Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <---------MYB46(3)                                                                             <------MYB46(1)                                                                             <---------DEAR3(2)                                                                             <------MYB83                                                                             ----------->GT1                                                                            <---------DEAR3(1)                                                                         <------MYB46(1)                                                                         <---------MYB46(3)                                                                         <------MYB83   <---------ZAT14                                                                         --------->MYB55(2)                                                                        --------->ALFIN1<-------TEIL                                    <---------ARR14(2)                  <---------AtMYB61                              --------->ANAC46                       --------->LBD16    --------->ZAT14                       ----------->GT1                              <---------ANAC46<---------------AtSPL8               <---------At5g28300--------->LBD16                  <---------LBD16 ---------->DOF2 ------>WOX13(1)      --------->ICU4--------->ARR14(2) <-----------RAV1(2) <---------ORA47(1)       -   cagtcagagtctagtttcactgccatggttatactccaggtctggtctggtctggtctcagaggtttgtaccgggtggtcggtttaaaagtacagcgtct  2123800                                                       <---------ANAC58                                                       <---------MYB46(3)                                                       <---------ANAC58                                                     <-----------HVH21                                                     <---------MYB52(1)                                               --------->SPL7                                    <---            <-------TEIL                       <---------ZAT14                   <---------AHL20(2)         <------MYB46(1)                  <---------ANAC46                      --------->AHL20(2)         <------MYB83                   --------->ATHB12               <-----------RAV1(1)   <-------GAMYB        --------->MYB59                ----------->HVH21      --------->ETT(2)  <---------AHL20(2)--- --------->DOF2               <---------AHL20(2)<---------ALFIN1   <----------DOF2          ---------   gagaaagtgtttggttcattgtccagggctatttttttgaaatgactggtacaccggtcgtgagtcgacctttgtgttgtttttaaattttggagggtta  2123900                                                         --------->AHL20(2)                                                         <---------AHL20(2)                      <---                                                   <-------GAMYB                                 <---                                                   ----------->GT1                               <---           <---------ZAT14                        <---------DEAR3(2)                             <---           --------->ZAT14                        ----------->GT1                               -----      <---------At5g28300                         <---------MYB46(3)                            <----     <<<<<<<<<<<<<<<<<LFY                        <---------DREB2C(2)          --------->ATHB12  <---- ------YAB1<---------ZAT18                       <---------ANAC46           <----------DOF2     ----- ------>YAB1     <----------DOF2              <-----------RAV1(1)  --------->TOE2(3)        <-------- -->GT1   --------->ALFIN1                  <---------AtLEC2       --------->TOE1(3)       <---------AHL20(1)   taaaaacttacagtggagtcttttgtttttgtgttgacaacagtttgtatgtcggttaaaaaattgaaaccataaaccctttattggtcttaatatgttt  2124000                                                                                             --------      <---------GLK1(1)                                                                      <------- ---MYB83  ------>ZmHOX2a(1)                                                      <----------DOF2 ---MYB46(1)                                                                   <---------ARR11(1) ------ANAC58                                      ----------->GT1             --------->GLK1(2) ------ANAC58                                  <------ZmHOX2a(1)               ------->TEIL --------- ---->MYB46(2)     ----------->GT1           <---------TOE2(3)                 --------->ARR14(2) -----AtMYB61<---------TOE2(3)              --------->MYB52(1)                 <---------ARR14(2) -----MYB46(3)    --------->DAG2          --------->TOE2(2)                   <---------ARR14(1) ---->MYB111(1)<------ZmHOX2a(1)     <---------WRKY38(1)                      <---------CCA1(2) -YAB1--------->GLK1(1)             --------->WRKY18(1)              ---------->DOF2<---------AHL20(2)   ggtgtctgatttcctaaggaaaggtttttttttttttggtcaaacctaaggaagggtttatcttcgagttataaagactcgaatctttatttgaattatg  2124100                                   ------->TEIL                                <---------YAB1                              --------->YAB1                             <---------YAB1                           --------->YAB1                           -------->ATHB1                           <---------ICU4                          <---------ATHB51                          --------->ICU4                            <----------ID1                          <---------AHL20(2)                 ----------->GT1                          --------->AHL20(2)          --------->ANAC58                       --------->AHL20(2)             ----------->GT1    --------->ANAC58 ---------->DOF2       --------->AHL20(1)     ----------->RAV1(2) ---------->DOF2 ->YAB1                <---------AHL20(1) <---------DAG2--------->AHL20(2)              <---------YAB1 --ICU4                <---------AHL20(2) <----------DOF2  <------------CBF<---------ARR11(3) >ICU4                <---------ATHB12 <-----------GT1--------->ANAC58   --------->ANAC58   aagtaaagtatacataaaacagcaataaattattatgaatttgactttacctgagcaagtaaattgtaaaaagacaagaactaatgaactattagtatat  2124200                                                           <---------At4g35610            <---------DAG2                        <---------ICU4      --------->GLK1(1)           <--            <----------DOF2                      --------->ICU4 --------->GLK1(1)               -----       <------------CBF             ----------->GT1        --------->At4g35610                 ------    ------------>CBF   *TSS      ---------->DOF2 <---------ATHB12     <---------GLK1(1)        <-----   gtccagttcaattgccttatcgtctaaaacccctcaaaagctaaaactgaaatcattttgaagcagaaatcgatttccaaaatggctcttgttcaatcca  2124300                                                                                               ------                                                                                               <-----                       --------->DOF5.7(2)                                                    -------                       <---------MYB52(1)                                                    --------           --------->TOE2(3)                                                                <--------          --------->ANAC46                                                                  ---------        --------->ANAC46                                                                  <--------P        <---------ALFIN1 <---------DOF5.7(2)                                       ----------->HVH21 <---------DAG2       <-------GAMYB                                             --------->ARR14(2) -- <----------DOF2  --------->ANAC46       ------>ZmHOX2a(1)                     --------->GLK1(1) ---- -------ARR11(3)--------->ZAT6   --------->GLK1(2)                             <---------GLK1(1)<---- ---->LBD16--------->AtMYB61    --------->ARR14(2)                      --------->LBD16  <---------MYB52(1) --->HSFB2a(2)  <---------ALFIN1<---------ARR14(2)                    <---------LBD16--------->MYB52(1) ----HSFB2a(2) --------->ZAT14  <---------GLK1(2)                <----------DOF2<---------ARR14(2)<--   gaacttttccacacctcaacactccgttatcgccgattctatcctccctccatgctccgtcttctctctttatccggagggaaatccgaccggtagccgc  2124400                       <---------HSFC1(2)                       --------->HSFC1(2)                     --------->ARR14(2)                    <------NtERF2                  --------->RAP2.3(2)                  --------->RAP2.6(2)                  --------->LBD16                --------->ABI4(1)                        <---------HSFC1(2)                ------>NtERF2                         ---------->DOF2               --------->DREB2C(2)                 <------NtERF2               --------->DEAR3(1)                  <---------HSFB2a(2)       ------>ZmHOX2a(1)                           --------->LBD16 <---------MYB52(1)--------->LBD16               <---------DEAR3(1) >NtERF2       ------->GAMYB                     --------->SPL7 ----ABI4(2)   <---------ALFIN1                <-----------HVH21        ------>NtERF2 -->DEAR3(1)  --------->DEAR3(2)          <---------DOF5.7(2)          --------->DEAR3(1) ->ATERF1(1) <---------ATERF1(1)         --------->WRKY38(1)           <---------ALFIN1 -At4g35610 <---------ALFIN1             --------->WRKY12--------->HSFC1(2)     <------NtERF2 >At4g35610 --------->AtMYB61            ----------->HVH21           ------>ZmHOX2a(1) ------->DEAR3(1)<---------LBD16        --------->DOF5.7(2)      <-----------HVH21 -->NtERF2------>ZmHOX2a(1)             <---------MYB52(1)<---------GLK1(2)  <---------LBD16      <-- -----DEAR3(1)--------->MYB46(3)       <-------GAMYB--------->ANAC46 <---------ATERF1(1)        ----- ----NtERF2--------->MYB46(3)      --------->ANAC46--------->HSFB2a(2) --------->ANAC46 <-----------HVH21   gccgttctcctcctccaccgccggaaacttgcccttctcgccgttgacgcgtccgcgaaagcttctctgtcctccgcctcgcggcaagtttgtcagagaa  2124500            --------->ANAC58            --------->ANAC58           --------->SPL7         <---------SPL7       <---------------AtSPL3       --------->ANAC46       <---------------AtSPL8       --------->ANAC58 <---------ARR11(3)                 --------->ANAC58     ---------->ID1     <---------YAB1 --------->ARR11(3)        <---------DAG2        <---------ARR11(3) --------->AHL20(2) -------GLK1(2)            <----------DOF2    ----------->RAV1(1)   <---------AHL20(2) ------>ARR10          ---------->ID1      --------->ANAC46         <---------AHL20(1)     <---------   gattatcttgtggtacggacaatttctcgctttctctcacgctccaaacaacatattttgtcgatttcaaaaaatttcatgtttgttttcgttttacgac  2124600              --------->HSFB2a(2)                                                              <-----              <---------HSFB2a(2)                                                              ------             <---------LBD16                                                                   <-----          <----------DOF2                                                             <-------TEIL --         <----------DOF2                                                             --------->CCA1(2)         <---------DAG2                            <---------AHL20(2)                --------->ARR14(1)        ----------------->AGL1              ----------->GT1                         --------->ARR14(2)     ---------->ID1                      <---------REM1(1)                          <---------ARR14(2) <----------DOF2              <---------ANAC58    --------->AHL20(2)                --------->ARR11(1) <---------DAG2--------->LBD16<---------ANAC58   <---------YAB1        <---------MYB46(3)      ------ --GT1<-----------GT1       <---------MYB46(3)--------->ICU4          <--------P    <---------GLK1(2)   ttcctttttcgcctttctgggaaattaagttggctgggcatagatgtagttattatataagaacgatatatggtagttctatcaaagattcgaccagtac  2124700  Previous    Next  AGI:  At3g06720.1    Description:  AT-IMP (Arabidopsis thaliana importin alpha); protein transporter. Identical to Importin subunit alpha-1 (KAP1) [Arabidopsis Thaliana] (GB:Q96321;GB:O49599;GB:O81520;GB:Q940R6;GB:Q9C841;GB:Q9ZRI5); similar to importin alpha-1 subunit, putative (IMPA4) [Arabidopsis thaliana] (TAIR:AT1G09270.2); similar to importin alpha-2 subunit, putative [Arabidopsis thaliana] (TAIR:AT1G02690.1); similar to importin alpha-1 subunit, putative (IMPA4) [Arabidopsis thaliana] (TAIR:AT1G09270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44871.1); similar to Impa2 [Nicotiana benthamiana] (GB:ABM05488.1); similar to unnamed protein product [Vitis Range:  from: 2120330    to: 2124137    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g06730.1    Description:  thioredoxin family protein. similar to ATY2 (Arabidopsis thioredoxin y2), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT1G43560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42813.1); contains InterPro domain Thioredoxin family (InterPro:IPR015467); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain (InterPro:IPR013766) Range:  from: 2124223    to: 2126148    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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