Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->ZAT2                                            <---------ZAT2                               --------->GLK1(1)                                          <---------LBD16                               <---------GLK1(1)                                       --------->CCA1(2)                               <------ZmHOX2a(2)                                       <------ZmHOX2a(2)                              <---------ARR14(2)                                      --------->AGP1                              --------->ARR11(3)                                      <---------ARR11(3)                              <---------ARR14(3)                                      --------->ARR14(2)                              --------->ARR14(2)                                      --------->ARR11(3)       ------->TEIL           <-----------ARR10                ===================HOX2a_HOX2a  --------->TOE2(3)           --------->ARR14(3)          --------->ANAC46            <---------ARR14(2) ---------TOE2(3)             <---------ARR11(3)         <---------LBD16             --------->GLK1(1) --------DOF5.7(2)           <------ZmHOX2a(1)     <---------ARR11(3)         --------->DOF5.7(2) -------WRKY38(1)         --------->HSFB2a(2)  --------->ANAC58===============================HOX2a_HOX2a -------WRKY45            <---------HSFB2a(2)  --------->ANAC58<------ZmHOX2a(1)<---------DOF5.7(2) -------WRKY12     <---------ZAT14   <---------ARR14(2) <---------ALFIN1   ------>ZmHOX2a(2)      --- --->ANAC58  <---------HSFB2a(2)     --------->ARR14(2)<---------REM1(2) <---------ARR14(2) --------- --->ANAC58  --------->HSFB2a(2)------>ZmHOX2a(2) <---------GLK1(1)      --------->ARR14(2)--------->ANAC46   tcaacgttgaatcttctagagtgttcttcgaggatctccgattcgaagctcgaaatctccacggaggaatacaaggatcggttaacgagatccacggaga  2037400                                           <---------ANAC46                                          --------->ATERF1(1)                                          <------NtERF2                                         <---------ATERF1(1)                                        ----------->HVH21                                        --------->DEAR3(1)                                        <---------DEAR3(1)                                       --------->ATERF1(1)                                       <------NtERF2                                       --------->RAP2.3(1)                                      <---------RAP2.3(1)                                      <---------ATERF1(1)                                      ------>NtERF2                                     <---------ANAC46                                     <---------DEAR3(1)                                     <---------RAP2.3(3)               <---------LBD16      --------->RAP2.6(3)             ----------->HVH21     --------->MYB52(1)                                   --------->HSFB2a(2)         <---------MYB46(3)       ----------->HVH21                                     <---------HSFB2a(2)     <---------YAB1               ----------->TGA1                                     <---------LBD16   <---------ICU4               <---------At4g35610    --------->MYB52(1)              ------>ZmHOX2a(2)   --------->YAB1               --------->At4g35610<------ZmHOX2a(1)                  <------ZmHOX2a(2) --------->ARR11(3)           <------ZmHOX2a(1)   ----------->GT1                    --------->ARR14(2) ------>AHL20(2)           <------ZmHOX2a(1)    <------ZmHOX2a(1) <---------ANAC46   <---------ARR14(2) >LBD16 <--------P       --------->ALFIN1------>NtERF2<---------ARR14(2)  ---------->DOF2       -----   taaaatcatggttgtttgacggagggagaggaggagatgacggcgacggaggaggagaaacggagtttgagtgaaggaaagaagtgagatcgggaaggga  2037500                                                                            --------->At4g35610                                                                            <---------At4g35610                                                                            <------NtERF2                                                                           <---------ERF1                                                                           ------>NtERF2                                                                           <---------ATERF1(1)                                                                           <---------MYB46(3)                                                                          <---------RAP2.6(2)                                                                          --------->ATERF1(2)                                                                          <---------DEAR3(1)                                                                          <---------ANAC46                                                                          --------->DEAR3(1)                                                                         --------->DEAR4(2)                                                                         --------->RAP2.3(1)                                                                         <------NtERF2                                                                         --------->ATERF1(1)                                                                        <---------ATERF1(1)                                                                       --------->DEAR3(1)                                                                       <---------DEAR3(1)                                                                   <---------At4g35610                                                                   --------->At4g35610                                                             <------ZmHOX2a(1)                                                       <---------LBD16 <---------RAP2.3(2)                                                      --------->MYB52(1)<---------DEAR4(2)                                                      -------->P   <---------ZAT2                  --                  --------->LBD16                   --------->MYB46(3)<---------At4g35610          --        --------->O2                                <---------MYB52(2)--------->At4g35610          <-        <---------O2        <--------P  --------->ALFIN1 --------->LBD16<---------RAP2.3(1)      <--- ----->DOF2      <---------ANAC46 --------->ALFIN1--------->AGP1<------ZmHOX2a(1)              ------   aagagaggcgaagtgagagccgtagaaggggttagggtcgaggtggagaacagaactaccggaggaggaagcagcggcggctaagacggactcagagact  2037600                                             <--------P        ------>NtERF2                      <------NtERF2       <---------ETT(2)                   ------>NtERF2      <------NtERF2                       <---------MYB46(3)     <---------ATERF1(1)                  --------->LBD16     ------>NtERF2                       <---------ANAC46    --------->DEAR3(1)                  --------->ATERF1(1)   <------NtERF2                        <---------LBD16   --------->ATERF1(1)           =======================HOX2a_HOX2a   --------->DEAR3(2)            <------ZmHOX2a(2)   --------->RAP2.3(1)          --------->ARR11(3)  --------->ABI4(2)===================HOX2a_HOX2a  <---------ATERF1(1)          =====================================HOX2a_HOX2a  ------>NtERF2    =====================================HOX2a_HOX2a   <---------ANAC46 --------->ALFIN1  ------>ZmHOX2a(2)    <------NtERF2                <------NtERF2                  - ------->LBD16   --------->ARR11(3)    <---------DEAR4(2)     --------->YAB1               ---------- ------->At4g35610<------ZmHOX2a(2)    <---------RAP2.3(1)   <------ZmHOX2a(2) <---------ARR14(2)   < --------At4g35610====================HOX2a_HOX2a===================HOX2a_HOX2a<---------GLK1(2)    - ------LBD16     <---------ARR11(3)   <---------DEAR3(1)  <---------ETT(2)     --------->ARR14(2)   < --->GLK1(2)  --------->YAB1   <------ZmHOX2a(1) <------ZmHOX2a(1)  <---------MYB46(3)     ==========   ccggtgccgacgacaatgagatcgtagttggaaggatcaagcggcgggtaaggagggatgtcgatcatggtggctcgaacagatttgtgtatcaaaagtc  2037700           <---------ZAT14         --------->bZIP60(1)    <---------TGA1a    <---------O2    --------->TGA1a    --------->O2    ========================================MYC_MYB   ------>MYB46(1)   ------>MYB83  --------->MYB52(1) --------->TOE1(2) --------->TOE2(2)         --------->CCA1(2) -------->MYB46(3)      ------>ZmHOX2a(2)             <---------ARR11(3) >DOF2   <---------bZIP60(1)                          --------->ARR11(3) ---------MYB55(2)<---------ANAC46            <---------LBD16              --------->GLK1(2) -------->DEAR3(2)<---------ANAC58          --------->GLK1(2)<---------At4g35610              *TSS ---------MYB52(2)<---------ANAC58  <-------GAMYB   ----------->ARR10  <------ZmHOX2a(1) <-------TEIL =============bZIP_DOF <---------WOX13(1) <---------KAN4(1)  --------->At4g35610 <------ZmHOX2a(1) >>   gaaccaacgtgacttcagtagcttgatcgatacacgagcgttgaataatctgggaagatgttgagatgagtgaggagaatcgaggaagaggttcaagaga  2037800                              --------->ANAC55(2)                    <---------ANAC55(2)    <---------HSFB2a(1)       --------->ANAC55(1)    --------->HSFB2a(1)       --------->ANAC58    <---------HSFC1(2)        --------->ANAC58                            --------->ARR14(2)    --------->HSFC1(2)        --------->YAB1                     <--------P       ----------->RAV1(1) >>>>>>>TBF1 <-----------GT1  --------->ANAC46            ---------->DOF2 <---------ARR14(2)   agaagaagtttcttcttacattacatatacaaacgtaatgggcctaagatgtaaatgaataaaagaggtaagtgtgaatcggcccaacatggcccatctt  2037900                                                                                     <---------WOX13(1)                                                                              ----------->GT1                                                  --------->AHL20(2)       <-----------GT1                                     <---------TOE2(2)                     --------->MYB52(1)                                     <---------TOE1(2)               --------->AHL20(2)                       <---------ZAT14<---------YAB1         <---------AHL20(2)   <---------AHL20(2)                <---------ZAT14    --------------->AGL15<---------YAB1   <---------AHL20(2)       ---   cttaatcaacgcatagactatagggtctactgtttttcttatgttagaaacttaaaatatgatttttttttttatataaacggtttaattgaagaaaata  2038000                           <-----------HVH21                                                   <-----                     --------->ZAT14          ----------->GT1                                  ------                     <---------ZAT14     --------->YAB1                                       <------                    <----------DOF2 <---------ZAT18                 <----------DOF2      <---------AHL20(2)    <-----------GT1 <---------DAG2  --------->ZAT18              <---------AHL20(2)     --------->AHL20(2) -------->GT1   <---------ZAT18    --------->PCF5      --------------->AtSPL8    ---------->DOF2   --   gagtttatactttcttcgttcactttactggtcagtggtccacttataatgtgattttttgaactattttctttgttgaatataaaagaattttatatat  2038100                                                             --------->GLK1(2)                                                             <---------ARR11(3)                                  <---------GLK1(1)          --------->ARR14(3)                                  --------->GLK1(1)          --------->ARR11(3)                                 --------->ARR11(3)          <---------ARR14(3)      --------->YAB1                                 <---------ARR11(3)          --------->ARR14(2)      -------->HAHB4                                --------->HSFB2a(1)      --------->YAB1           --------->YAB1 ----                        <------------CBF                <---------YAB1           --------------->AGL15         --------->DAG2--------->ATHB12              <---------YAB1           <-----------GT1  <-----        ---------->DOF2<---------ICU4             <---------YAB1          <---------DAG2     -------- ----ARR11(3)         <---------YAB1          <-------GAMYB  <---------ARR14(2)  <---------------AGL15 --->ARR11(3)         --------->ICU4         --------->MYB52(2)           <----------DOF2   <-------- ---CCA1(2) <---------ZAT6  <---------ANAC46 <---------MYB46(3)       --------->MYB46(3)    --------- --------->GT1      ---------->DOF2   <----------DOF2--------->ICU4 <-----------GT1 <---------YAB1   cttgaaaaaaaaaagtgttagataaagattgcgaagatttcttttgtttgttgtgattatgaaaatcttctaaccacttttaactaataatagagatata  2038200                                      ---------->DOF2        <---------HSFB2a(2)          --------->AHL20(2)        --------->HSFB2a(2)     --------->AHL20(2)       <---------LBD16     <---------MYB52(2) <---------GLK1(2)         <---------MYB59 ----->ANAC46              <------------MYB.PH3(2)                      <---------AHL20(2) ------GT1                 <---------MYB46(2)                          --------->AHL20(2)       ----- ->CCA1(2)               <-----------GT1                         ------>NtERF2    --------->ARR14(2) -ARR11(3)           <---------ARR14(2)       ----------->GT1--------->ANAC46     <---------ARR14(2) >ARR11(3)    ---------->DOF2--------->MYB52(1)         --------->ARR14(2)     --------->ANAC46------   ccacattcttctggataaaagcagatttaactaactaaataaaagaaatcgaaaaacgaattcacgacgactattaaatctccgaaaccccatagtccta  2038300  Previous    Next  AGI:  At3g06540.1    Description:  GDP dissociation inhibitor family protein / Rab GTPase activator family protein. similar to ATGDI1 (Arabidopsis thaliana guanosine diphosphate dissociation inhibitor 1) [Arabidopsis thaliana] (TAIR:AT2G44100.2); similar to ATGDI1 (Arabidopsis thaliana guanosine diphosphate dissociation inhibitor 1) [Arabidopsis thaliana] (TAIR:AT2G44100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14489.1); contains InterPro domain Rab protein geranylgeranyltransferase component A, eukaryota (InterPro:IPR016664); contains InterPro domain Rab GTPase activator; (InterPro:IPR002005); contains InterPro domain Yeast Mrs6p protein; (InterPro:IPR00 Range:  from: 2035009    to: 2037794    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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