Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->ALFIN1        --------->ARR14(2)                                                       <---------TOE2(3)          <---------ARR14(2)                                                     ----------->HVH21    ------->TEIL                                                 <------NtERF2            --------->SPL7                                                ------>NtERF2          <---------ANAC46                                                --------->ORA47(1)     --------->ANAC55(2) <---------ARR11(3)                                               --------->DEAR3(1)      <---------ANAC58   <------ZmHOX2a(1)             --------->YAB1                    <---------ATERF1(2)     <---------ANAC58<-----------RAV1(2)        <---------GLK1(2)                      --------->ATERF1(2) <---------ANAC58    <---------LBD16  ----------->HVH21     <---------YAB1        --------->ATERF1(1)  <---------ANAC58   ------>ZmHOX2a(1)   atgtctcacagataatcaaaacacttattcttcagcgctagcattctcgccggccttgacgttgtgcttccttgcgtacctctggttcctcaggaactta  2117600                                                                           <------MYB83                                                                           <------MYB46(1)                                                                          --------->MYB59                                                                          --------->MYB46(2)                                                            --------->ARR14(2)                                                            --------->GLK1(2)                                                            <---------ARR14(2)                                 <---------ICU4             <---------ARR11(1)                                 --------->YAB1             ------->TEIL<---------MYB52(1)           --------->YAB1       --------->ICU4             <---------CCA1(2)    --------->At4g35610    --------->ANAC46                <---------GLK1(2)    <---------At4g35610    --------->ANAC58    --------->ZAT6           <<<<<<<<<MYB1    ----------->RAV1(2)    --------->ANAC58  ----------->RAV1(1)        <<<<<<<<<MYB2  --------->YAB1 <-------TEIL <---------ICU4    <---------ATHB12           <---------ARR14(1)       ----------->GT1   gggtccatctgaaacatcatttcacataaacgcaataatcaaacctccaacactataacccgaatctgaaatcagttaggttagaactgtaataagagac  2117700                                                                               <---------O2                                                                               --------->O2                                                                               --------->TGA1a                 ----------->TGA1                                              <---------ANAC46                 ----------->HVH21                                             <---------ANAC58               --------->ALFIN1                                 --------->DEAR3(1)             <---------ANAC58                             ===============================bZIP_DOF             <---------ANAC46                    <---------ANAC58              <---------TGA1a             <---------ANAC58                    <---------ANAC58              <---------ANAC58           <------MYB46(1)                     <---------MYB52(1)------>NtERF2 --------->DEAR3(1)           <------MYB83                      <---------ANAC58   ----------->HVH21         <--------P <---------DEAR3(1)       <---------ANAC58  --------->ORA47(2)       <---------MYB46(3)         <---------ANAC58        <----------DOF2     <------NtERF2    ------>ZmHOX2a(1)             <---------ANAC58    <---------ZAT18       --------->ANAC46   ttactcctctggttggggtgtgacggtgtctccttggcttcttgattccgttcttgtgggctttcgccgactggttatgcgccgtgtgattcttcgactt  2117800                                                  --------->ANAC58                         --------->CCA1(2)                                                  --------->ANAC58                        <---------ARR11(3)                                                --------->MYB52(1)                        --------->ARR11(3)                                               --------->TOE1(2)                     <---------ANAC46                                               ------->GAMYB                     ------>ZmHOX2a(2)                                              --------->MYB46(3)                <------ZmHOX2a(2)                                              <---------MYB52(2)               --------->ARR14(2)                                            --------->MYB52(1)                 <---------ARR14(2)                                       --------->AHL20(2) <-----------RAV1(2) --------->GLK1(1)                                   <---------AHL20(2)   ----------->RAV1(1)   <---------GLK1(1)   ---   ggccatctctgagacacaagaccacaatacaaactattcaattgaataacgaacgaaacaacagggggaaatgaagccagagatcggccgtagatataag  2117900                                   --------->ZAT2                                 ------>ZmHOX2a(2)                                --------->CCA1(2)                                 --------->ANAC46                                <------ZmHOX2a(2)                             ----------->RAV1(1)                               --------->ARR14(2)                        <------NtERF2                               <---------ARR11(3)                       <---------ATERF1(1)                               <---------AGP1                           ------>NtERF2                               <-----------ARR10         --------->ANAC46--------->ATERF1(1)           --------->ZAT14     --------->ARR11(3)      --------->ANAC46 <---------SPL7           <---------ZAT14     --------->AGP1         <---------LBD16  <---------ANAC58       --------->TOE2(3)       <---------ARR14(2)  <----------DOF2     <---------ANAC58             <       --------->TOE2(2)     ----------->ARR10  <-----------GT1     --------->ANAC46              ---      ----------->RAV1(2)    <-------TEIL   <------MYB46(1)      --------->ARR14(2)              <---     -------->P           ----------->GT1   <------MYB83--------->LBD16<---------ANAC46 --------->TOE2(3) ------->DOF2<---------ZAT14<--------P   <---------MYB52(1)      <---------ARR14(2)     --------->TOE1(3)   aaaagctaacctgagtactgagagagagaggtagatctgctcggctaggtttactttccgcgatacaaatacggcgtctgcaacacaaaaccctaatttc  2118000                                         --------->AHL20(2)                                 --------->ZAT18                               <-------MYC2                               ------->MYC2                               ------->MYC3                               <-------MYC3             --------->ZAT14  <---------TGA1a             --------->ZAT18  --------->TGA1a             *TSS=======================bZIP_DOF --------->CCA1(2)             <---------ZAT14 ------>MYB46(1) --------->YAB1      <---------AHL20(2)     ------>MYB83<---------AHL20(2)    --------->AHL20(2)              <----- ---------WOX13(1) --------->AHL20(2)   <---------ATHB12       <---------AHL20(2)       ---------->DOF2 ------>ATHB12   <----------DOF2 <---------ZAT18<---------ARR14(2)                      ============= ------YAB1  <---------ZAT18--------->MYB52(1)  --------->ARR14(2)                  --------->YAB1   tgattgaatttatagtggactttaaatgaccaacgtgccctaataaatcatatatgggcctctaattaatctatctcgttgctaaatcatataagcccat  2118100                                                                <---------------AGL15                          ======================================================MADS_MADS             <---------ANAC58                                   --------------->AGL15             <---------TGA1a<------------CBF                   <-----------------AG             <---------ANAC46              --------->DAG2      <-----------------AGL1             <---------ANAC58    ----------->GT1               <-----------------AGL3             --------->O2 --------------->AGL15 --------->At4g35610             ==================bZIP_DOF   ---------->DOF2    <-----------GT1    ------->TEIL    <----------DOF2  ----------->TBP      <---------AHL20(2)            --------->ANAC58 -------CBF  <---------O2 <---------------AGL15 <---------At4g35610                     --------->ANAC58 ======================bZIP_DOF  <---------ANAC46<---------MYB52(2)        *TSS<----------DOF2   tgaatgaacccagagtcgtggccttttacaaattggggtataaataaagcagcaaaccatttttttcaaaatttggaatttctttgactcaaggaagtga  2118200                                                                <--------P                   --------                                                     --------->ANAC58                     --------->YAB1                                  --------->At4g35610--------->ANAC58                    <---------YAB1                       <----------DOF2            <------ZmHOX2a(2)                    --------->YAB1                   <-----------GT1<---------At4g35610--------->ANAC46                 --------->ICU4>   agaagacgagagatagagaagaaacctttctgtttcatcagaaaaatggacgatcaagctactctggtagaagacacagacaaacacgatgatgataaag  2118300                                                                        <---------bZIP60(2)                                                                      --------->REM1(2)                                                                      <-----------HVH21                                                                     --------->ALFIN1                                                                    ------->MYC3                                                                   <---------ANAC58                                                                 <---------ANAC58                                                                 <---------ANAC58                                                 <---------DAG2  <---------ANAC46                               --------->LBD16 <---------------AGL15<-------MYC2                             <---------LBD16   --------------->AGL15<-------MYC3                            --------->MYB52(1)<-----------------AG <---------ANAC58                          <------ZmHOX2a(2)   <-----------------AGL1------->MYC2                          =======================HOX2a_HOX2a    --------->ABI4(2)                          ================HOX2a_HOX2a           <---------ZAT18                         <-----------HVH21  --------->GLK1(1)  --------->ALFIN1                  --------->GLK1(1)       <------ZmHOX2a(1)   <---------MYB52(1)                  <---------GLK1(1)    <-----------RAV1(2) <---------LBD16                 --------->ARR14(2) --------->ARR14(2)   <---------ARR14(2)                 <---------ARR14(2) <---------ARR14(2)   --------->ARR14(2)                  <------- -->DOF2        =================HOX2a_HOX2a<---------GLK1(1)--------->LBD16             <-------TEIL >>>>>>>>TBF1   <------ZmHOX2a(1)  <------ZmHOX2a(1)    <---------GLK1(1)              --------->YAB1   aagaagaagacttgtgcaggatttgccgatcaccggaggaaccaggaaaccccttatggtatccggtgcgcgtgtcgaggctccatcaatgttcatcaag  2118400                                 --------->ANAC46                                 --------->ANAC58                                 --------->ANAC58                                                <---                             --------->CCA1(2)                                     <---------ANAC58                        ------>NtERF2                                              <---------ANAC58                        <---------LBD16                                           <-------TEIL <-----                        --------->LBD16                                          --------->ARR14(2)                      <---------LBD16 --------->ALFIN1                           --------->ARR11(3)        --------->ARR14(2)  <---------ARR14(2)               <----------DOF2     <---------ARR14(2) -        --------->ARR11(3)  --------->ARR14(2)     <-----------GT1               --------->GLK1(2)  <        <---------ARR14(2)--------->LBD16       <---------YAB1        ---------->DOF2          <----- --ICU4<---------CCA1(2)<---------At4g35610----------->GT1   <---------DAG2   <---------TOE2(3)<-----   actgtcttcatatctggctcaatctccgcggatacaagcagtgcgaggttattatacaaacctctttttctctaaagaatgaggttcttgttctatagcg  2118500  Previous    Next  AGI:  At3g06700.1    Description:  60S ribosomal protein L29 (RPL29A). Identical to 60S ribosomal protein L29-1 (RPL29A) [Arabidopsis Thaliana] (GB:Q9M7X7); similar to 60S ribosomal protein L29 (RPL29B) [Arabidopsis thaliana] (TAIR:AT3G06680.1); similar to 60S ribosomal protein L29 (RPL29B) [Arabidopsis thaliana] (TAIR:AT3G06680.2); similar to ribosomal protein L29 [Panax ginseng] (GB:BAA96072.1); contains InterPro domain Ribosomal protein L29e; (InterPro:IPR002673) Range:  from: 2117353    to: 2118013    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g06710.1    Description:  similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G32670.1); contains domain PTHR13145 (PTHR13145) Range:  from: 2118175    to: 2120065    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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