Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ARR11(3)               <---------MYB59 ------ZmHOX2a(2)        --------->YAB1 --------ARR11(3)       <---------ATHB12         <---------YAB1 ------->ARR11(3)     --------->WOX13(1)--------->At4g35610 -->TOE1(2)   --------->ANAC46          <---------At4g35610                           --------->YAB1 -->TOE2(2)   --------->ANAC58     <----------DOF2                               <---------ATHB12 -->TOE2(3)   --------->ANAC58 --------->YAB1  --------->YAB1                  --------->WOX13(1)  --   agatcatcaacaaaatacccaattcaatcaaaatcatctttcagctaaattatactcgtgattcaaaattgagttcaaattcaatcaaacatgaacgaga  1957900                                      <---------DAG2                                      <----------DOF2                               --------->MYB46(3)                             <-----------GT1                                                      <--                        <---------ANAC58                             ----------->TGA1    <---------MYB52(1)                        <---------ANAC58                             ----------->HVH21   --------->DOF5.7(2) ----------->GT1      <---------ARR11(3)              ------>ZmHOX2a(2)        <-----------GT1    <-- --------->GT1        --------->ARR11(3)             <------ZmHOX2a(2)  <---------DEAR3(1)    <------   agagagaaaatcgaaatacctcgagagcttgtaaccactgctttttggcgatgagatcggacaaagtttcagtgacggtgttaacccatccgttagcttt  1958000                                                                          --------->GLK1(1)                                                                     --------->LBD16                                                                 <---------ARR14(2)                                                              <---------MYB52(1)                                                             --------->LBD16                                                            <---------ANAC55(2)                                                            <---------ANAC46                                                           <------NtERF2  --------->ARR14(2)                                                          ------>NtERF2   <---------GLK1(1)                                                         <---------ARR14(2)                                                     <---------LBD16 <---------LBD16                                                   <-----------GT1  <---------ANAC46      <-----------HVH21                          <---------WOX13(1) <---------LBD16     ------>ZmHOX2a(1)                --------->ARR11(3) --------->ARR14(2)      ------>NtERF2   ----------->RAV1(2)                <---------ARR11(3)--------->ZAT2--------->LBD16    ---------->DOF2 -------ANAC58                       --------->GLK1(1) <---------ATERF1(1)<---------ARR14(2) -------ANAC58              <----------DOF2   <---------YAB1--------->ANAC55(2) --------->DEAR3(1) ----DOF2        <<<<<<<<<TBF1       <---------GLK1(1)------->GAMYB<---------LBD16  <----------DOF2   gcttctcctgtcaagtttcttcttcacattctttatcggagttcttctctgattaaccggctccgtgattccggggaattcgccgtctttccaaagcctc  1958100                                                                                                 ----                                                                                                 <---                                                <---------TOE2(3)                               <----                                               --------->MYB52(1)            ------>MYB46(1)  -------                                             <---------MYB52(2)              ------>MYB83 --------->LBD16                                            <---------At4g35610      <---------bZIP60(1) <---------LBD16                      <---------ARR11(3)   ------->TEIL              --------->ANAC58    --------->HSFB2a(2)               --------->LBD16          --------->ANAC58             --------->bZIP60(1) <---------HSFB2a(2)              --------->LBD16 --------->At4g35610                    --------->ANAC58   <---------ANAC46             <---------LBD16  --------->ZAT2--------->At4g35610   ----------->TGA1      <---------LBD16             <---------HSFB2a(2)        --------->ANAC58  --------->O2     --------->TOE2(2) <-------             --------->HSFB2a(2) --------->At4g35610      <---------ALFIN1 --------->AtMYB61 --------       <---------ALFIN1       <---------At4g35610    ------>NtERF2----------->HVH21    <---------LBD16       --------->ZAT6 --------->ARR11(3)--------->ANAC46<---------ALFIN1   --------->TOE1(2) <-------   ttcttcgtaacacttcccggagaagatttcgaagcagccaaaacgcatctaacgatgcccacatctctgtgacgaaacctacgcttaccttcggggattc  1958200                                                                   <-----------HVH21                                                              <---------ZAT14                                                              --------->ZAT14    ------->TEIL                                            --------->ANAC58 ----->HSFB2a(2)                               ----------------------->TaNAC69(2) ------HSFB2a(2)                      ------>NtERF2         --------->bZIP60(2)                 ----- -----LBD16                          --------->ANAC58       --------->ANAC58                --------- -->GLK1(2)                          --------->ANAC58       --------->ANAC46          --------->KAN4(2) --ARR14(2)                          <---------bZIP60(1)  <---------ALFIN1      <---------TOE2(3) ->ARR14(2)        ---------->DOF2   --------->bZIP60(1)  --------->ANAC46      <---------ANAC46<---- --GLK1(2)     >>>>>>>>>TBF1         --------->ANAC46 <-----------HVH21        <---------LBD16<------   tggatgaacatagcgaagaagaaaaggagagagacattgacgccatcgtcttcttccttcacacctcactgtcactctgtttacggataattcccgtcga  1958300                                                --------->ARR14(2)                                              --------->LBD16                                          --------->ARR14(2)             --------->ARR14(2)           <---------ARR14(2)             <---------ARR14(2)           ------>MYB46(1)           <------MYB46(1)                ------>MYB83                                         ------         <---------MYB52(1)               --------->MYB52(1)                           ------>ZmHOX2a(2)        <-------GAMYB                   <---------MYB59                                ----------->GT1     *TSS<--------P                     ------->GAMYB                                 <------ZmHOX2a(2) <---------ICU4                       <-----------------AGL1                         --------->ARR14(2) ---->ARR14(2)   ----------->GT1     <-----------GT1                                 <---------ARR14(2) >LBD16<---------MYB46(3)            --------->MYB52(1)                          <---------LBD16 -----ARR14(2)--------->CCA1(2) <-----------TBP <---------ARR14(2)       --------->TOE2(3)     <----- ---ETT(2) <------MYB83  --------->MYB52(1) <---------LBD16  ------>ZmHOX2a(2)  --------->MYB52(1)   tactcatttcggttggatatggtaaaataccggtttatataaccgaaccggaaacacatttgatccgttcaaatcccttaaaaaccggatcgtattttta  1958400            <---------WOX13(1)                                         <---------AHL20(2)          --------->ATHB12                                             --------->AHL20(2)          --------->ATHB51                                          --------->YAB1--------->ANAC58         <---------YAB1                                           --------->AHL20(2)       --------->ANAC55(2)                                        --------->AHL20(1)       <---------ANAC55(2)--------->AHL20(1)                     --------->YAB1<---------At4g35610  --------->YAB1          --------->AHL20(2)               ----------->GT1     --------->ZAT2 <---------YAB1          --------->YAB1                   ----------->GT1     ------->TEIL          < --->AHL20(2)        --------->AHL20(2)                 ---------->DOF2--------->YAB1 <---------CCA1(2) ----AHL20(2)        <---------AHL20(2)   <---------AHL20(2)   --------->AHL20(2) --------->ANAC58  -   aatatgatcacataattgatcatttaaaaataatacgaggctatttttttggtgttcaaaaagataaaaataataatatgaagctcgcatctctgtaagt  1958500                                                                                   --------->ZAT14                                                                                   <---------ZAT14                                                                                   --------->ZAT18                                                                         <------MYB46(1)                                                                     --------->ATHB12                                                                   <---------TOE2(3)                                                               --------->YAB1      <---------ZAT18                ---------->DOF2                              --------->AHL20(2)<-----------RAV1(1)    --------->AHL20(2)                                      --------->AHL20(2)<---------ANAC46     --    <---------AHL20(2)                                      --------->YAB1 ----------->HVH21       <-  --------->AHL20(2)             --------->YAB1          --------->YAB1  <------MYB83         -------  <---------AHL20(2)        --------->ANAC58          --------->YAB1 <------ZmHOX2a(1)  ---------->DOF2 ---------AHL20(2)          --------->ANAC58         <---------AHL20(2) <---------AtMYB61    -------- -------->AHL20(2) ----------->GT1                  --------->AHL20(2)  <---------MYB46(3)--------->DAG2   atatatatatataaaactaaaaggaaaatcacgaattatagtatcaaaaatagatttaataataaaaataaggattggtgactggtgcacaaaaggtggt  1958600                                                                       ----------->GT1                                                                   --------->ARR11(3)                                                                   --------->AHL20(1)                                                             --------->LBD16             --------->YAB1                                  ----------->GT1       --------->YAB1                   ---------->DOF2     <---------HSFB2a(2) ------->MYB46(3)                  --------->ARR11(3)       --------->HSFB2a(2) --------MYB52(2)                  <---------ARR11(3)    <---------ARR14(2) ---->GT1    <---------ICU4       --------->CCA1(1)      --------->ARR14(2)         <---------YAB1 ->ALFIN1  --------->GLK1(2)      --------->RVE1(1)<----------ID1  <---------AHL20(1)   aacaaacaaacacaatcttgactaaattctatagaaatatcccaaagaaaaaaaaaacaaatccagaaaaatattgtatattgattttgatgatgtcgat  1958700                  <----------DOF2   <---------MYB52(1)             <-----------GT1       <-------GAMYB                                   <---------ARR14(2)         <---------ARR14(2)       <---------ANAC58                                 --------->ARR14(2)         <---------ARR11(3)       <---------ANAC58                             <---------LBD16      -         --------->ARR11(3)   <---------ANAC58             ------->GAMYB       --------->LBD16    <--         --------->ARR14(2)   <---------ANAC58          ----------->RAV1(1)--------->ARR14(2)    <---    --------->ALFIN1   <<<<<<<<<GATA-1            <-----------RAV1(1)      <---------ARR14(2)  <-----   gttgatgtgcagatattactcttttatctattgcttccgttggagtttagttttgtggcaacagtctattgtatgactatctggggatttgggagtttat  1958800  Previous    Next  AGI:  At3g06430.1    Description:  EMB2750 (EMBRYO DEFECTIVE 2750). similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G53170.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74604.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70921.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 1956415    to: 1958305    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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