Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->ZAT18                                                <---------At4g35610      <---------ZAT18                                                <---------ZAT2      <---------ZAT14                                                --------->At4g35610 <---------AHL20(2)    --------->ZAT14                                        --------->AHL20(2)    <------ZmHOX2a(1)    <---------ZAT18           <---------AHL20(2)          <---------ATHB12--------->At4g35610 <------ <---------ANAC46       --------->ANAC55(2)               --------->AHL20(2)  <-----------RAV1(2) -ARR10                 <---------ANAC55(2)     ------->TEIL         --------->ZAT2     --------->AHL20(2)   cttctgtgtgctcttaaaactgagatacctattgaattgtggtcaccatgaatttcatcaataaataacacagctcagaagcaggagtgatttaatatga  2113000                                                                <---------TOE2(3)                            --------->YAB1                    ---------->DOF2                            <---------ICU4                <---------------AGL15                           <---------ATHB12               --------------->AGL15                     <-----------GT1                     <-----------------AG                   --------->YAB1                        ----------------->AGL2               <---------AHL20(2)                        ----------------->AGL1              --------               <---------AHL20(1)                  <---------ANAC55(2)  ---------->DOF2      <-------               --------->AHL20(1)        --------->ZAT2  ----------------->AGL3              --------   <---------GLK1(2) <---------YAB1      <---------ZAT2------------------------>ANAC81     <---------ALFIN1 ---YAB1       --------->AHL20(2)        --------->At4g35610 <---------ATHB12   <---------ZAT6   atacagaagctctacaataaattatactaatcaagacaaacccagctcgaatcaagtgagccaataaaggaaaacaaagctagagctagagagacacctg  2113100                                                     ------->GAMYB                                                    <---------MYB55(2)                                                    --------->MYB46(3)                                                   ------>MYB46(1)                                 --------->ZAT18   ------>MYB83 ------>MYB83                                 <---------ZAT18 <---------MYB59------>MYB46(1)        <---------ICU4                               --------->At4g35610 -------->P --------->AtMYB61        --------->YAB1                            --------->LBD16      <---------MYB111(1)                  --------->ICU4                           <---------HSFB2a(2)   <---------MYB46(2)             ----------->GT1 <XXXXXXXXXXXXXXXXXXXXXMIR845B <---------At4g35610--------->MYB55(1)          ----------->GT1 ->At4g35610               --------->HSFB2a(2)   <---------MYB111(2)         --------->DAG2   ------- --At4g35610              <---------LBD16        --------->MYB46(3)      --------->LBD16     -------- --->RAV1(2)          <----------DOF2  --------->MYB52(1)----------->RAV1(1)---------->DOF2 ---------   catcgaattggtattagattgagacttttccggagcgcccataactgattaccaacctccaacaccaaatcgagccgagaaagtgaaaataatgaccgac  2113200                                                  <------NtERF2                                                 ------>NtERF2                                                --------->DEAR3(1)                                                <---------DEAR3(1)                          ---------                                               <------NtERF2  <------NtERF2<---------HSFB2a(2)                                               --------->ATERF1(1)         --------->HSFC1(1)                                              <---------RAP2.3(1)          --------->HSFB2a(2)                                             <---------DEAR3(1)     <-------TEIL  <----------ID1   ---------->DOF2                   <------ZmHOX2a(1)     <---------LBD16 <---------HSFC1(1)      -- -->MYB52(1)                    --------->YAB1<---------ATERF1(1)  --------->GLK1(2) --------->ANAC58 --->HVH21<---------TOE1(3)     --------->ATHB12<---------ANAC46  <---------ARR14(2) --------->ANAC58 >DEAR3(2)<---------TOE2(3)    <---------YAB1--------->ANAC46--------->LBD16     <-------------------   ggtagtaaagttagggttttggagcaacgagaaatgataggaattagacggcgtcgatataggcgggagattcagttctcgaaggggacgaaatcaaaga  2113300                                                                                         --------->TOE2(2)                                                                                         --------->TOE1(3)                                                                                         --------->TOE1(2)                                                                                        <---------HSFB2a(1)                                                                                        --------->HSFB2a(1)                                                                                        <---------HSFC1(2)                                                                                        --------->HSFC1(2)                    --------->ANAC46                                                    --------->MYB46(3)                  --------->MYB52(1)                                                   ------>MYB46(1)                 <---------SPL7                                                        -------->P----                 ----------->HVH21                                                    <---------ALFIN1            <---------WOX13(1)                                                       <---------ALFIN1          <---------ICU4                                                           --------->ANAC46 ->DOF2--------->TOE2(3)                                                       <----------DOF2   ---- -------->DOF2 ----------------->AGL1                               <---------At4g35610------>MYB83-- --WRI1--------->TOE1(3)                                 <----------DOF2  ---------->DOF2--------->TOE2(3)   aaaaagaaaccctaattgccagacggagcatcaaaaaaacattgacattctctctctagcttttattttcttctgcgaaagctttccccaaccttcgaaa  2113400                                                                    <---------YAB1                                                                    <---------AHL20(2)                                                                   --------->AHL20(1)                                           <---------AHL20(2)      --------->AHL20(2)                                  ----------->GT1     <---------At4g35610                                  <----------ID1---------->DOF2    <---------AHL20(2)                           *TSS ---------->DOF2--------->AHL20(2)  <---------AHL20(1)                         ------------------------>ANAC81        --------->AHL20(2)                      ------------------------>ANAC81 --------->At4g35610         <---------MYB52(1) ---------->DOF2      ----------->GT1      --------->AHL20(2) --------->AHL20(1)--------->ANAC46 ----->ANAC58        <------ZmHOX2a(1)     --------->AHL20(1) --------->AHL20(2)--------->ANAC55(2) ----->ANAC58       ----------->GT1       --------->AHL20(2) --------->YAB1    <---------TOE2(2) ------->ANAC46    ------------------------>ANAC81   ----------->RAV1(1)       <---------TOE1(2)    <   cgcgaaagaagagagaagagagaggagaaaaaaaaaaagaaaaaaaaaattaaagcagcagaaaaataatataattcttcatacgttatgaactaaattc  2113500                                                      ------->MYC2                                                      <-------MYC2                                                      ------->MYC3                                                      ------->PIF5                                                      <-------MYC3                                                      <-------PIF5                                                     --------->ANAC58                                                     --------->ANAC46                                                     --------->ANAC58        <---------ZAT18                                                     <---------ALFIN1     <------MYB46(1)                                                   <---------ALFIN1       <------MYB83                                                  --------->DEAR3(1)      <---------DEAR3(2)                                                  --------->MYB46(3)      <---------MYB46(3)           <---------ANAC58                      --------->ANAC58        <---------DEAR3(1)           <---------ANAC58                      --------->ANAC58  ------>NtERF2        <---------MYB52(1)                      ------>NtERF2      --------->LBD16 --------->YAB1                ---------->DOF2 <---------ALFIN1  <---------LBD16     <----------DOF2 ---------ICU4    <----------DOF2           ----------->HVH21<----------DOF2<---------MYB52(1)     --   cattaatacccttacttgccctttgtattcactaaaaggccatcgagcgacacccacgcgctcctttgccgcgagtcggttcgctctctttaaaaacgac  2113600                                                                            <---------O2                                                                            <---------TGA1a                                                                            --------->O2                                                                            --------->ZAT2          -      <---------ANAC46                                                      <---------ZAT2--------->ATHB12      <---------ANAC58                                                      --------->TGA1a <--------      <---------ANAC58                                                    <-----------RAV1(2)<-------      <---------bZIP60(2)                                                 ===========================     <-----------------------TaNAC69(2)            ----------->GT1     --------->ANAC46   <---------ICU4   ----------->HVH21                             ---------->DOF2--------->YAB1--------->ALFIN1     <-   ----------->TGA1        <---------ARR14(2)    =====================================bZIP_DOF     <-  <-----------HVH21   --------->ANAC58       =========================================bZIP_DOF     <- --------->RAV1(2)    --------->ANAC58       ---------->DOF2   <---------ATHB12          <---------YAB1   agcctgtgacgtagaagaaatgacaagcagaaatgttttgtctgtgtaaaagaaagttaaatccaatgaaaatgcgccaggtgggaatttgatcattgtt  2113700                                                        ------->MYC4                                                        <-------PIF5                                                        ------->PIF5          <------ZmHOX2a(2)                                                        <-------MYC3         --------->AGP1                                                        ------->MYC3 <-------GAMYB                                                        ------->MYC2--------->MYB111(2)                                                        <-------MYC2--------->MYB111(1)                                                        <-------MYC4--------->MYB46(2)                                                       <---------PIF3(3)     <---------AGP1                                                       <---------TGA1a       <---------ARR11(3)                                                       --------->TGA1a  <------MYB46(1)                                                       <---------O2 --------->MYB55(2)                                                       --------->O2 --------->MYB52(2)                                                       ============================MYC_MYB                                                       --------->PIF3(3)<------MYB83                                                       ======================MYC_MYB                                          ---------->DOF2           <---------MYB46(3) <---------MYB52(1)                       =======================bZIP_DOF    <---------ARR14(2) -------->LBD16                          <---------WRKY12        <------MYB83--------->ARR11(3) -YAB1                    --------->ARR14(2)           --------->ANAC46--------->MYB111(1) ----RAV1(1)              <---------ARR14(2)      <-----------GT1<------MYB46(1) ====RAV             <---------ANAC46    <---------WRKY38(1)    --------->MYB59------>ZmHOX2a(2) --------ANAC46    --------->ZAT14       <---------WRKY45       --------->MYB111(1)                -- --------ANAC58    <---------ZAT14      --------->WRKY18(1)     --------->MYB46(2)               ---- --------ANAC58   ----------->HVH21<-----------RAV1(1) <---------bZIP60(2)<--------P          <------   gccgtgagattagtgatgctctgaagtgtataggcttatgtggtcaaagaaataaccacgtggcattaggtagttggtagatctatccgaagtgcaacta  2113800                                                <---------ZAT18                                     <                                             <---------ANAC58                              <---------AHL20(2)                                             <---------ANAC58                              --------->AHL20(2)                                  <----------DOF2                                         <---------AHL20(2)                        --------->ANAC58  --------->TOE2(3)                               <---------AHL20(1)        ---------->DOF2 --------->ANAC46  --------->TOE2(2)                      <----------DOF2    < ------->DAG2           --------->ANAC58 <---------HSFB2a(1)                  <---------ALFIN1   <--- ------>DOF2            --------->bZIP60(2)  <---------ANAC46         <-----------TGA1    --------->AHL20(2) ---MYB52(2)            --------->O2   <-----------GT1            <----------DOF2<---------DAG2<-----   aaaggcgagacaaaggaatcgaaaccacgacacgagctttgtaaccttcgtgtgcttaaacaagggttctttcgtcatcaccactttatcaaattatttt  2113900  Previous    Next  AGI:  At3g06670.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT5G49390.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD53932.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44893.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66734.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Protein of unknown function DUF625 (InterPro:IPR006887) Range:  from: 2105465    to: 2113427    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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