1) ------>MYB83         --------->ANAC58  ------>MYB46(1)          --------->ANAC58    <------MYB83    ------>MYB46(1)       --------->MYB52(1)  ------>MYB83----------->HVH21             <---------MYB52(1) --------->MYB52(1)      <------ZmHOX2a(1)   --------->MYB52(1)        <---------MYB52(2) --------->MYB59<---------MYB59 ----------RAV1(2)       --------->AtMYB61  --------->YAB1       ------>ZmHOX2a(1)    --------->AtMYB61   ctcaggcaggaacggacttgtggtagaccaacgttacacgtgtgaagcatagcaacgaaaccacttcctctgttcggtccaatcgaaaccaaaccgcgtg  2132700                                                                                                   <- --ANAC46                                       ----------->GT1                         ------>ZmHOX2a(1) -->LBD16         <-------TEIL     --------->YAB1                                      <---------ANAC58 ----->HVH21---------->DOF2    --------->AHL20(2)        ----------->GT1               <---------ANAC58   aaacgactgaaaatcaaaggtgcaaaactataaataaacataaaactcgagggtataacaggtagaaacaaaacgttgtcttcttgtgtccttgtccgaa  2132800       <------MYB83       <------MYB46(1)       ----------->GT1                      <----------DOF2      --------->MYB46(2)                   *TSS      --------->MYB59                      <---------DAG2 <---------------AtSPL3                 <---------ALFIN1 --------REM1(1)  <----------DOF2 <<<<<<<<<TBF1 <-----------GT1   gttgtagttcggtaacaagtctttcgcttccatttcttcttcccaccttttctctctctctctctctctctctctctctctctctctctctctctctctc  2132900                                                                        --------->CCA1(2)                                                                       <---------ARR14(2)                                                --------->TOE2(3)      --------->ARR11(3)                                          <----------DOF2              --------->ARR14(2)                                        <------NtERF2                 <------ZmHOX2a(1)  ============                                       ------>NtERF2                  ==========================HOX2a_HOX2a                 <----------DOF2     ---------->ID1            --------->GLK1(2)         <------ZmHOX2a(2)     ------>ZmHOX2a(1)             <-----------RAV1(1)  ------>ZmHOX2a(1)                ============   taccgtccttctagggtttctttgatcacattcaaatttgtcgcctttaatctcaatcctgtaagaatcagaggatatggattccaattggatcaattgt  2133000                                                        <---------LBD16                                                    <---------GLK1(2)                                                 <-----------RAV1(2)                             --------->HSFB2a(2)=====================================HOX2a_HOX2a                  ------>ZmHOX2a(1)            <-----------HVH21              <------ZmHOX2a(1)                  =====================================HOX2a_HOX2a           <---------YAB1            ------>ZmHOX2a(1)<---------HSFB2a(2)<------ZmHOX2a(2)     <---------ANAC58        <-----------GT1 <<<<<<<<<TBF1        --------->LBD16          <---------ANAC58       <------- ========================HOX2a_HOX2a    --------->WOX13(1)          <-----------GT1      <---------ANAC46 ==================HOX2a_HOX2a       <-----------HVH21<-------TEIL <<<<<<<<<<GT-3b    --------->ALFIN1   ccctctgttttctcctcatcctcttcttcttccagacgctgtcaatcccgatcaggttcgcgcgtctatttttcttgttaggattcaagtggtgtttgtt  2133100                                                                          ------>ZmHOX2a(2)                                                                         ===============HOX2a_HOX2a                                                                         <------ZmHOX2a(2)                                                                        --------->ARR11(3)                                                                        --------->ARR14(2)                                                                        <---------ARR11(3)                                                                        --------->GLK1(2)                                                                        <---------ARR14(3)                                                                        --------->ARR14(3)                                                                        <---------ARR14(2)                                                                        <---------AGP1                                                                       <------ZmHOX2a(1)                                                                   <---------TOE2(1)                                                                   <---------TOE1(1)                                                                  --------->SPL7                                                                <---------SPL7                                                              <---------------AtSPL8                                                            =====================HOX2a_HOX2a                      ------>ZmHOX2a(2)                     ====================HOX2a_HOX2a                    --------->ARR11(3)                      <------ZmHOX2a(1)    <------ZmHOX2a(1)      <---------AtMYB61<----------DOF2                   ========================HOX2a_HOX2a    <----------DOF2 <---------ARR11(3)   <------NtERF2   <------ZmHOX2a(1)==============HOX2a_HOX2a --MYB46(3)      <---------WOX13(1) <---------AtMYB61    =======================HOX2a_HOX2a   cttaggctttggtcatgagattgatcttttgaagttttttggtggcagacttgtatttaggaggagggtacgaggatcttgaaggagaagacgatttgaa  2133200                             <---------ARR14(3)                                                     -                             <---------GLK1(2)                                                      -                             --------->ARR11(3)                                                     <                             <---------ARR11(3)                                                     <                             --------->ARR14(3)                               <---------REM1(1)    <-                      --------->At4g35610                              --------->ARR11(3)          --                      <---------At4g35610                             <---------HSFB2a(1)         ---               <----------DOF2         <-----------RAV1(1)   --------->YAB1------>ZmHOX2a(1)      <-- <------NtERF2 <---------DAG2<---------ARR14(2)<----------DOF2        --------->HSFB2a(1)    --------   ggcagagtttatatgccctttttgcgctgaagattttgacattgttgggctttgttgtcacattgatgaagaacatcctgttgaagccaagaatggggta  2133300  Previous    Next  AGI:  At3g06760.1    Description:  Identical to Protein DEHYDRATION-INDUCED 19 homolog 4 (DI19-4) [Arabidopsis Thaliana] (GB:Q8VXU6;GB:Q9M7Y2); similar to HRB1 (HYPERSENSITIVE TO RED AND BLUE) [Arabidopsis thaliana] (TAIR:AT5G49230.1); similar to fiber protein Fb2 [Gossypium barbadense] (GB:AAN77145.1); contains InterPro domain Drought induced 19 (InterPro:IPR008598) Range:  from: 2132843    to: 2134562    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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