Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->ARR14(2)                   <---------GLK1(2)                 <------NtERF2     --------->ZAT14  --------->MYB52(1) ------->GAMYB  --------->RAP2.6(2)                  --------->ANAC58                      <---------At4g35610 <---------ALFIN1--------->LBD16         <---------TGA1a                             ------>ZmHOX2a(2) ---------MYB55(2) <---------ARR14(2)    --------->TGA1a                            <------ZmHOX2a(2) -------->MYB46(3)<------NtERF2        <------ZmHOX2a(1)                           <---------ARR11(3) ------>P <---------ICU4 --------->DEAR3(1)          --------->ANAC58              --------->ARR11(3) -----MYB52(2) <---------LBD16  <---------ZAT2       --------->ANAC55(2)     --------->At4g35610 -At4g35610    <---------ANAC46 --------->ZAT2       --------->ANAC46 ------>ZmHOX2a(2)    --------->At4g35610   taaccaccgtagtcatggccggaatcgccatcgtagctcgaggacgtctctgtttacgaaatttcagtttgatccgattagctaagatcgctctgctcca  2055000                                                 --------->SPL7                                                 --------->RAP2.6(3)                                               ----------->HVH21                                               <---------SPL7                                              --------->ANAC46                                              --------->ANAC58                                            --------->MYB52(1)                                           <---------REM1(2)                                          <-----------HVH21                                          <----------DOF2                                        --------->At4g35610                                        --------->ATERF1(1)                                        <------NtERF2                                       <---------ERF1                                       <---------RAP2.3(1)                                       <---------DEAR3(2)                                       ------>NtERF2                                       <---------ATERF1(1)                                      <---------RAP2.6(2)                                   ================================HOX2a_HOX2a                    --------->ANAC58  <---------DEAR3(1)                    --------->ANAC58  <---------RAP2.3(2)                  --------->MYB52(1) <---------LBD16                 <---------ARR14(2)------>ZmHOX2a(2)             --------->At4g35610 --------->ARR14(2)                                 <---------YAB1          --------->LBD16  --------->ARR11(3) --------->ANAC58                   --------->ICU4         --------->LBD16   <---------ARR11(3)<---------LBD16------>ZmHOX2a(1)  <---------At4g35610       <-----------------AGL1    <---------ARR14(2)    <----------DOF2    <---------MYB52(1)     <--- <---------ZAT14 --------->ARR14(2)<---------DEAR3(1) <---------DAG2    <---------MYB46(3)    <------   gagtgttcttccccgagcggaaacggcaagagctcgatcggcggcttcacggacggcctttcctcgtttctgagccgttggagatgatgatgttgaggcg  2055100                                                            <----------DOF2                                                      <---------MYB46(3)                                                      <-----------RAV1(1)                                                  <-------TEIL                                                  ------>ZmHOX2a(2)                 <-----------ARR10                                                 <------ZmHOX2a(2)                  ------->TEIL                                                --------->ARR11(3)                 <---------CCA1(2)                                                <---------AGP1           <-----------HVH21                                                <---------ARR14(2)   --------->ANAC58                                                --------->ARR14(2)   ------>ZmHOX2a(2)                                                <---------ARR11(3)   --------->ANAC58            ----                                               <---------GLK1(1)    <------ZmHOX2a(2)         <------                                              ----------->ARR10    --------->ARR14(2)       ---------                      <---------ZAT18      <---------ANAC46<---------ANAC58    <---------ANAC46  ---- ---NtERF2 ------>NtERF2               <---------At4g35610 <---------ANAC58  <---------ANAC46 ------- ---LBD16  <------NtERF2           <---------MYB52(1)<---------MYB52(1) --------->DEAR3(1)<---------LBD16   gaagagttgaggcggacttgttggagcgcttggaacagtttggctgagtagatccgttgttgcttctccgatcgccatcgcgcgtgaatctcaccggaga  2055200                                          <-----------ARR10                                          <---------ARR11(3)                                  <------                                          <---------ARR14(3)                                  -------                                          <---------ARR14(2)                                  -------                             <-------GAMYB--------->ARR11(3)                                  <------                             <------NtERF2--------->GLK1(2)                            <-------GAMYB                             --------->At4g35610                  ------>ZmHOX2a(2)   <---------MYB46(3)                            <---------MYB46(3)                   <------ZmHOX2a(2)    <---------DEAR3(2)           <---------WRKY18(1)     <---------At4g35610           --------->CCA1(2) <---------DEAR3(2)     <-------TEIL          <---------ANAC46<---------GLK1(1)    --------->ARR11(3) <---------ORA47(2)   --------->ARR14(2)     <---------LBD16================================HOX2a_HOX2a <---------DEAR3(1)   <---------ARR14(2)     ------>NtERF2  <------ZmHOX2a(1)      --------->ARR14(2) <---------ERF1  <---------HSFB2a(1)     <------NtERF2  ===============================HOX2a_HOX2a------>NtERF2 ----------->ARR10        --------->ATERF1(1)                   <---------AGP1     <---------RAP2.3(1) ---------->TaMYB80       <---------At4g35610     <----------DOF2--------->At4g35610<------NtERF2 ----->ANAC58            <---------RAP2.3(1)------>ZmHOX2a(2)   <---------ARR11(3)<---------RAP2.3(3) ---ARR14(2)            <---------RRTF1(2)--------->ARR14(2)    --------->AGP1    <---------DREB2C(2) >LBD16  <----------DOF2<---------RAP2.3(2)<------ZmHOX2a(2)    <---------ARR14(2)<---------At1g77200 ----->ANAC58           <---------RAP2.6(2)--------->GLK1(1)   <---------GLK1(1)  <---------DEAR3(1) -->ARR14(2)            <---------DEAR3(1)<---------AGP1   --------->SPL7       <-----------HVH21   cggaagatgcgcttgaacgagacgatgcggcggatgaagcagaggatctcttctttctccgaacgagatctgaagtagtactcgtcggcggttcaatatc  2055300                       <--------ATHB1                       -------->HAHB4                       --------->ATHB51                       <---------ICU4   <---------At4g35610                      <---------ATHB12  --------->LBD16                      <---------AHL20(2)--------->At4g35610          ------>NtERF2--------->ATHB12--------->ANAC46         --------->ANAC58          --------->GLK1(1)         --------->ANAC58         <-----------ARR10         --------->ANAC46<---------WOX13(1)  <------ZmHOX2a(2)   --------->AHL20(2)--------->ZAT14          <---------ARR14(2) ---ARR14(2)          <---------ATHB51<---------LBD16            --------->GLK1(2)     <---------At4g35610 -->ARR11(3)          --------->ICU4------>ZmHOX2a(2)            --------->ARR14(2)    --------->At4g35610 -->ARR14(2)        ------>MYB46(1)<---------GLK1(1)            <---------GLK1(2)     <---------ANAC46 ---ARR11(3)        ------>MYB83  --------->ARR11(3)---------->DOF2      <---------AHL20(2)   -------   tgagatcagagacgccataaccaaataattggctctgatctccgcagtcgtattgaaagagctacagaatccgaatttatctgaagttgagcggaagaaa  2055400                                                                             <---------ANAC55(2)                                                                             --------->ANAC55(2)                                                                             <---------O2                                                          ----------->GT1    <---------REM1(1)                                                --------->DAG2               --------->O2                                               ---------->DOF2          --------->ANAC46                                              <---------AHL20(2)        <---------ANAC55(2)       <--                    *TSS                    <-----------TBP             --------->ANAC55(2)      ----                 --------->MYB52(1)       --------->CCA1(2)             --------->O2            -----   <---------AHL20(2)                    <---------ARR11(3)             <---------O2     --------->MYB46(3) <---------YAB1 --------->ICU4           --------->ARR11(3)           --------->YAB1     <---------MYB52(2) --->DOF2<---------ANAC46            <------ZmHOX2a(1)   <-----------------------TaNAC69(2)--------->MYB52(1)   gttatgaaattgtggagaataatggaagggagaagaagaggaagatatataaagggagagaggtatcaactatcacgagacgtagcagttaacaaacggc  2055500                                <---------MYB52(1)                            ------>NtERF2                                  --------->ANAC58                           <---------ANAC46                                --------->ANAC58                           <---------DEAR3(1)                              --------->ANAC46                           --------->DEAR3(1)                             <-------TEIL                          --------->ATERF1(1)                            --------->CCA1(2)                          <------NtERF2                                 --------->ARR14(2)                          --------->RAP2.3(1)                           <---------ARR14(2)        <---------REM1(1)<---------RAP2.3(1)                            --------->ARR11(1) ----NtERF2             <---------DEAR3(1)                        <-----------GT1       --------->YAB1 -->NtERF2             --------->At4g35610                 ---------->ID1--------->ARR14(1) ---->PCF5    ----------->GT1<------NtERF2               <-----------RAV1(1) ---------->DOF2   <-----   cccgttttagatgtagcagttaataagcggcgtcgttttgtcaatttgttttttagtatttgttgttttagccagatacgaaagtggcatttgtaatgca  2055600                         --------->ANAC58           <---------ANAC58        --------->AHL20(2)                       --------->MYB52(1)           ----------->GT1         <---------ICU4                           <-----------GT1           <---------ANAC58       <---------ATHB12                         <---------AHL20(2)        <---------ARR14(2)        --------->AHL20(2)                       --------->AHL20(2)        --------->ARR14(2)        <---------AHL20(2)                    --------->YAB1        --------->GLK1(2)--------->ANAC58                              <---------YAB1 ---------->DOF2         --------->ANAC46        --------->ZAT6        --------->ICU4      --------->TOE2(3) ----AtLEC2<---------ANAC46       <---------ATHB51                ----------->GT1          ----------   tgataaagagaattcgtgaataccaccaagaaacaaataatttcattctcaacactagtggaattgataagttataattaactggctctataacctctaa  2055700                                                                <---------YAB1                                      ---------->DOF2        <---------YAB1                                   <---------ANAC58       <---------YAB1                                   <---------ANAC58       --------->ICU4                        -----           <---------YAB1          <---------ANAC46    --------->ICU4                           <----         --------->YAB1    <---------ICU4          <---------YAB1                        --------->ATHB12         <---------ICU4    --------->ATHB12  --------->ICU4--------->YAB1             <-------MYC3        --------->ICU4    --------->ICU4--------->ANAC58<---------ICU4                ------->MYC3 ----->AGL15              <---------YAB1--------->ANAC58--------->YAB1             <---------ALFIN1   tggttttggaataatgagagacagagacatcattgtgacttgaagcaatgtttatgaattatgattatacttaaaaagttttgttccacgttgattagtt  2055800       --------->AHL20(2)       <---------AHL20(2)     <---------YAB1   <---------ICU4   <---------AHL20(2)   <--------HAHB4   --------->ATHB51   --------->AHL20(2)   -------->ATHB1                                                                                  --   --------->YAB1                       ---------->DOF2                                     ---------  --------->ICU4         ----------->HVH21       --------->AHL20(2)                <---------ARR11(3)  <---------ATHB51-------->P     --------->ARR11(3)                                --------->ARR11(3) ---->ZAT18      <-----------GT1 <---------ARR11(3)                    --------->YAB1------>ZmHOX2a(2) -----ZAT18 <-----------GT1     <---------RVE1(1)<---------AHL20(2)   <---------ATHB12<----------DOF2   cacaattatttttttaaacttaccctcttgacagagattttagaaagaaatttatatacaaaatttcttacaatcacgagttttcgatcttttgtagaca  2055900  Previous    Next  AGI:  At3g06590.1    Description:  transcription factor. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G17100.2); similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G17100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44932.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 2054429    to: 2055420    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version