Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ANAC58                                                       --------->ANAC58                                                    <-------TEIL                 <---------TOE2(3)           <---------HSFB2a(2)                         --------->ATHB12                 <---------YAB1          <---------ARR14(2)                       ----------->GT1            --------->GLK1(2)            --------->ARR14(2)                 <---------AHL20(2)       ----------->ARR10        --------->GLK1(2)--------->At4g35610        <---------YAB1    <---------ANAC46           <---------GLK1(2) --------->CCA1(2)   <----------DOF2    <---------ATHB12   accatggcgaagaaattctaagattgaaacagagattctagcaaattcgagagatgcaagtcaaacgaagacttttttttaattgagtaaatcattcgaa  1956000                    --------->ANAC58                    --------->ANAC46       --------->ANAC58                    --------->ANAC58       --------->ANAC46       <---------ARR14(2)          --------->ARR14(2)       --------->ARR14(2)       --------->ANAC58      <---------GLK1(1)         --------->ANAC58      --------->GLK1(1)   <---------MYB52(2)             --------->YAB1    <------ZmHOX2a(1) --------->At5g28300  --------->ANAC58      <---------AHL20(2)              <---  <---------TOE2(3)--------->SPL7----------->GT1    <---------ATHB12                            <----   ccctaaggaaatccacaatcgcacggcaactaagacggaaacaccaagaaacaaatcaaacatgaaatttatgaaataacttacaggtattctatctgga  1956100                                                   ---------->DOF2                                             ------>ZmHOX2a(1)                                            --------->TOE1(3)        --------->YAB1                      --------->TOE2(3)       <---------ATHB12                  <---------ARR11(3)       --------->ICU4                    <---------ARR14(2)        <---------ANAC58 ------CCA1(1)                          <---------CCA1(2)          <---------ANAC58          -------- -----ARR11(3)          ------>ZmHOX2a(1)--------->ARR14(2)    <----------DOF2         ----------->GT1   tatttcgcaatgatgttgttcgactccttcaatctctcatctatatcctcaaacaaagatgaaaactttgcttcagaagcacatttcgaaggaaaaaaaa  1956200                                                                                                <----                     <---------TOE2(3)                                                          -----                    --------->MYB52(1)                ---------->DOF2                          <-----        --------->YAB1                 <------ZmHOX2a(1)     ----------->HVH21     <---------GLK1(1)      --------->GLK1(2)                =================HOX2a_HOX2a                --------->GLK1(1) ->AHL20(2)---------->DOF2   --------->MYB46(3)  ------>ZmHOX2a(2) --------->MYB46(3)   --------->ANAC46   ttccaaagaatcagaaagagattaacgaagaacaaaccagaggagaattgatccttgaaagacttgacaacaatccccattacagatttcacgacgaatg  1956300                                                                                                 ----                                                                       --------->MYB52(2)     -------         --------->GLK1(2)                                           <--------P           <---------HSFB2a(2)         --------->ARR14(2)                                          <---------MYB52(1)   --------->HSFB2a(2)         <---------ARR14(2)                                        <------MYB46(1)        <---------HSFC1(1)      <---------MYB59                         <------ZmHOX2a(1)    <------MYB83           --------->HSFC1(1)  ----------->HVH21                     <------ZmHOX2a(1)          <---------MYB46(3)<---------MYB46(3)  ------>ZmHOX2a(1)                  --------->At4g35610          --------->MYB59   <---------WOX13(1) -----ICU4                        <---------At4g35610         <---------YAB1       >>>>>>>>>ARR2<---- ---->ATHB12                      --------->At4g35610      <---------AHL20(2)     --------->ATHB12  - ----ATHB12                       <---------ZAT14         --------->AHL20(2)     <---------YAB1 -----   attcctgaccgaatcggtgtttttttgtttgcagagagcagaggaagaggatgtgttcaattttatgtttggttagttcgtttttgattgttcgagaaga  1956400                                                                                      ----------->HVH21                                                                                     <-----------HVH21                                                                                    --------->ANAC58                                                                                    --------->TGA1a                                                                                    --------->O2                                                                                    --------->bZIP60(2)                                           --------->ANAC58                         <---------TGA1a                                           --------->ANAC58                         --------->ANAC58                                        <---------REM1(2)                           --------->ANAC55(1)                                      --------->ANAC58                              --------->ANAC46    ---------->DOF2                   --------->ANAC46                             ------->TEIL   *TSS                               --------->ANAC58                           --------->ZAT18 --------->At5g28300          --------->HSFB2a(2)       ======================================bZIP_DOF ----->MYB52(1)               <---------HSFB2a(2)       <----------DOF2          <---------ZAT18 ---->ARR10                 <---------AHL20(2)------->TEIL                  <---------ANAC58 -----ARR14(2)            <-----------TBP  --------->ANAC46                 <---------ANAC46 ---------->GT1         --------->AHL20(2) --------->ANAC55(2)              <---------ANAC58 ---->ARR14(2)  ---------->DOF2  ---------->DOF2        <---------DAG2   --------->GLK1(1)      <<<<<   aacggtaaaagatgagagaaaagagattatttatagaaagacgacacgcacttatccactttttggacttgtccgatttcttgtgcacgtcacagtttat  1956500                                                 <---------At4g35610                                                 --------->At4g35610                                               <---------CCA1(2)                                           --------->ANAC58                                           --------->ANAC46                                          >>>>>>>>>>ANAC019                                          >>>>>>>>>>ANAC072                                   <---------AHL20(1)                                   --------->AHL20(1)                                         <------                       --------->PCF2     >>>>>>>>>>ANAC055             <-----------GT1     <--------               <---------ICU4     --------->AHL20(2)          <---------ATHB12           <-----------GT1 <<<<GATA-1 --------->YAB1   --------->YAB1--------->ANAC58 --------->WOX13(1)   <----------DOF2   ctatgggcctctattcataattttgggcccatcaaaatatataacacgcatagctgcaagaacaatcaagtgtattacaaactcttttattctactcttt  1956600                                                                           <---------GLK1(2)                                                                           --------->ARR11(3)                                                                           <---------ARR14(2)                                                                           --------->ARR14(2)                                                                          <---------HSFC1(2)                                                                      --------->LBD16                                                                     --------->ATERF1(2)                                                                     <---------ATERF1(2)                                                                     <---------HSFB2a(2)                                                             --------->YAB1<---------ARR11(3)                                                            <---------ATHB12  <-----------GT1                                                          --------->WOX13(1)--------->GLK1(2)                                                        --------->LBD16   --------->HSFB2a(1)                                                       --------->RAP2.6(2)<---------HSFB2a(1)                                                       --------->ANAC58   --------->HSFC1(2)                                                       --------->ANAC58  ----------->ARR10                                                --------->ANAC46     --------->HSFB2a(2)                                                --------->ANAC58    <---------LBD16                                                --------->ANAC58  ------>ZmHOX2a(1)<---------CCA1(2) ----DOF2           --------->AtLEC2       <-------TEIL--------->ANAC46<------NtERF2            ----- -------AGL15------>ZmHOX2a(2)          XXXXXXXXXXXXXXXXXXXX>MIR403--------->MYB52(1)  <----------DOF2   caagtgagacatcgatctctccttgcagagagagagagagagagattcacacacaaaccgcaatcatcctgccggaagattctccatctcttttgtagca  1956700                                                <---------ATHB12                                                <---------YAB1                                            ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                          <---------AGP1                                          <---------ARR11(3)           --------->ANAC46                                          --------->ARR11(3)           --------->ANAC58                                          --------->AGP1      <----------DOF2         ------>ZmHOX2a(2)      <------ZmHOX2a(2)           --------->ANAC58     <---------CCA1(2)            --------->ARR11(3)  <---------ZAT18                 --------->ANAC58   --------->YAB1    --------->ANAC58     --------- ------>RAV1(1)<----------DOF2    --------->ANAC46--------->WOX13(1)  --------->SPL7<---------ARR11(3)   acagtgcgatccataagcttttgcctctcttgttccaagtaatagatcttatcattcataccttctttttcatacgcctcgaccatgatctcaaacgttc  1956800                                                                                      <---------At5g28300                                                                                     <-----------GT1                                                                                  <---------GLK1(1)                                                                   <----------DOF2--------->bZIP60(1)                                                              --------->At4g35610 <---------bZIP60(1)         --------->ANAC55(2)        --------->ZAT18           <---------At4g35610 --------->GLK1(1)         --------->ANAC58           --------->ZAT14        <------ZmHOX2a(2)--------->ANAC46         --------->ANAC46           <---------ZAT14       <---------ARR11(3)--------->ANAC58         --------->ANAC58           <---------ZAT18  <-----------HVH21   <---------ZAT18--------->DEAR3(1)      --------->ARR14(2)        --------------->AtSPL8 --------->YAB1  <---------At4g35610         -- >HSFB2a(1)            ------>ZmHOX2a(1)  <----------DOF2 --------->ARR11(3)--------->ANAC58     ----   ttgaatcgcatacgcattgtctctccttcattcttatgtacactctttccatctctatcagatcatctgctttagcacacgctgatatcaccgcgttgta  1956900  Previous    Next  AGI:  At3g06420.1    Description:  ATG8H (AUTOPHAGY 8H); microtubule binding. Identical to Autophagy-related protein 8h (ATG8H) [Arabidopsis Thaliana] (GB:Q8S925;GB:Q9SQU5); similar to APG8H/ATG8I (AUTOPHAGY 8H), APG8 activating enzyme/ APG8 conjugating enzyme/ APG8-specific protease/ microtubule binding [Arabidopsis thaliana] (TAIR:AT3G15580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40186.1); contains InterPro domain Light chain 3 (LC3) (InterPro:IPR004241) Range:  from: 1954996    to: 1956403    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g06430.1    Description:  EMB2750 (EMBRYO DEFECTIVE 2750). similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G53170.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74604.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70921.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 1956415    to: 1958305    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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