Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          ------>MYB83                                                                                       --------->MYB52(1)                                                                                      --------->TOE2(2)                                                                                      ------->GAMYB                                     ------>ZmHOX2a(2)                                --------->AtMYB61                                   <---------ARR11(3)                                <---------MYB52(2)                                 <---------YAB1                                      --------->MYB46(3)                               <---------ICU4                                        --------->DEAR3(2)                               --------->YAB1                                        <---------MYB55(2)                    <---------ANAC55(2)                                             -------->P         <---------AHL20(2)   <---------YAB1                                        ------>MYB46(1)      <---------AHL20(1)    <---------ICU4                                          ------>MYB83  ---      --------->AHL20(1)    --------->YAB1                                          --------->ANAC58     --------->AHL20(2)--------->AHL20(2)  <---------GLK1(2)             ----------->RAV1(1)   <----- -------ID1<---------AHL20(2) --------->ICU4               <-------TEIL --------->ANAC46------>MYB46(1) --->At4g35610  <-----------HVH21--------->ICU4   <---------YAB1<----------DOF2     --------->ANAC58<   tgacaaaatatataaaaatgtcacataaaatcatcatgatcgtctgattcttcttattgcatacatctttctatacaacatttgccaaccaacgtttctt  1983800                                                                             ------>MYB83                                                                           <---------MYB111(1)                                                               --------->AtMYB61                                                              --------->MYB46(3)                                                    <------MYB46(1)        <---------MYB46(2)                                                    <------MYB83           <---------MYB59                                                    <---------MYB46(3)     --------->MYB46(3)                                                   <---------AtMYB61       --------->AtMYB61                                           -------->P        <<<<<<<<<<<<<<<<<LFY                                           --------->MYB52(1)-------->P  --------->SPL7                              --------->AHL20(1)  <--------P--------->WOX13(1)  <------ZmHOX2a(1)           <---------AHL20(1)--------->ALFIN1       <---------SPL7     <---------YAB1  --------->ATHB12          <---------AHL20(2)  <---------ZAT6<---------MYB55(2)      <----------DOF2 ------->DOF2               <---------AHL20(1)  <-----------RAV1(1)  --------------->AtSPL8 -----DOF2    <---------TOE2(3)            ------>MYB46(1) --------->MYB46(3)------>MYB46(1) <------- ---------TOE2(3)          --------->YAB1  ------>MYB83<-------TEIL  --------------->AtSPL3--------->YAB1   taaaggattggacactgagattagttctataatattttttatgcctaccagtgttggttcatcaaccactggtcgtaccaaaccctctctttatgataat  1983900                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                   --------->At4g35610                                         <-----                                <---------At4g35610                                            ------                                --------->At4g35610                                            <-----                                ------>NtERF2                                                 -------                               <---------DEAR3(1)                                             <------NtERF2                               --------->RAP2.3(2)                                           <-------                               --------->DEAR3(1)                                            <-------                              --------->ATERF1(1)                                            <-------                              <------NtERF2                                                  <-------                              --------->RAP2.3(1)                                            ------>NtERF2                              --------->DEAR4(2)                                             <-------                             <---------DEAR4(2)                                              <-------                             ------>NtERF2                                                   <-------                             <---------ATERF1(1)                                            <--------                             <---------RAP2.3(1)                                            <--------                            --------->DEAR3(1)                                              <--------                            <---------DEAR3(1)                                              <--------                            --------->RAP2.3(3)                                             ---------                            --------->RAP2.6(2)                                            <---------ABI4(1)                            --------->RAP2.3(2)                                            --------->ATERF1(1)                           --------->RAP2.3(1)                                            <---------RAP2.3(1)                           --------->DEAR3(2)                                            <---------DEAR3(1)                           --------->ERF1                    ------>ZmHOX2a(1)   <---------LBD16<----                           --------->RRTF1(1)    <---------ARR14(2)              --------->MYB52(1) <------ZmHOX2a(1)         --------->ATERF1(1)   --------->ARR14(2)          <<<<<<<ZML2--------->SPL7 --YAB1 ----------->HVH21 <---------ATERF1(1)   <---------CCA1(2)     --------->LBD16  <---------ATERF1(1)   ggaggagagagtgaccacggtttttaagagccgccgctgctacaatgggcctatctcgtagtcctcataaaccgggctagaactacgggctacggcggcg  1984000 ----->ALFIN1                                                                                      -- ---NtERF2                                                                                        <-- ----->ATERF1(1)                                                                                 ---- ----ANAC46                                                                                     ----- ----O2                                                                                        <----- ----ANAC58                                                                                    ------ ----ANAC58                                                                                    <----- --->O2                                                                                       <------ ----TGA1a                                                                                 --------->HSFB2a(2) --->ALFIN1                                                                                <---------HSFB2a(2) ----bZIP60(2)                                                                            <---------LBD16 -->ATERF1(1)                                                                        --------->ARR14(2) --DEAR4(2)                                                                          <---------ARR14(2) --RRTF1(1)                                                                          --------->ARR14(3) --RAP2.6(1)                                          --------->ANAC46               <---------ARR11(3) --ATERF1(1)                                        <-----------GT1                  --------->AGP1-- --ORA47(2)                                      <---------YAB1                      <---------ARR14(3) --RAP2.3(1)                                  <---------AHL20(2)                     <---------GLK1(2) --ERF1                                      --------->YAB1              ----------->GT1 ----------->RAV1(2) -RRTF1(3)                                 --------->AHL20(2)           ----------->GT1  ------>ZmHOX2a(1) -RAP2.3(2)                                --------->AHL20(1)    <---------------AGL15 ------>ZmHOX2a(2) -DEAR3(1)                          --------->At4g35610          --------------->AGL15<------ZmHOX2a(2) -RAP2.3(3)          ----------->RAV1(1)   <---------AHL20(1)    ==================================== >DEAR3(1)--------->MYB46(3)   <---------CCA1(2)--------->AHL20(2)    ---------->DOF2--------->ARR11(3) -----ATERF1(1)     --------->MYB46(3)    --------->YAB1     <---------ZAT14       ----------->ARR10   tggcccaattcaacaaataacaacaacagtagcatatcatctaaatataatattatacgatactatacttaaaaaagataaaaacaagatcctctgggac  1984100                                                                          *TSS                                                                         <---------At4g35610                                                                         --------->At4g35610                                                                       <---------WRKY12                                                                      --------->DOF5.7(2)      --------->AtLEC2                                               <-----------HVH21    --------->YAB1                                                   --------->TOE1(3) <----------DOF2           --------->ANAC58                          --------->TOE2(3) ---->MYB83                --------->ANAC58                         --------->ANAC46               -- -------ALFIN1           <--------P                        <---------ARR14(2)                      <- ----->MYB46(3)       --------->MYB59                      --------->ARR11(3)              <------NtERF2 ---->TCP15(2)     <------------CBF                        <---------ARR11(3)              <--------- ----TCP20      ----------------->AGL1                     --------->ARR14(2)             <---------RAP2.3(1) --->PCF2       ------------>CBF           <---------At4g35610      --------->ANAC58      ------>NtERF2 ----TCP15(1)  <-----------------AG      --------->REM1(1) <---------ARR11(1)            <---------DEAR3(1) ---PCF2       <-----------------AGL1  ------>ZmHOX2a(1)  <---------CCA1(2)------->GAMYB <---------At1g77200 ---->MYB46(1) ----------------->AGL1------>ZmHOX2a(2)    <---------ARR14(1)  --------->LBD16    <--- ================================MADS_MADS <---------CCA1(2)        --------->ANAC58   <-----------HVH21   ccactttcatgaaaattagccaattgggtaagcctttgatccttcatctctcgctaaaccatatcttcaaacgtcaactccccaaacttcgtcggcgatt  1984200                                                    ------>MYB46(1)                                                  ------->GAMYB                                                  <---------ALFIN1                                         <---------ANAC58                                         <---------ANAC58 --------->REM1(1)                                    ------>MYB83  --------->AtMYB61                                    --------->MYB52(1)  <---------ALFIN1 --------->LBD16                    -------->P   <---------MYB55(2)                ----------->GT1  < --------->RAV1(2)             <-----------GT1   --------->MYB46(3)            ------>ZmHOX2a(2)   <- --------LBD16              <----------DOF2    <---------DOF5.7(2)      <---------ANAC58          <-- ------------WRI1         ------>ZmHOX2a(1)  --------->DOF5.7(2)        <---------ANAC58     -------- --------GT1        <-----------GT1 ------>MYB46(1) ------>MYB83        <---------ANAC46     <-------   caccggaggctatggcatcaatttactcctctttaacctactggctcgttaaccacccctacatctccaattttacttggatcgaaggtgaaaccctagg  1984300                                                     ===============HOX2a_HOX2a                                                <-------MYC3                                                ------->MYC2                                                <-------MYC2                                                ------->MYC3    ------>NtERF2                                               --------->ANAC58 --------->LBD16                                               --------->bZIP60(2)                                  -                                               --------->ANAC58--------->ANAC46                  ----                                               --------->TGA1a --------->ANAC58                  <---               --------->ARR14(2)             ------>NtERF2    --------->ANAC58                  ----               <---------ARR14(2)            <---------ALFIN1 ------>ZmHOX2a(2)                 <----              <---------CCA1(2)            --------->LBD16    --------->MYB46(3)              -------       ==================================================bZIP_DOF --------->DEAR3(1)          -------       <----------DOF2                     ------>NtERF2=============HOX2a_HOX2a              -------   --------->DEAR3(1)                     --------->ANAC58   <------ZmHOX2a(2)                ------- ---------ALFIN1                          --------->ANAC58  <---------ARR14(2)                ------- --------ABI4(2)   --------->LBD16        --------->ANAC46  --------->ARR14(2)                ------- -------ATERF1(1) --------->ANAC46       <---------LBD16------>ZmHOX2a(1)                  <---------WRKY38(1) ->STY1(1)  <---------ANAC58     --------->WRKY12    ================HOX2a_HOX2a           <---------ZAT18 --STY1(1)  <---------ANAC58    <---------MYB52(1)   ------>ZmHOX2a(1)            <---------ATHB12  -   ctccaccgtctttttcgtatccgtcgtagtctccgtttacctctccgccacgttcctcctccgatccgccatcgattcactcccatcactcagtccacgt  1984400                                                                                            --------- ================HOX2a_HOX2a                                    ===================================== ------>ZmHOX2a(1)   <---------ALFIN1                          <---------DEAR3(2)           --------- -------->TOE1(3)   --------->ETT(2)                           <---------MYB46(3)           --------- --->TEIL           <---------ETT(2)                           --------->MYB55(2)           --------- ------ARR14(2)   <---------RAP2.6(3)                          --------->MYB52(2)           <-------- ----->ARR14(2)   --------->ORA47(1)                          <---------DEAR3(1)            --------- -----CCA1(2)    --------->DEAR3(1)                          <---------MYB52(1)             ========= -->O2   <-----------HVH21                                   <------NtERF2                  --------- -->ANAC58     <---------At4g35610                          ------------>AtMYB77            <-------- -->ANAC55(2)  --------->At4g35610              ------>ZmHOX2a(1)  <---------ZAT18       ----------->HVH21 -->ANAC46===============================HOX2a_HOX2a        ========================================= -->ANAC58<------ZmHOX2a(2)                    --------->TOE2(3)<-------GAMYB          --------->At4g35610 -->ANAC55(1) --------->DEAR3(1)  ------>ZmHOX2a(1)  <---------ICU4--------->ZAT18     <---------At4g35610 -------->TOE2(3)--------->RAP2.6(2)       ------>ZmHOX2a(1)<-----------HVH21      --------->TOE2(3)   atcctcaaaccgatcacagccgtccacagcctaatcctctgtctcctctccttagtcatggccgtcggttgcactctctcaataacctcatctcacgcgt  1984500     ------>ZmHOX2a(2)    --------->CCA1(2)   --------->AGP1<---------ARR14(2)   --------->ARR14(2)    --------->ANAC58                 --------->MYB46(3)   <---------ARR14(2)    --------->ANAC55(2)             >>>>>>>>>MYB98  <---------At4g35610    --------->ANAC46               ------>MYB46(1) >ANAC58         --------->ARR14(2)                     --------->MYB52(1) =MYC_MYB      <----------DOF2                  --------->DOF5.7(2) >ANAC58      <------NtERF2                <---------DEAR3(1) >O2--------->ARR14(1)   --------->ANAC58  <---------ETT(2)----------->HVH21 >ANAC55(2)  ------>NtERF2                 --------->ETT(2)------->GAMYB -O2<------ZmHOX2a(2)<-----------HVH21     --------->DEAR3(1) >ANAC46    <---------ANAC58             --------->LBD16------>MYB83                                - =========================bZIP_DOF <----------DOF2     --------->MYB55(1) --------->HSFB2a(2)       - >TGA1a     <---------ANAC46      <---------ANAC58    <---------MYB59   ----------->RAV1(2)        -- -TGA1a     <---------ANAC58      <---------ANAC58 <-----------GT1<----------DOF2              ------ =MYC_MYB<---------DEAR3(1)  --------->ARR14(2)--------->TOE2(3)  <---------DAG2               <-----   cttcagatccgatggcgcgtttccttcacgcgatttgctttcccgtcgacgttaaacctaacggaccgcttttcttctgggctcaagtcttctacctctc  1984600                                                                                 --------->ANAC46                                                                                 --------->ANAC58                                                                                 <---------O2                                                                      ------->PIF5                                                                      ------->MYC4     =========================HOX2a_HOX2a                             <-------MYC4     ------>ZmHOX2a(1)                                                ------->MYC2   ------>ZmHOX2a(2)                                                  <-------PIF5   ==============================HOX2a_HOX2a                          <-------MYC2          <--------  <------ZmHOX2a(2)                                                   <-------MYC3        <---------MYB46(3)  ===============================HOX2a_HOX2a                         ===========================MYC_MYB --------->ARR11(3)                                                  --------->TGA1a    <-------GAMYB <---------GLK1(2)                                                   <---------O2--------->O2 --------->ARR14(2)                                                  ============================MYC_MYB <---------ARR14(2)           --------->YAB1                         <---------TGA1a   <---------MYB46(3) <---------ARR11(3)          <---------YAB1                          <---------ANAC46 <---------DEAR3(1) --------->ARR14(3)       ------>ZmHOX2a(1)                        <---------ALFIN1 --------->MYB52(1) <---------ARR14(3)    <------ZmHOX2a(2)                <---------GLK1(1)   --------->AtMYB61 -------->GLK1(1)     <---------ARR11(3)          --------->MYB52(1) --------->O2--------->ANAC58 -------->HSFB2a(1)   --------->ARR14(2)     --------->WOX13(1)  ------>ZmHOX2a(1)  ------------>AtMYB77 --------->ARR10      <---------ARR14(2)   <---------ATHB12  ------>ZmHOX2a(1) <---------ALFIN1   --- --->HSFB2a(2)      --------->ANAC58  <------NtERF2     --------->GLK1(1)  --------->MYB46(3) <------ ----HSFB2a(2)      --------->ANAC58--------->ANAC46--------->MYB46(3)------->MYC3 ----------->HVH21   gaagatcctcgagttcggagacacgatcctcatcatactcggcaaatcaatccaacggctatccttcctccacgtgtaccaccacgcgacggttgtggtc  1984700  Previous    Next  AGI:  At3g06460.1    Description:  GNS1/SUR4 membrane family protein. similar to GNS1/SUR4 membrane family protein [Arabidopsis thaliana] (TAIR:AT3G06470.1); similar to GNS1/SUR4 membrane protein [Medicago truncatula] (GB:ABD32385.2); contains InterPro domain GNS1/SUR4 membrane protein; (InterPro:IPR002076) Range:  from: 1982665    to: 1983720    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g06470.1    Description:  GNS1/SUR4 membrane family protein. similar to GNS1/SUR4 membrane family protein [Arabidopsis thaliana] (TAIR:AT3G06460.1); similar to GNS1/SUR4 membrane protein [Medicago truncatula] (GB:ABD32385.2); contains InterPro domain GNS1/SUR4 membrane protein; (InterPro:IPR002076) Range:  from: 1984174    to: 1985265    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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