Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         ==============                                                                                       --------->At4g35610    ------>ZmHOX2a(2)                                                                  <---------At4g35610   <------ZmHOX2a(2)                                                                   ----------->RAV1(2)   --------->CCA1(2)                                                                <-------TEIL  <---------ARR14(2)                                                                ------>ZmHOX2a(2)  --------->ARR14(2)                                                               <------ZmHOX2a(2)  --------->AGP1                                                                  <---------ARR14(2)  <-----------ARR10                      --------->ALFIN1                         --------->ARR14(2)  <---------ARR11(3)       --------->ANAC58           <---------ANAC58           <------ZmHOX2a(1)  --------->ARR11(3)       --------->ANAC46         --------->AtLEC2           <---------TOE2(3) --------->RVE1(1)         --------->ANAC58       <---------ANAC58       <------ZmHOX2a(1) ------->DOF2   ------>NtERF2         <---------TOE2(3)                  =================HOX2a_HOX2a ---->YAB1     --------->ANAC46     ----------->HVH21 <---------ANAC58   ==================HOX2a_HOX2a -ZmHOX2a(2)--------->ANAC46  <---------ALFIN1    <---------ANAC58     <---------TOE1(2)    ---------   aaaagatctactcttcgacaccagcattctcgccactcttgacgttgtgcttccttgcatacctctggtttcttaggaatttaggatccatctgcaacat  2114500                                          <---------ARR11(1)                                          ------->TEIL                                          <---------ARR14(2)                                          --------->ARR14(2)                     <---------ARR14(2)                                         <---------ARR14(1)                      --------->ARR14(2)                                         <---------GLK1(2)                       --------->GLK1(2)                              ----------->GT1                 --------------->AGL15                              <------MYB83--------->GLK1(2)   <----------DOF2   <---------GLK1(2) ===RAV      <---------AHL20(2)   ----------->ARR10           <---------------AGL15 -->RAV1(1) --------->AHL20(2)<------MYB46(1)       ----------->GT1  ----------->GT1               --   ttcacaaaaatagattaaatatcaaacttggaaggtaacatccgaatctgaaaattgtttatagctttaaaatgtaacatcagaatctgtaatcgtttat  2114600                                         ----------->TGA1                                         ----------->HVH21                                       --------->ALFIN1                                     <---------ANAC58                                     <---------ANAC58                                     <---------ANAC46                                   <------MYB46(1)                                   <------MYB83                                  --------->MYB46(2)                                  --------->MYB111(2)                                  <---------MYB46(3)                                  --------->MYB111(1)                                  --------->MYB55(2)                                  <---------AtMYB61                                  <---------DEAR3(1)                                 <--------P <---------DEAR3(1)         <---------MYB52(1)                                 <---------MYB55(1)                  <---------ANAC58                                <---------MYB52(1)                   <---------ANAC58              --                               <---------MYB46(3)         <---------ANAC58                         <- --------->GT1              ------>ZmHOX2a(1)             <---------ANAC58      ------->TEIL --------   aggtttaaaatgtaacagagactcttactcctctggttggtgtgtgacggtgtctccttggcttcttgattccgttcttatgcgccttggcagactgatt  2114700                                                                               --------->MYB52(1)                                                                              --------->TOE1(2)                                                                             --------->MYB46(3)                                                                             <---------MYB52(2)   --------->DEAR3(1)                                                    ------->GAMYB   ============================================MYC_MYB                  --------->ANAC46   <---------TGA1a                                                      --------->ANAC58   --------->O2                                                         --------->ANAC58   <---------ANAC58                         ----------->RAV1(1)        ------>MYB46(1)   <---------O2                            --------->ANAC58            ------>MYB83   --------->TGA1a                         --------->ANAC58           --------->MYB52(1)   <---------ANAC58                    ------->GAMYB                 --------->DEAR3(1)   <---------ANAC46                   --------->ANAC46           --------->MYB46(3)  <------NtERF2                     --------->MYB52(1)           <---------ATHB12 ------->ZAT18                     --------->MYB46(3)          --------->WOX13(1)            -------- --------ZAT18                --------->HSFB2a(2)   <---------DAG2--------->YAB1        ----------->GT1 ->ATHB12                     <---------HSFB2a(2)   <----------DOF2 --------->MYB46(3)  <---------ZAT6   gtgcgccgtgtgattcttcgatttcgccatttctgtaacaacggcacaacacaacttttcaaactcaatcaccaacgaaacaaacgagaagagttaaaag  2114800                                      --------->TOE2(2)                                 <---------MYB52(2)                                <---------At4g35610                        --------->CCA1(2)                       <-----------ARR10                       --------->ARR14(2)               <---------O2                       <---------ARR14(2)    --------->DAG2             <------MYB83 *TSS                     ----------->GT1  --------->TOE2(3) --------->ANAC58<------MYB46(1)                    --------->RAP2.6(2)     ---------->DOF2     <------ZmHOX2a(1)--------->ANAC46                   <---------LBD16  -------->P          <---------TGA1a ----------->GT1                  --------->At4g35610----------->RAV1(2)--------->ANAC58--------->ANAC55(2)               <------ZmHOX2a(2)--------->At4g35610   --------->CCA1(2) <---------ANAC55(2)              <-----------HVH21 --------->ZAT2     ----------->ARR10  --------->CCA1(2)--------->YAB1   --------->AHL20(2)--------->LBD16==============================MYC_MYB       <-------TEIL -->DOF2 --------->TOE1(2)  --------->ANAC46======================bZIP_DOF----------->HVH21   tcaaattatatccagcgatcagccggatataagcagctaacctgagtaaaggggagagacgcgagaggaaagataggtgacatacacaatagtcaaaacc  2114900                          <<<<<<<<<<<<<<<<<LFY                          ----------->RAV1(1)                       --------->ANAC46                                                   <---------ARR14(2)                      --------->DEAR3(1)                  <---------YAB1                  --------->ARR14(2)                   <---------ALFIN1                    <---------SPL7                     --------->GLK1(2)                   ----------->RAV1(1)                <---------ANAC58               <---------ANAC58                --------->ANAC58                      <---------ANAC58               <---------ANAC46                --------->ANAC46                --------->CCA1(2)              --------->ATHB12                --------->ANAC58               --------->ARR11(3)             <---------YAB1              <-----------GT1                  <---------AHL20(1)--------->ZAT18     <---------ANAC58         <---------AHL20(2)     <---------ZAT18<---------AHL20(2)<---------ZAT18 <---------WOX13(1) <         --------->AHL20(2)<---------ZAT14  --------->AHL20(2)--------->MYB52(2)<------------CBF  <--   ctagatggaatttaaatcaccccacagaccacagtggcctcttagataatatatgggcttacgatagtggcctcttatatgtgattggcgagaatatggg  2115000                                        ------>MYB83                                        ------>MYB46(1)                                       <---------ALFIN1                                     <-----------------AGL1          ------->TEIL     --------------->AGL15   <---------MYB52(1)      <---------------AGL15  --------->LBD16         <---------ANAC58                                                    ------- <---------HSFB2a(2)      <-----------------AGL3                                              <------ --------->HSFB2a(2)      <---------ANAC46                                           <---------ALFIN1 ---------LBD16           <---------ANAC58                       <---------ATHB12   <---------ZAT18 -------SPL7 <----------DOF2 --------->AHL20(2)            --------->At4g35610      --------->ZAT18   cttccggtaatgaagcttttgtatacttgcttaaaatagacccacttaggcccgtttcattagctaaatcaatttgacaaaattagcccacttcaatttt  2115100                                                                                                -----                                                                                               ------                                                                                               <-----                                                  <---------TOE2(3)                            ------    <---------ICU4         <---------YAB1      <---------MYB52(1) <-----------HVH21     <-------GAMYB    --------->YAB1   <-----------GT1      <-----------GT1      <---------ANAC58        <---------MYB46(3) -->AHL20(2)   ----------->GT1  <---------At5g28300            <---------ANAC58     <------MYB46(1)<- ---AHL20(2)--------->MYB52(1) <-----------GT1<-------GAMYB    <---------AtLEC2     <------MYB83<----   ttataaacatgatcaaacggttttttcttatttttactgtattttttccgttaagaaaactgtttgcctgtcatttgatagtcatttggtcgttagagac  2115200                         ------>MYB83                         --------->MYB52(1)                         ------>MYB46(1)                        --------->MYB55(1)                        ----------->HVH21                       --------->AtMYB61                       <---------MYB59                       <---------MYB46(2)                       <---------MYB111(1)                       <---------MYB55(2)                                       --------->AHL20(2) ------>GT1            <---------MYB52(2)                                       <---------AHL20(2) --------->AtSPL8     --------->ANAC58                                        <-----------------AGL1 ----------AtSPL8     --------->ANAC55(1)                                  ------>ZmHOX2a(1) --------->AtSPL3     --------->ANAC46                                    --------->TOE1(3) ------TEIL           --------->ANAC58                                    --------->TOE2(3)         - -----ANAC46      <-----------GT1  <---------MYB52(1)           <---------MYB52(1)                  <   gtacaaattcaattttgttttcacacctaacgtagtcgtttgtgttttttttttttttttttagtcgtttgtgtttccttaattaatctggcaaacttca  2115300                                                                                                   --                                                                                                   <-                                                                                                   --                                                             <-----------GT1                       <-                                                           <---------AHL20(2)             <---------ICU4                                                          --------->AHL20(2)             <---------YAB1                 <---------ICU4                       --------->AHL20(2)               --------->YAB1         --------->AHL20(2)                           <---------AHL20(2)            --------->YAB1 --     --------->AHL20(2)                               <---------AHL20(1)       <---------ATHB12   <--     <---------AHL20(2)                     --------->ANAC55(2)               ------>MYB83--------->YAB1 --------->AHL20(2)                         <---------ANAC55(2) --------->ANAC46--------->YAB1    --- -------->AHL20(2)        <---------ZAT6   --------------->AtSPL8             ------>MYB46(1)-------- ---------AHL20(2)      ----------->GT1    <---------------AtSPL8            --------->WOX13(1)   <--   atataaattaaaaatataaacatgtctagtgaaaattgaatgaattaagtactcaaaaaattttatccacaactcaaaccaatcaagaatcataataaca  2115400  Previous    Next  AGI:  At3g06680.1    Description:  60S ribosomal protein L29 (RPL29B). Identical to 60S ribosomal protein L29-2 (RPL29B) [Arabidopsis Thaliana] (GB:Q84WM0;GB:Q9M7X5); similar to 60S ribosomal protein L29 (RPL29A) [Arabidopsis thaliana] (TAIR:AT3G06700.1); similar to 60S ribosomal protein L29 (RPL29A) [Arabidopsis thaliana] (TAIR:AT3G06700.2); similar to 60S ribosomal protein L29 (RPL29A) [Arabidopsis thaliana] (TAIR:AT3G06700.3); similar to ribosomal protein L29 [Panax ginseng] (GB:BAA96072.1); contains InterPro domain Ribosomal protein L29e; (InterPro:IPR002673) Range:  from: 2114260    to: 2114885    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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