Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->ANAC58                                                           <---------TGA2(1)                --------->ANAC46                                                           --------->bZIP60(1)                --------->ANAC58                            <---------ARR14(2)             --------->TGA2(1)             <---------REM1(2)                              --------->ARR14(2)             <---------bZIP60(1)   <-----------GT1                                         <---------CCA1(2)          --------->At4g35610  <-------TEIL<---------ALFIN1                           --------->YAB1               <---------At4g35610 ---------ARR14(2)                                      <<<<<<<<<ARR2                 ----------->RAV1(2) ---------GLK1(2)           --------->MYB46(3)          <---------ATHB12           <------ZmHOX2a(2) -------->ARR14(2)--------->ANAC46    --------->REM1(1) <<<<<<<<<ARR1             <---------ARR11(3) ----->YAB1 ------>ZmHOX2a(1)   <---------ALFIN1   <-----------GT1<---------ATHB12--------->ARR11(3)   cagattcactcttcctacacacaaaatataacaaacaccttcaccatctattttcacaatcatatccaacaattccaaacagaagatcatctgatgtcat  2051600                                   --------->YAB1                                --------->YAB1                           <---------ICU4                                <--------ATHB1                   --------->GLK1(1)                                <--------HAHB4                ------->GAMYB                                --------->ATHB12             --------->ANAC46                                <---------ICU4             <---------DOF5.7(2)                                --------->ATHB51           --------->MYB52(1)                               <---------ATHB12            <XXXXXXXXXXXXXXXXXXXXMIR779.2                               --------->AHL20(2)         <---------WRKY38(1)                               <---------ATHB51  --------->At4g35610    <---------DAG2                               --------->ICU4    <---------At4g35610 --------------->AGL15                             --------------->AGL15        <---------WRKY45                             <---------------AGL15        <---------WRKY12                            =========================================================MADS_MADS      -           <---------ICU4   <-----------------AGL3   ---------->DOF2 <---------------AGL15     ------   catccaaataccaaaattgcagacatcgatacaataattagaaaccaattcatctcaaagtcaacgaaattccaatttttgcaaaaattcaaaaacccga  2051700                                        --------->DEAR3(1)                                       --------->ANAC58                                    <---------ABI4(2)                                   --------->ANAC58                                   --------->ANAC58                                              <---       <---------LBD16       <---------ANAC46                                                    ----       <-----------RAV1(2)  <---------LBD16                                                <---------ANAC46    <-----------GT1       --------->ALFIN1                                             <---------At4g35610 -------->AHL20(2)    ----------->ARR10--------->ANAC58                            <---------ANAC46 --->LBD16<------ZmHOX2a(1)--------->ALFIN1                                     <---------MYB52(1)   gattatttaccaggagagcgagcgaagagttggggagaagcaccgaagacatcgttgaaattggccttcaaaacatcgaatcgttgtgtagcttcttgga  2051800               <---------ETT(2)               --------->ETT(2)             --------->LBD16            --------->DEAR3(1)            <---------ANAC46       ------>ZmHOX2a(1)     ------>ZmHOX2a(2)     --------->HSFC1(2)     <---------HSFC1(2)     <---------HSFB2a(1)    <------ZmHOX2a(2)   --------->ARR14(2)   <---------ARR11(3)   <---------ARR14(2)                   ------>ZmHOX2a(2)                                 ---------->ID1   --------->ARR11(3)                  <------ZmHOX2a(2)                          ---------->ID1  <---------GLK1(1)                   <---------ARR14(2)             --------->ICU4  <----------DOF2  --------->GLK1(1)                   <---------ARR11(3)     --------->ARR14(2)   --------------->AGL15 ----------->ARR10                    --------->ARR14(2)     <---------ARR14(2)  <-----------GT1 ------At4g35610                      --------->ARR11(3)   --------->LBD16       <-----------------AGL2 ----->At4g35610                    ----------->ARR10    <---------LBD16         <-----------------AGL1   gcagagatccttcgccgtagacaggctcaagagatgtgaagatcgggactgatacttcttccggtttcgccatttttgtagtttctccttttggctctct  2051900                                                                                 <---------WOX13(1)                                                                               --------->ATHB12                                                                               <---------ICU4                                                                              --------->AHL20(2)                                                                              <---------AHL20(2)                                                                             <---------YAB1                                                                           <--------HAHB4                                                                           -------->ATHB1                                                                           <---------ICU4                                                                           <---------AHL20(2)                       --------->ANAC55(2)                                 --------->YAB1                       <---------ANAC55(2)                                 -------->HAHB4   ------>ZmHOX2a(2)                   <-----------HVH21                                       --------->ATHB51<------ZmHOX2a(2)                   <-----------TGA1               --------->ANAC55(2)     <---------YAB1  --------->ARR11(3)                  <---------bZIP60(1)             --------->ANAC58        <---------ATHB51<---------ARR11(3)                  --------->bZIP60(1)             <---------ANAC55(2)     --------->ICU4  --------->ARR14(2)                 ---------->ID1                   --------->ANAC46      <---------ICU4    <---------ARR14(2)             <---------ANAC55(2)     ----------------------->TaNAC69(2)--------->ICU4   --------->DEAR3(1)             --------->ANAC55(2)  <---------TOE2(3)   --------->HSFC1(2)<--------HAHB4 <------NtERF2          <------ZmHOX2a(2)  --------->TOE2(3)    --------->ANAC58     <---------YAB1 ------>NtERF2   ctgtctctctcgatcacttgtcgtcacttaacctctaatgttcacagttatcacgaaacgtcttcgctagagcataattattaattgccaccgatcttat  2052000                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                        --------->LBD16                                       <---------HSFB2a(2)                     --------->YAB1    --------->HSFB2a(2)                    ---------->ID1     <---------ANAC55(2)          --------->AHL20(2)           <---------ANAC46          <---------AHL20(2)     ------>ZmHOX2a(2)         <---------AHL20(2)     <------ZmHOX2a(2)      --------->ARR11(3)       <---------AGP1<---------ARR11(3)      <---------ARR11(3)       --------->ARR11(3)      --------->AHL20(1)       <---------ARR14(2)<---------ANAC58                                <---      --------->AHL20(2)       --------->ARR14(2)<---------ANAC58                                ----      <---------AHL20(2)       <---------ARR11(3)<---------ANAC46--------->ARR11(3)              <---      <---------AHL20(1)       --------->AGP1--------->ARR11(3)  --------->AHL20(1)             -----     --------->AHL20(2)        *TSS   <---------LBD16            <---------AHL20(1)  ------->TEIL<---   ttctaaaatatattaattgtttatcgtatttaagatctgttccggaagatcgcttgtatttatcgaatattttgaattttaaaaatgaatatttgtgaat  2052100                                  --------->LBD16  --------->YAB1                                 --------->ANAC46  --------->TOE2(3)                             ----                                 --------->ANAC55(2)                                             <---   <---------ANAC58              <---------HSFB2a(2)                                             <---   --------->ANAC55(2)           --------->HSFB2a(2)                     <------MYB46(1)        -----   <---------ANAC58              <---------ANAC55(2)                     <------MYB83           ----- --------ARR10                  <---------LBD16  ------->TEIL        <---------MYB46(3)         ----- ----->ARR11(3)        <----------DOF2        <---------YAB1         <-----------RAV1(1)        <---- ------ARR14(2)       ------>ZmHOX2a(2)  <-------MYC3            <---------YAB1                <----- ---->RVE1(1)       <---------ARR11(3)   ------->MYC3    --------------->AtSPL8          <----------DOF2 ------ARR11(3)     --------->ARR11(3)<---------ALFIN1   --------------->AtSPL3 <---------AHL20(2)   atcttacttatccaaaactttcgatcttttggattccggaacacgtttatgaatcttaattcgtactatatttgttggtgattttttttttctttgggta  2052200   <---------YAB1 ------->GT1 ---MYB83 ---MYB46(1) ---->MYB46(2) ---->MYB59       <---------YAB1 ---->MYB111(1)   <---------AHL20(2)                      ------>ZmHOX2a(1)               --------->ZAT6 -----AtMYB61  --------->AHL20(1)        --------->ATHB12<---------MYB59             --------->At4g35610 ---P         --------->YAB1 --------->YAB1 --------->AHL20(2)        --------->ZAT6 <---------At4g35610   ggtttatatttgataaacatattattcccaaaaatgatgttattgattaaaaaacgtttcctaattcttctaacactctatgaattcagataacactaga  2052300                                         <---------ANAC58                                         <---------ANAC55(2)                                         <---------ANAC55(1)                                         --------->ANAC55(2)                                       <-----------GT1                                --------->YAB1                             <-----------GT1                      <---------AHL20(2) <---------ANAC46           ------>ZmHOX2a(1)<---------AHL20(2)          <---------CCA1(2)    --------->DAG2       --------->ZAT18--------->AHL20(2) <---------ANAC58        ----------->GT1    --------->ANAC55(2)    --------->AHL20(2)      ----------->GT1          ---------->DOF2     -----    <---------ANAC55(2)    <---------AHL20(2)--------->ALFIN1------>ZmHOX2a(1)----------->GT1   <----   ttagataagtgtcctagtttgaatttaaatttaatcgtattttacgtgtgtgagagttatatcctatatgtaaaaactaaaagtaatttgagctataaga  2052400                                                                                             <-------                                                                                             --------                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                           <---------ANAC46                                                                                          <---------TOE2(3)                                                                                          <---------TOE1(3)                                                                                         <---------DOF5.7(2)                              --------->LBD16        ------>ZmHOX2a(1)                 --------->DOF5.7(2)        ----------->GT1     <---------LBD16   <---------AHL20(2)            <---------ARR14(2) ---->ARR11(3)      ---------->DOF2    <---------MYB52(1)                   --------->ARR14(2)------- -----ARR11(3)  ----------->GT1    <---------At5g28300              ----------->GT1  <---------ZAT6--   taatactgaatggataaatagtaaaagttttccggttaaccgttgtttttaattcctgcttaattagattgagtaacaaatatgcaagtgttaacgtgta  2052500  Previous    Next  AGI:  At3g06580.1    Description:  GAL1 (GALACTOSE KINASE 1); ATP binding / galactokinase. Identical to Galactokinase (GAL1) [Arabidopsis Thaliana] (GB:Q9SEE5;GB:O24021;GB:O48936); similar to ARA1 (ARABINOSE KINASE), ATP binding / galactokinase [Arabidopsis thaliana] (TAIR:AT4G16130.1); similar to hypothetical protein OsJ_012668 [Oryza sativa (japonica cultivar-group)] (GB:EAZ29185.1); similar to putative galactose kinase [Trifolium pratense] (GB:BAE71243.1); similar to galactokinase [Pisum sativum] (GB:CAF34022.1); contains InterPro domain Ribosomal protein S5 domain 2-type fold (InterPro:IPR014721); contains InterPro domain Galactokinase; (InterPro:IPR000705); contains Inte Range:  from: 2048911    to: 2052031    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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