Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------MYB46(3)                                            --------->YAB1                      <---------ANAC46                                          <---------MYB52(1)                     <------NtERF2                                             <-------GAMYB                    ------>NtERF2                                             --------->MYB52(2)                    <---------ATERF1(1)          <-------TEIL               <---------MYB52(1) <-----                   --------->ATERF1(2)  <---------RAP2.6(2)             ------>ZmHOX2a(2)     <------                   <---------DEAR3(1)   <---------ANAC58              --------->ARR11(3)  <---------TOE1(2)                   <---------ATERF1(2)  <---------ANAC58              <---------ARR11(3)  <---------TOE2(2) ------ZAT2       <---------ORA47(1) <---------WOX13(1)             <---------YAB1  <----------DOF2 >GAMYB<---------ANAC46<-------GAMYB<---------ANAC58      --------->AtLEC2 <-----------TGA1   ------- >ANAC58   <---------CCA1(2)        <---------ANAC58      --------->ANAC58 ------------>AtMYB77<----- >ANAC58 <---------MYB52(1)        --------->ATHB12       --------->ANAC58 <-----------HVH21 <-------   gctattgagccgtttatctggccggcgttgttagccttgattgcggtctggttcatggccaagcaaacttatgatctcgtcagttactttcataggttgg  2119900                                                  <---------ARR11(3)                                                  --------->ARR11(3)                               <---------ZAT14   <---------GLK1(1)                        ---------->DOF2          --------->GLK1(1)                    <------MYB83                <---------ARR14(2)                    <------MYB46(1)             <---------ARR11(3)                    <---------MYB46(3)          --------->ARR11(3)                              <---- -MYB83 ------>ZmHOX2a(2)      <---------ZAT18  --------->ARR14(2)                        --------->MYB52(1) ---AtMYB61         <---------DEAR3(2)       <---------TOE2(3)                         --------->ANAC58 -->MYB59           ----------->GT1    ----------->HVH21                       --------->ARR14(2)   - -MYB46(1)<---------MYB52(1)   --------->ZAT18 <------ZmHOX2a(1)    <-----------GT1    --------->ANAC58 -P  --------->ATHB12<-------GAMYB  --------->GLK1(2)         ----------->GT1  <---------ARR14(2)  <-   tcttcgatgatcggtatgtagtcggttaaagagtggacaatctgactgaggatatctcgctagagagaaataactaatccatatatgacaaacaacgact  2120000                                                                                           --------->ARR11(3)                                                                                           <---------ARR11(3)                                                                                          --------->YAB1         <----------ID1                                                              --------->YAB1         ----------->GT1                                                       --------->TOE1(3)        ----------->GT1                                                        --------->TOE2(3)      ---------->DOF2                                                         --------->ANAC46 ------DOF2                                      ---------->DOF2             <-------TEIL<---------YAB1 -------->ATHB12                      <-------TEIL--------->DAG2--------->MYB46(3) <---------YAB1 --------YAB1    ----------->GT1  <---------TOE2(2)----------->GT1   <---------ARR11(3)  <---------TOE2(3)   tttcattggaaaggaaaaaatgtataaacacaaacgtagattcaaaactcaaaaagttatatagtaaccaaggtctatatacgttaatattaagataatc  2120100                               ------>ZmHOX2a(2)                             <---------ARR14(3)                             --------->ARR14(3)                             --------->ARR11(3)                             <---------ARR11(3)                             --------->ARR14(2)                --------->AtLEC2                              --------->TOE2(3)                <---------YAB1<------ZmHOX2a(2)   ---------->DOF2          ---------->DOF2  --------->ZAT14            <---------ARR14(2)--------->CCA1(2)        --------->TOE2(3)           -  <---------ZAT14           <------ZmHOX2a(1) --------->ARR11(3)   <---------ANAC58           -------  <---------ZAT18       ---------->DOF2       <---------ARR11(3)   <---------ANAC58    --------->YAB1   gcagtccacttgtaagtcatgaaaacaaaaggatcttcaaattgttgagatataaagaagaatacattagcttgcctcaaagaacacaatagtaaggggc  2120200               ------>MYB83             <---------MYB59                                                       <---------At5g28300             --------->TOE2(3)                                                    --------->YAB1        <---------MYB52(2)                                             <---------ARR11(3)     --------->AHL20(2)                                  --------->At5g28300 ------------>CBF   <---------ANAC55(2)                   <---------AHL20(2)            --------->ARR11(3)   ----------->GT1   <---------ZAT18    --------->AHL20(2)             --------->AHL20(1) -------->ICU4 ------>MYB46(1)          <---------AHL20(2)      ----------->GT1--------->WOX13(1) ---->GT1 <-----------GT1         <---------AtLEC2      ----------->GT1<---------AHL20(1) --------->AHL20(2)   taattatgtaaataacctaattgtggacacctgtttgcataaataaatagtggcaaaactgtaaataagtgaatattttagcaattacagtataaattaa  2120300                              *TSS                            <----------DOF2                      --------->DAG2                     ---------->DOF2                  --------->AHL20(2)              --------->AHL20(2)             <---------AHL20(2)                                                                    <-             --------->AHL20(2)                                                        <----------DOF2           --------->YAB1  <---------ANAC58                                <---------At4g35610  <----       --------->AHL20(2)  <---------ANAC58     <-------GAMYB           <---------At4g35610<---------   --------->ICU4--------->AHL20(2)        --------->ZAT18           ------>NtERF2<-----------GT1  <-   gaacaaagattaaaaataaataaaaaagtgctttcattctttggatgcgctgttgtcaacttgtccctcgctgcctctgcttcttaactctttctttatc  2120400                                              <---------AHL20(2)                                              --------->AHL20(2)                                             <---------AHL20(2)                                             <---------AHL20(1)                                             --------->AHL20(2)                                             --------->AHL20(1)                                         <---------YAB1                                        <---------AHL20(1)                                        <---------AHL20(2)            <---------AHL20(2)                                       <---------ICU4                --------->AHL20(2)                                       --------->YAB1            ------>ZmHOX2a(2)                                      <---------YAB1            <------ZmHOX2a(2)                                      --------->ICU4           <---------AGP1                     <--                                    <---------ICU4             --------->ARR11(3)                <---                                    --------->YAB1             <---------ARR11(3)          <---------ANAC46    <---------ALFIN1               <---------AHL20(2)          <---------ARR14(2)          <---------ANAC55(1) ---------DOF2                     <---------YAB1              --------->GLK1(2)           <---------ANAC58 -------GT1            <---------TOE1(3)--------->AHL20(1)     --------->ARR14(2)          <---------ANAC58 -DOF2                 <---------TOE2(3)--------->AHL20(2)    <------ZmHOX2a(1)        <----------DOF2 --------DAG2 <---------ATHB12   --------->YAB1           <------NtERF2      --------->ANAC46    <---   acttttccactcccaaatcaatttttaggttttttttataattataatttatttgctctcggcaggatctatataatacacagaccagtctttgcgtgtg  2120500                                                                                                    -                                                                              --------->ANAC58      <                                                                            ------>MYB83  <---------MYB46(3)           <---------WOX13(1)                      --------->ANAC58         --------->MYB52(1)     <-         --------->ATHB12              --------->GLK1(1)                    ------>MYB46(1)       ---        <-------TEIL                  <---------ARR14(2)                  <---------MYB55(2)     ----    <---------ZAT18         <----------DOF2        --------->ANAC58      --------->ANAC58 --------->HSFC1(2)    --------->ZAT18         ============================================bZIP_DOF          <---------HSFC1(2) <---------ANAC58        --------->ARR11(3) --------------->AGL15        --------->ANAC58 --------->HSFB2a(1) <---------ANAC46        <---------ARR11(3) <----------DOF2    <-----------HVH21          <---------HSFB2a(1) <---------ANAC58       <---------CCA1(2)   ============================bZIP_DOF         <---------TOE1(2) --------DOF2     ----------->GT1     <---------GLK1(2)       --------->TGA1a --------->ANAC58  <---- ------ANAC58   ------>ZmHOX2a(2)     --------->ARR14(2)      --------->O2--------->MYB46(3) <-------TEIL ------ANAC58--------->ATHB12     <---------At4g35610         --------->bZIP60(2)        <---------TOE2(2)   cttgtgtgcattcattgatcgggtttatatcttttcatcggattttctttgtcgagcaagagccatgtcactgagacccaacgctaagacggaggttcgc  2120600                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                           --------->ANAC46                                                                         ============================                                                                         ---------->DOF2                                                                      --------->LBD16                                                                     <---------ANAC46                                                                     --------->ANAC55(2)                                                                     <---------ANAC55(2)                                                                    ==========================HOX2a_HOX2a                                                                    ------>ZmHOX2a(2)                                                                    <-------TEIL                                                                   ===========================HOX2a_HOX2a                                                                   <------ZmHOX2a(2)                              <------ZmHOX2a(1)                   <---------ARR11(3)                          --------->LBD16                         --------->ARR11(3)         ---------->DOF2 <---------ANAC46                         --------->AGP1 <---------ANAC58 -------->ARR14(2)      <---------LBD16                           <---------ARR14(2) ---------ARR14(2)    --------->ARR14(2)                          --------->ARR14(2) -----NtERF2          <---------ARR14(2)    <------ZmHOX2a(1)    <---------GLK1(1) --------->ALFIN1 ------>LBD16       <---------MYB46(3)      ==============================HOX2a_HOX2a ----->ANAC46      --------->ALFIN1         ===============================HOX2a_HOX2a <------ZmHOX2a(1) -----LBD16      <---------ANAC46 <------ZmHOX2a(1)             ----------->ARR10<---------ANAC58   cggaaccgatacaaagttgcagtggatgcggaggaaggacgacggaggagagaagacaacatggttgagatccgtaaaagcaagcgtgaggagagtttga  2120700                                                        <---------ATERF1(1)                                                        ------>NtERF2                                                       --------->DEAR3(1)                                                      --------->ATERF1(1)                                                      --------->RAP2.3(1)                                                      <------NtERF2                                                     ------>NtERF2                                                     --------->ABI4(1)                                                     <---------ATERF1(1)                                                    --------->RRTF1(3)                                                    --------->RAP2.6(2)                                                    --------->RAP2.3(2)                                                    --------->RAP2.3(3)                                                    --------->ATERF1(2)                                                    --------->DREB2C(2)                                                    --------->DEAR3(1)                                                    --------->RRTF1(2)                                                    <---------ALFIN1                                                    <---------ATERF1(2)                                                   --------->RAP2.3(1)                                                   --------->DEAR4(2)                                                   --------->ERF1                  --------->ANAC58                 --------->RAP2.6(1)                  --------->ANAC58                 --------->ATERF1(1)                --------->CCA1(2)                 ------>NtERF2             <---------TOE2(3)                    <---------ATERF1(1)             <---------TOE1(3)                    <---------RAP2.3(1)          ----------->HVH21                       --------->LBD16        <---------ANAC46                          <---------At4g35610        <---------ANAC55(2)                       --------->At4g35610        <---------TGA1a                          --------->ANAC46        --------->TGA1a           <---------GLK1(1)--------->ORA47(2)    <-------TEIL        --------->O2  --------->ANAC58      --------->ZAT2   <---------ETT(2)        <---------O2  --------->ANAC58      <---------ZAT2 --------->LBD16   --------->GLK1(2)        <---------ANAC58--------->ARR11(3)  <---------At4g35610       ----------->GT1    <---------At4g35610        <---------ANAC58<---------ARR11(3)  --------->At4g35610      <---------------AtSPL8 =================bZIP_DOF        --------->GLK1(1)--------->RRTF1(1)--------------->AtSPL8 ---------   tgaagaagagacgtgaaggtatgcaagctcttcagggtttcccttcagcttccgccgcctccgtcgataagaaggtacaattctggtttttagatgattc  2120800  Previous    Next  AGI:  At3g06710.1    Description:  similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G32670.1); contains domain PTHR13145 (PTHR13145) Range:  from: 2118175    to: 2120065    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g06720.1    Description:  AT-IMP (Arabidopsis thaliana importin alpha); protein transporter. Identical to Importin subunit alpha-1 (KAP1) [Arabidopsis Thaliana] (GB:Q96321;GB:O49599;GB:O81520;GB:Q940R6;GB:Q9C841;GB:Q9ZRI5); similar to importin alpha-1 subunit, putative (IMPA4) [Arabidopsis thaliana] (TAIR:AT1G09270.2); similar to importin alpha-2 subunit, putative [Arabidopsis thaliana] (TAIR:AT1G02690.1); similar to importin alpha-1 subunit, putative (IMPA4) [Arabidopsis thaliana] (TAIR:AT1G09270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44871.1); similar to Impa2 [Nicotiana benthamiana] (GB:ABM05488.1); similar to unnamed protein product [Vitis Range:  from: 2120330    to: 2124137    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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