Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                                <----                                                                                                <----                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                       <---------GLK1(2)                                                                                       <---------ARR14(2)                                                                                --------->MYB46(3)                                                                                --------->HSFB2a(1)                                                                                <---------HSFC1(2) <-                                                  <------ZmHOX2a(1)             <---------HSFB2a(1)--                                      <---------ARR14(2)                       <---------KAN4(2)-----                                      <---------ARR11(3)                     ==============HOX2a_HOX2a                                      --------->ARR14(2)           ----------->GT1     --------->ARR14(2)            <---------ARR14(2)        --------->KAN4(2)           --------->ANAC58  ------>ZmHOX2a(2)            <---------GLK1(1)         --------->ARR11(3)          --------->ANAC58 <------ZmHOX2a(2)            --------->GLK1(1)        <---------GLK1(1)     ----------->GT1   <------ZmHOX2a(1)<------      <------ZmHOX2a(1)              <---------KAN4(1)  --------->YAB1       =============HOX2a_HOX2a --------->DOF2                     ---------->TaMYB80 <---------YAB1      <---------TOE2(3) -------- ----------WRI1            --------->DEAR3(1)  <------ZmHOX2a(1)--------->MYB52(1)--------->MYB52(1)<   agcaaagaggagagaattctgtaaacgagccgagcctgaatatccctgaggaggagtatgatagtaaaacggaaaataaggaacgatcggattcggtggt  2129900                                                             --------->SPL7                                                             --------->SPL1(2)                                                            <---------SPL1(1)                                                            --------->SPL1(1)                                                           <---------SPL7                                                           <---------SPL1(2)                                                         --------->RAP2.3(1)                                                         <------NtERF2                                                        ------>NtERF2                                                        --------->ABI4(1)                                                        <---------ATERF1(1)                                                        <------------------SPL14                                                       --------->RAP2.3(2)                                                       --------->RAP2.3(3)                                                       --------->RRTF1(3)                                                       --------->DEAR3(1)                                                       ------------------>SPL14                                                       --------->ANAC46                                                      --------->ATERF1(1)                                                      <------NtERF2  --------->LBD16                                                      --------->RAP2.6(1)        --------->LBD16                               --------->ORA47(2)       <---------ANAC55(2)                            --------->RRTF1(1)       --------->ANAC55(2)                            --------->RAP2.3(1)       --------->ANAC58                               --------->ERF1<---------ANAC58       --------->ANAC58                              ------>NtERF2  <---------ANAC58      <---------LBD16                                <---------RAP2.3(1)   <-----------HVH21                                 <---------ATERF1(1)          --------->DEAR3(1) ------MYB46(3)                                     --------->DEAR3(1) <---------MYB52(1) -----AtMYB61                                       <---------DEAR3(1)----------->GT1      <--------- -----DEAR3(1)                 <------NtERF2       --------->ATERF1(1)<------NtERF2      --------->ZAT2 -->MYB55(2)                 <---------ANAC46      <------NtERF2 <---------DEAR3(1)--------->MYB52(1) --AtMYB61                  <------NtERF2------>NtERF2--------->DEAR4(2)          --------->AtMYB61 --DEAR3(1)                 --------->ATERF1(1)   <-----------HVH21 <---------ANAC46<---------LBD16 = --------AtMYB61          --------->ALFIN1        <---------ATERF1(1)<---------MYB46(3)  <---------ZAT2 ------->ALFIN1           <---------DEAR3(1)     --------->DEAR3(1)--------->ATERF1(1)--------->LBD16 ---->ALFIN1     --------->LBD16        --------->DEAR3(1)--------->DEAR3(1)   --------->ZAT6       < ---MYB46(3)    <---------ANAC46       --------->MYB46(3)--------->ATERF1(1)   --------->ANAC46  ==== ->ALFIN1   <---------WOX13(1)----------->GT1   --------->ATERF1(1)<------NtERF2  <---------ALFIN1--- ---------MYB46(3)       <------ZmHOX2a(1)<------NtERF2<---------DEAR3(1)    <-----------GT1     <---   ggtggtgtcccgtaattgccgtagtaaggaggcggataatagccaccgtagccgtcgccgccgtacggaggcgggtatttaacaccaccggagcttgaag  2130000                                     --------->ZAT2                                  --------->LBD16                                <---------LBD16                                <------NtERF2                               ------>NtERF2                               --------->MYB52(1)                            --------->ABI4(1)                            ------>NtERF2                           --------->DEAR3(1)                           --------->ANAC46                           --------->ANAC58                           --------->RAP2.6(2)                           --------->ANAC58                           --------->DREB2C(2)                           --------->DEAR4(1)                           ------->GAMYB                         <---------At5g28300                      --------->CCA1(2)                      <------ZmHOX2a(2)                      ====================================HOX2a_HOX2a                     <---------ARR11(3)                     <---------ARR14(2)               <---------ICU4 <---------ALFIN1           <------ZmHOX2a(1)               --------->YAB1 --------->DEAR3(1)       --------->ALFIN1            --------->YAB1--------->MYB46(3)        --------->ALFIN1         ----------->GT1<---------ALFIN1         --------->ALFIN1      =======================HOX2a_HOX2a        --------->ATERF1(1)   ==========================HOX2a_HOX2a        <------NtERF2   <------ZmHOX2a(1) --------->ARR11(3)       <---------ANAC58 --------->ALFIN1    --------->ARR14(2)<----------DOF2<------ZmHOX2a(1) -DOF2<------ZmHOX2a(1)--------->MYB46(3)     <---------ANAC46 ============================HOX2a_HOX2a      <---------ANAC58 ------ZmHOX2a(1)    --------->AGP1  <---------ZAT2<------ZmHOX2a(1)                       <---------ANAC58 ============================HOX2a_HOX2a      <---------DEAR3(1)           ----------->HVH21 ------>ALFIN1<---------YAB1<---------ATERF1(1)--------->LBD16 ----------->GT1             <---------ANAC58 ---ZmHOX2a(1)--------->ICU4<-----------HVH21<---------LBD16<------ZmHOX2a(1)    <------ZmHOX2a(1)   gaggaggaggagagtaataataagatccaccgccaccggagcttgatggcggaggaggaggaggagagtaagaagatgggacaggattacatggattgtc  2130100                                                                                               <-----                                                                                               ------                                                                                               <-----                             <---------ANAC58  ---------->DOF2                     <<<<<<<GRF7 ------                  --------->ANAC58           <---------------AGL15               ----------->HVH21                  --------->ANAC58------>ZmHOX2a(1)      ----------->HVH21    <---------ARR11(3)   --                  --------->ANAC46<----------DOF2      ----------->GT1        --------->ARR11(3)  <--    <------ZmHOX2a(1)        <---------ANAC58--------------->AGL15      --------->YAB1        <------   gcaagaggaacacattgtgcaagaaacagtttcgtcctttgaagtcactaaaagaggcagtgacattaagagaataagaagacctgacaaattagagaat  2130200      >>>>>>>>>>>>>>>>>LFY    <---------ANAC58    <---------ANAC58 <---------WOX13(1) ----ARR14(2)                                                        --------->ANAC58 --->ARR14(2)                                                        --------->ANAC58 ------ARR10                                                  <---------ANAC55(2) --->GLK1(2)                                                  ----------->GT1 ------->ATHB12                                        ---------->DOF2 <------ZmHOX2a(1) -------YAB1                           --------->At4g35610    --------->ANAC55(2)    ---------->DOF2 ---GLK1(2) <-----------HVH21----------->HVH21 --------->CCA1(2)     <---------TOE2(3)       --------   ctgattgcttccattgtcagaaatttgttgtctgacaaatgagctagagatttggactaaagtcaagtgataaggaagagagaagatgaaagaagaaaag  2130300                                                                             <---------AHL20(1)                                                                             <---------AHL20(2)                                                                             --------->AHL20(2)                                                                             --------->AHL20(1)                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)                                                                           <---------YAB1                                                                         -------->ATHB1                                                                         <---------ICU4            <-                                                                        <---------AHL20(2)         --                                                                        <---------ATHB51           --                                                                        --------->ICU4             <-                                                                        --------->AHL20(2)         --                                                                     <---------AHL20(2)           ---                                                                    --------->AHL20(2)            <--                                                               <---------GLK1(2)                <----                                                        ------->TEIL<---------AHL20(2)         ------                                                <------------CBF<---------RVE1(1)              <-----                                               --------->ATHB12--------->ARR11(3)              ------                                   --------->ALFIN1 <---------TOE2(3)--------->AHL20(2)      --------                               ---------->DOF2<---------YAB1   <---------ARR11(3)     <------------CBF                     *TSS  --------->YAB1    <----------DOF2 <---------TOE2(3)   ----------->GT1----- -->DOF2           <---------At4g35610   ------>ZmHOX2a(1)   <---------TOE1(3) <------------CBF<-----   agagagagaagaagcacattcagaggctagaataaaagtgttcctctctttattgacgaatttaagatttttaaattattaaattgtttattgaaaaata  2130400 --------ICU4 ------->AHL20(2) ------->ATHB12 --------AHL20(2)          ---------->DOF2 ------->ATHB51           <---------AHL20(2) ------>ICU4            --------->CCA1(2) -------YAB1           <---------ARR11(3) -----ICU4             --------->ARR11(3) --->ICU4           <---------TOE2(3) ----AHL20(2)      ---------->DOF2                                                             <----- --->AHL20(2)    <---------YAB1                                                                ------ ->YAB1       --------->ICU4                                              ------->TEIL --------->ARR11(3) ---->YAB1    <---------YAB1 <---------TOE1(3)                   --------->DAG2        <---------ARR11(3) ----ATHB51<---------MYB52(1)<---------TOE2(3)                  ---------->DOF2        --------->AHL20(1)   attatttgttttcgttattattaaagatttaaaggttatgcacaatttgttttgtccaaaaaaaaaaaaagttatgcacatttgccatatatattcgtat  2130500                        <----------DOF2        --------->ARR14(2)        <---------ARR14(2)                   <----------DOF2        <---------ARR11(3)     <---------ARR14(2)                                                   <        --------->ARR11(3)     <---------ARR11(3)     <---------AHL20(2)                     <-------        --------->GLK1(2)      --------->ARR11(3)     <---------YAB1                         --------       <---------ARR14(1)      --------->ARR14(2)   --------->CCA1(2)                        -------- ----ARR14(2)        <-----------GT1      <-----------GT1           <-----------RAV1(1)      <------- --->ARR14(2)     ----------->GT1         <---------AHL20(2)<----------DOF2         ------>ZmHOX2a(2)   acttagacagtatcttgaaaatgttactttcaatatctgtaaatttactttcagatataattctttagttttgttggaaaatttgatcgcatgaaataat  2130600      --------->MYB52(1)                                         ------->MYC3    <---------MYB52(2)                                           <-------MYC3   --------->ZAT2                                             <---------ALFIN1   --------->At4g35610                               --------->ANAC46   <---------At4g35610                  ----------->GT1  ------>NtERF2 ---------At4g35610           --------->ANAC58      <---------LBD16 --ATHB51                     --------->ANAC58     --------->MYB52(1)                              <- ->ICU4 --------->MYB46(3)<-----------GT1  ---------->DOF2   -------->P                         ----- ->AHL20(2)       <-----------GT1      --------->DAG2--------->ANAC58              <---------HSFB2a(1) --AHL20(2)  --------->AHL20(2)       ---------->DOF2--------->ANAC58              --------->HSFB2a(1)   tcatcagctaacaaatgaaataacaaatttacaggcactaaaaagtaaagaacacacggagccaacacgtttgacttctagccgaaggtttgtgtaataa  2130700                                                           <---------YAB1               --------->At5g28300                       --------->YAB1              ----------->GT1                           <------ZmHOX2a(2)         ---------->DOF2                               --------->ARR11(3)       ---------->DOF2          <-----------------------TaNAC69(2)    --------->AHL20(2)   ----------->GT1          --------->YAB1             <---------ARR11(3)                       ----- --------ABI4(2)     <-----------HVH21       ---------->DOF2      <----------DOF2             <------ ----->DOF2 <---------LBD16 ----------->GT1--------->TOE2(3)<---------ICU4        <---------ANAC46  -   aagcaccgaaaaaacgcggtaaatgtcaaatggtaatgtgttcaacctaaagtttgagatcatcattcctttttatatatgaagtcgtatagatgacttt  2130800  Previous    Next  AGI:  At3g06750.1    Description:  hydroxyproline-rich glycoprotein family protein Range:  from: 2129629    to: 2130321    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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