Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->TOE1(3)                             <---------------AtSPL8                             <---------------AtSPL3                             --------------->AtSPL8                          ---------->DOF2                       <---------------AGL15                       --------------->AGL15                                                        <                       <---------HSFB2a(2)            <---------YAB1                                <                       --------->HSFB2a(2)      <------MYB83                             ------>ZmHOX2a(2)     ----------->RAV1(1)--------->LBD16         ----------->GT1          <---------HSFB2a(1)        -    <----------ID1    ----------------->AGL1    <------MYB46(1)          --------->HSFB2a(1)        < ------>HSFC1(1)  <---------HSFC1(2)          <-----------RAV1(2)        <---------HSFC1(2)      ---- ------>HSFB2a(2) --------->HSFB2a(1)      --------->ANAC46              --------->HSFC1(2)    ------ -------HSFC1(1)  --------->HSFC1(2)      --------->RAP2.6(3)         <------ZmHOX2a(1)  ============ -------HSFB2a(2) <---------HSFB2a(1)    --------->MYB52(1)           ==========================HOX2a_HOX2a   ctagaaacaacaaaattcgaaactcccagaaagagtaccttcaaaacggcaggtttatcagagagaccataaggaagcgtctggagttcgatcgctctcc  1992400               <---------ZAT2               --------->At4g35610        --------->GLK1(2)        <---------ARR14(2)        --------->ARR14(2)    ------>NtERF2   <---------ANAC46  <------NtERF2<---------At4g35610  --------->ATERF1(1) <---------ATERF1(1) ------>NtERF2 <---------HSFB2a(1) ---------DEAR3(1) ---------RAP2.3(3)                                                                         <-------- ---------->HVH21                                <---------GLK1(2)                  --------->ANAC55(2) ---------ETT(2)    ------>ZmHOX2a(1)      --------->YAB1                 ------>MYB83<---------CCA1(2) -->ZmHOX2a(1) --------->HSFB2a(1)      --------->GLK1(1)     <------MYB46(1)       <---------ANAC55(2) ----->RAV1(2) --------->HSFC1(2)  --------->At4g35610        <------MYB83------>MYB46(1)   <-------- ===HOX2a_HOX2a<---------HSFC1(2)  <---------At4g35610------>ZmHOX2a(1) <---------MYB59------->TEIL   tggcgacgcgaatcggaagctccttatgcaaaaactgagcagaaatcaaaagattcctctcagtaggtttggaaccaaactccatcatgtatctaaggct  1992500                    ------->GAMYB                  -------->P                             <---------HSFB2a(1)              --------->ANAC58                           --------->HSFB2a(1)              --------->AtLEC2                      <---------HSFB2a(2)   --------->ZAT14     <---------MYB52(1)                           <---------LBD16<---------TOE2(2)    <---------MYB52(1)                   <------ZmHOX2a(2)       <---------TOE1(2) -TOE1(3)     --------->ANAC58   <---------ARR11(3) --------->HSFB2a(2)   <---------ZAT14 -TOE2(3)     --------->ANAC46   --------->ARR11(3)<---------LBD16   <----------DOF2   aacaccggtttgcttcatgcaaccccatttgtgaacatcttcgatcaaactcttcgggaacatttcgcaggctttcttcactgccataagcgtctaagag  1992600                               ------>NtERF2                               <---------ATERF1(1)                              --------->DEAR3(1)                            ------>NtERF2                            <---------ATERF1(1)                            <------NtERF2                           --------->ANAC58                           --------->ANAC58                           <---------ALFIN1                           --------->ANAC46                          --------->DEAR3(1)                         --------->ATERF1(1)                         <------NtERF2                        <---------ATERF1(1)                        <---------SPL7                        ------>NtERF2                       --------->DEAR3(1)                       --------->ETT(2)                                                            --               --------->TOE1(3)                                                                  <--               --------->TOE2(3)                       --------->YAB1                      <---------ZAT18         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------->YAB1                      <------MYB46(1)     <---------ICU4 <---------TGA1a                --------->ICU4                       <------MYB83     --------->ATHB12<-----------HVH21          <---------MYB52(1)                     <---------AtMYB61     -------->HAHB4 --------->TGA1a            --------->At5g28300                     <---------MYB46(3)    <---------YAB1  --------->O2   <---------MYB52(1) <---------YAB1---------->DOF2   <---------WOX13(1)    <---------ATHB12<---------O2  --------->LBD16  <---------YAB1 --------->ANAC58  --------->ATHB12    --------->ICU4--------->MYB52(1)       <---------ALFIN1       --------->ANAC58 <---------YAB1 ---   agagaaatgattagaaaccctaacgtcgcccgcctccgtcgttctccaccgttattatcatcgactggacgaaagaagtgcgaagatgattggtggacat  1992700                                                   <---------At4g35610                                                  *TSS                                                --------->At4g35610                                                <---------At4g35610                                               --------->ALFIN1                                              <-------MYC3                             <---------ANAC58 <-------MYC2                                <---------ANAC46                             <---------ANAC58 ------->MYC3                                <---------ANAC58                             <---------ANAC46 ------->MYC2                                <---------ANAC58                        <----------DOF2       ------->MYC4                        <---------MYB52(1)                       <---------ANAC58 --------->YAB1                           --------->At4g35610                       <---------ANAC58<---------ATHB12                          <---------At4g35610 ------->LBD16    --------->ARR14(2)  --------->ANAC58                           <------NtERF2 -------HSFB2a(2) <---------ARR14(2)  --------->ANAC58       <---------MYB52(1) --------->RAP2.6(2) ------>HSFB2a(2)<------ZmHOX2a(1)   --------->WOX13(1)  --------->ARR11(3)    <---------RAP2.6(2)  <   ccagaaacagagaagaagaggattggctttggcttatggcaatcaacatgtgctgctaatatcgttgttttttttgttttggccgctaattttcttggat  1992800                                         <---------MYB59                                         <---------------AGL15                                         --------------->AGL15                                        <-----------------AG                                        --------->ANAC55(2)                           --------->AHL20(2)                        --------->ARR11(3)                        --------->AHL20(1)      <------MYB83                                    <----                        <---------AHL20(1)      ----------->GT1                    <------------MYB.PH3(1)               <---------HSFB2a(2)      ----------------->AG                      <---------At5g28300               --------->HSFB2a(2)      <-----------------AGL1                   --------->MYB52(1)              <---------LBD16           <-----------------AGL2                   <-----------GT1-----           <----------DOF2 <---------AHL20(2)   <------MYB46(1)                <---------KAN4(2)<----         =================================================MADS_MADS       ---------->DOF2   ---------         <---------------AGL15          ----------------->AGL2        <---------ANAC46 --------->ARR14(2)         --------------->AGL15          ----------------->AGL1        <---------ZAT6   <---------ARR14(2)      <-----------GT1   <---------ARR11(3)     --------->MYB59   <-----------RAV1(1)------->GAMYB ------ZmHOX2a(1)     ------->TEIL    <-----------GT1        <----------DOF2  --------->YAB1<--------   taggatttttactctttctggatgaatatttttttagtatttacctgatttggtaaaaagtttctttttgttgtgttaaagaataaccgtatatttattt  1992900                        ----------->GT1                        <---------ANAC55(2)                    --------->YAB1                    <---------AHL20(2) <---------AHL20(2) --------->AHL20(2) -----AHL20(2)   --------->YAB1           --------->TOE2(3)    --------->At4g35610 ---->AHL20(2) --------->AHL20(1)        ----------->GT1      <---------ARR11(3)      <-----------GT1 -----AHL20(1) --------->AHL20(2)       <---------TOE2(3)  <-----------GT1  <---------ANAC58        < >AHL20(2)    --------->YAB1 --------->ICU4   <-----------GT1 --------->ARR11(3)<----------DOF2     - -AHL20(2)  --------->AHL20(2)   --------->YAB1          --------->AHL20(2) <---------ANAC58<--------   tattttatgtaagaaaaaataataatatgtaaaaatcaaaataatgttaaactgttcaaataaacatctcactagtttgcttcttttttttccacaatct  1993000                                                                                       --------->TOE2(3)                                                                                 ==============HOX2a_HOX2a                                                                                 ------>ZmHOX2a(2)                                                                                <---------GLK1(1)                                                                                <------ZmHOX2a(2)                                                                                --------->GLK1(1)                                                                                ===============HOX2a_HOX2a                                                                               <---------ARR14(2)                                                                               --------->ARR14(3)                                                                               --------->ARR11(3)                                                                         <-----------GT1------>ZmHOX2a(1)       <---------ANAC58                                              --------->TOE2(3) <---------ANAC58       <---------ANAC46                                              --------->TOE1(3) <---------ANAC58       <---------ANAC58                   ---------->DOF2   --------->ARR11(3) --------->ARR14(2) <---------AHL20(2)                <---------WOX13(1)       <---------ARR11(3) <---------AGP1-------- ---------AHL20(2)               --------->ATHB12          --------->RVE1(1)   <---------ARR11(3) -------->AHL20(2)              <---------YAB1             --------->CCA1(1)   <-----------ARR10 -GLK1(2)                     --------->CCA1(2)   <-------TEIL>>>>>>>>>RAP2.2  <---------ARR14(3)   cattaatttgcttagaattctaaattcaaacgatatgattgagaaaaagatgtgcatcaaaatatctaaaactttaaacaagatctcttccttatccaca  1993100     ------->MYC3     <-------MYC3     <XXXXXXXXXXXXXXXXXXXMIR3434*    <---------O2                                                 >>>>>>>>>GATA-1     <---------ETT(2)    --------->O2                      ----------->GT1      <-------TEIL       --------->DAG2   <----- ->ANAC46                ----------->RAV1(1)        <------ZmHOX2a(2)       ---------->DOF2 <--------   atttccacatggctgaagttctaaatccaacatataaaaacagtatatagttcgatccatatacatagataaatgtccaaaaggctatcgacccgttctt  1993200                       --------->ANAC58                                                            <-                       --------->ANAC46         <---------AHL20(2)          --------->TOE2(3)  ------                       --------->ANAC58       <---------YAB1        ----------------->AG       <-----       ---------->ID1<---------ATHB12        <---------AHL20(2)--------->ANAC46      --------->ZAT14< -----DOF2           ---------->DOF2       <---------YAB1   --------->ZAT18----------->GT1     ------ -MYB52(1)  ---------->DOF2           <----------DOF2  --------->AHL20(2)  --------->YAB1      <-----   ttgatatttggccctaaagcccaataagccataacataagcttttattattttaaaaaaaaatgcacaaaaccaaaatcgtaaattgtatagtctaatat  1993300  Previous    Next  AGI:  At3g06483.1    Description:  PDK (PYRUVATE DEHYDROGENASE KINASE); ATP binding / pyruvate dehydrogenase (acetyl-transferring) kinase. similar to mitochondrial pyruvate dehydrogenase kinase isoform 2 [Glycine max] (GB:AAT02656.1); similar to mitochondrial pyruvate dehydrogenase kinase [Brassica napus] (GB:ABA25867.1); contains InterPro domain Histidine kinase; (InterPro:IPR005467); contains InterPro domain ATP-binding region, ATPase-like; (InterPro:IPR003594); contains InterPro domain Histidine kinase related protein, C-terminal; (InterPro:IPR004358) Range:  from: 1990422    to: 1992750    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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