Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------AHL20(1)                                                          --------->YAB1                                                          --------->AHL20(2)                                                   --------->ZAT6                                   -                                                 --------->MYB52(1)                           -------                                                 ------>MYB83--------->AHL20(1)<---------ARR11(3)   <                                                 ------>MYB46(1)             <---------YAB1   -------                                                ----------->HVH21          --------->YAB1   ---------            --------->ZAT18             <-----------HVH21 <---------AHL20(2) --------->ICU4 <--------            <---------ZAT14           --------->DAG2   --------->YAB1      <---------ICU4   <--------            --------->ZAT14          ---------->DOF2----------->GT1       --------->ICU4   <---------CCA1(2)            <---------ZAT18 ----------->RAV1(1)<---------MYB59       ------->TEIL  <---------YAB1   -   caatacagagtgactgcacaagtctgagaacaacacaaaaaaagtcagacctaacagtaataatatatatgaactcatcatgatttttatttcatatctt  1940600       ------>MYB83       --------->MYB52(1)       ------>MYB46(1)      --------->MYB55(1)     <---------MYB46(2)     <---------MYB111(1)     <---------MYB59                                                     --------->WOX13(1)    <---------ANAC55(2)                                              --------->YAB1    --------->ANAC55(2)                                             --------->ICU4 ------->HAHB4                                                   <---------DEAR3(1) -->TOE2(3)                               <---------ZAT6       ------>NtERF2--------->YAB1 ---------ICU4                     <---------AHL20(2)         <---------DEAR3(1) -->YAB1                           --------->AHL20(2)         <---------RAP2.3(3) >ARR11(3)                    --------->AHL20(1)             <---------ANAC58 -ARR11(1)                    <---------AHL20(1)             <---------ANAC58        --------->AHL20(2) -ARR11(3)--------------->AGL15   --------->AHL20(2)       --------->ALFIN1<---------ATHB12   <------ -------->YAB1               --------->AHL20(2)  <----------DOF2<------NtERF2    --------->ICU4   aataatacctaactggttttagtaaatccaaatatataaaattagagatagctttaacaaattgggggcgatgatcaatcacaaagattaaaaatagtgt  1940700                    --------->ZAT2                    <---------At4g35610                    <---------ZAT2                    --------->At4g35610                 <---------At4g35610             <---------HSFB2a(2)             --------->HSFB2a(2)      --------->GLK1(2)                    ----------->GT1        <------MYB83      <---------ARR11(3)                  ----------->GT1       --------->ALFIN1               ------      --------->ARR11(3)                  <---------ANAC46  ---------->DOF2                    ------      --------->ARR14(2)                 <---------LBD16 <----------DOF2                      <------      <-----------ARR10                 --------->ALFIN1<---------ANAC58        <-----------HVH21      <---------ARR14(2)           --------->ICU4       <---------ANAC58       --------->WOX13(1) ---     <---------GLK1(2)           --------->YAB1   --------->MYB52(1)        <-----------HVH21 ------- ---ZAT6 <----------DOF2      ----------->GT1    --------->RVE1(1)<------MYB46(1)           ---------   aactggagaatctttctcgagcagctccagcatagtaataagttggggaaaatatcgggcttgaaagtgggtcttatgggtcagtcaggcccaactatga  1940800                                                          <---------AHL20(2)                                                          --------->AHL20(1)                                                    ----------->GT1                                                    <------NtERF2                                                   --------->LBD16                                                   <---------MYB46(3)                                                  <---------ANAC58                                                  <---------ANAC58                                                  <---------ANAC46                                                 <---------LBD16                                                 <------NtERF2                                                 --------->ATERF1(1)                                               --------->ALFIN1                                               <---------DEAR3(1)                                               ----------->HVH21                         <---------HSFB2a(2) --------->O2 <---------AHL20(1)                         --------->HSFB2a(2) --------->TGA1a                     --------->KAN4(2)       --------->ZAT2   ---------->DOF2  --------->KAN4(1)        <---------O2 --------->AHL20(2) --->YAB1           <---------KAN4(1)        <---------TGA1a --->ATHB12         --------->HSFC1(2)       <---------At4g35610            --------->SPL7    <------ ---YAB1            <---------HSFC1(2)       ===============================================bZIP_DOF ------>AHL20(2)    <---------HSFB2a(1)      <---------ZAT2                <---------MYB52(1)<------- -->ICU4            --------->HSFB2a(1)      --------->At4g35610  <---------ICU4          ----------- >YAB1             <---------KAN4(2)       <-----------RAV1(2)<-----------GT1    ---------->DOF2   ttaaacaaagcccaaatcgcgaatgttccaaaacaactctcttgctcaggtggcgggtaattaattactaattccccgttcgatgaagcgactagttaca  1940900                                          <---------LBD16                                          ----------->RAV1(2)                  --------->At4g35610   <---------At5g28300                  <---------At4g35610  <-----------GT1                               <---------DAG2            <---------AHL20(2)--------->At5g28300             ------------>CBF    <-----------GT1 *TSS -TEIL <---------AHL20(1)    ----------->GT1            <---------MYB46(3) ---------->DOF2       ---- ----GT1<---------AHL20(2)------------>AtMYB77  <---------HSFC1(2)     ------->TEIL  <----------DOF2< >GT1  <---------ARR11(3) --------->MYB52(1)    --------->HSFC1(2)    <---------CCA1(2)          <---   tcgtagccatatatttattcagcttaatcaacggttacaaattaccctgaagcttcggtcgttttgcaatttgtatctaaagtttcactttttttttaaa  1941000                                                                   <---------AtLEC2                                                               <---------ANAC58                                                               <---------ANAC58                                                              <---------At4g35610                                                              --------->HSFC1(2)                                                              --------->ZAT2                               --------->TOE1(2)              --------->At4g35610                              --------->HSFC1(2)              --------->HSFB2a(1)                              --------->HSFB2a(1)            <---------TOE1(2)                              <---------HSFC1(2)          <---------ANAC46                              <---------HSFB2a(1)         <---------ANAC58          <----------DOF2    ------->TEIL                 <---------ANAC58       <-----------GT1       <---------ARR14(2)       <---------ARR14(2)<---------ANAC58 ----->ARR11(3)              --------->ARR14(2)       --------->ARR14(2)<---------ANAC58         <--- ----------DOF2    --------->ANAC58            ---------->DOF2<---------HSFC1(2)    <---------GLK1(1) ------ARR11(3)    --------->ANAC58   ------>ZmHOX2a(2)--------->GLK1(1)<---------ANAC46 <---------At4g35610   atctttattttactttctcacaagcgaagcgaaccctcgatctcaaggcgaaagcagatttcgtagcttccatggcgagaaattcgaattccgatgaggc  1941100                                                                   <-------GAMYB             --------                                                                  <-----------RAV1(1) <------NtERF2                  ---------->DOF2                                 <---------MYB46(3)  --------->ATERF1(1)          <------ZmHOX2a(1)                                       =========================RAV       --------->At4g35610     --------->YAB1            --------->At4g35610          --------->DEAR3(2)       <---------At4g35610   <---------TOE1(3)           --------->ZAT2<---------ANAC46 ------>NtERF2   <-----------HVH21         <---------TOE2(3)       --------->ALFIN1  <---------ANAC58----------->HVH21   <-----------TGA1      <-------GAMYB   >>>>>>>>>TBF1 <------ZmHOX2a(1)       ----------->RAV1(2) -------DOF2 <------ZmHOX2a(1) <------ZmHOX2a(1)    <------ZmHOX2a(1)  <---------ANAC58--------->DEAR3(1)   tttctcgtcagaggaggaagaagagcgggttaaggataatgaagaagaagatgaggaggagctcgaggctgttgctcgttcttctggctccgacgatgac  1941200             <------NtERF2            ------>NtERF2           ----------->HVH21           --------->At1g77200           --------->DREB2C(2)           --------->DEAR3(1)           --------->RAP2.3(3)          <------NtERF2          --------->ATERF1(1)          --------->DEAR3(2)          --------->ORA47(2)          --------->RRTF1(1)          --------->RAP2.3(1)          --------->ERF1         <---------At4g35610         ------>NtERF2         --------->ABI4(1)         --------->At4g35610        --------->RAP2.6(2)        --------->ATERF1(2)        <---------ATERF1(2)        --------->RAP2.3(2)        --------->RAP2.3(3)        --------->DEAR3(1)        <---------DEAR3(1)        --------->RRTF1(3)        --------->RRTF1(2)       --------->RAP2.3(1)       --------->ORA47(2)       --------->ATERF1(1)       <------NtERF2       --------->RAP2.6(1)       --------->RRTF1(1)       --------->ERF1       --------->DEAR4(2)      --------->At4g35610      <---------RAP2.3(1)      <---------DEAR4(2)      --------->DREB2C(1)      <---------ATERF1(1)      ------>NtERF2<-----------GT1      <---------DREB2C(1)                                                  --------->ANAC58     --------->RAP2.6(2)                                             --------->At4g35610     --------->DEAR3(1)                                              <---------ZAT2     <---------DEAR3(1)                                  --------->ATHB12  --------->ANAC58     <---------ATERF1(2)                                 <---------ICU4  <-----------RAV1(2)     --------->ANAC46                     --------->ZAT2<---------YAB1  --------->At4g35610    --------->MYB46(3)                    <---------ZAT2--------->ICU4  --------->ZAT2    --------->ATERF1(1)                   --------->At4g35610        <---------At4g35610    --------->ERF1--------->MYB46(3)      --------->ATERF1(1)        --------->ZAT2    --------->DEAR3(2)                    <---------At4g35610 <---------TOE1(1)    --------->RAP2.3(1)                  <---------ATERF1(1)  <---------TOE2(1)   <---------ATERF1(1)        ------>NtERF2         <---------------------WRI1      <---------ANAC58   --------->At4g35610       --------->DEAR3(1) --------->LBD16     --------->MYB111(2)  <---------YAB1 --->TGA1<---------ATERF1(1) ----------->HVH21 <---------ANAC46    <--------P       <---------ANAC58   gaagtagccgccgccgacgaatcaccagtctccgacggagaggctgctcccgtagaagatgattacgaggtagctgcaggctaatttcgttttgatggct  1941300                        ------->TEIL                                       <---------ANAC58                   <---------At4g35610                                  <---------DEAR3(1)                   --------->At4g35610                               <---------ARR14(2)            --                 --------->ZAT18                                     --------->ARR14(2)          <---                 <---------ZAT18                                     --------->ARR11(1)        ------                 --------->ZAT14                                     <---------GLK1(2)         <-----        <---------GLK1(1)  <----------DOF2                <---------AHL20(2)<---------SPL7<---------TOE1(2) <---------YAB1  <---------ZAT14         ---------->DOF2 --------->AHL20(2)<---------ANAC58  <-------   gtgatttttgaaatctcagtgaactgcatcttttttgtacttggaaagttgaaatttcatttaatgcaatggattcggcgttcgcgtcttccttcgtttg  1941400                                                       <---------------AGL15                                                      <-----------------AGL1                  -------                               --------->ATHB12      <------NtERF2                          --------- ------->MYB52(2)             <-------TEIL          <---------MYB46(3)                     ---------- ------MYB52(1)          ---------->DOF2      <---------AtLEC2                           <XXXXXXXXXXX --->MYB52(2)        <---------ANAC46      <---------LBD16                              <------ZmHOX2a(1) ----MYB46(3)        <---------ANAC58      <---------At4g35610                         <----------ID1 --MYB52(1)          <---------ANAC58    <---------RAP2.3(3)             <------ZmHOX2a(1) ==========   ttagttttagtcgaatttttgttgagtgaaagttcattgaatgtctgcgcatggtggctcattgtggtataagcaggacgaagaagatgaggaaaaagct  1941500  Previous    Next  AGI:  At3g06400.1    Description:  CHR11 (CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase. Identical to Putative chromatin-remodeling complex ATPase chain [Arabidopsis Thaliana] (GB:Q8RWY3;GB:Q9SQU3); similar to CHR17 (CHROMATIN REMODELING FACTOR17), DNA-dependent ATPase [Arabidopsis thaliana] (TAIR:AT5G18620.1); similar to CHR17 (CHROMATIN REMODELING FACTOR17), DNA-dependent ATPase [Arabidopsis thaliana] (TAIR:AT5G18620.2); similar to Putative SWI/SNF related, matrix associated, actin dependent regulator of chromatin [Oryza sativa] (GB:AAK53826.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71013.1); similar to hypothetical protein OsJ_016382 [Oryza sa Range:  from: 1940998    to: 1946930    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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