Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               ------>NtERF2                              --------->AHL20(2)                                             --------->LBD16                         --------->YAB1                                            --------->DEAR3(1)                      --------->ICU4                                          <---------ATERF1(1)           <---------------AGL15                                          ------>NtERF2                 ------>ZmHOX2a(1)                                         --------->RAP2.3(2)            --------------->AGL15                                         --------->RAP2.6(2)           ----------------->AG                                         --------->DEAR3(1)            <-----------------AGL2                                        --------->MYB46(3)             ----------------->AGL3                                        --------->ATERF1(1)            --------->TOE2(3)<---------AHL20(2)                                        --------->ERF1                 <---------------AGL15 <---------WOX13(1)                    <---------At4g35610             <-----------------AGL3 ------->ATHB12                        --------->At4g35610            ----------------->AGL1 -------YAB1                       <----------DOF2                    ----------------->AG ---GLK1(1)                 <-----------GT1<------NtERF2   <---------ATHB12    ----------->GT1   ctgattgaattagtatctaaaattgtatagtttccttctttagccgccgagaaaaattcaaatcactaaaattcctaaataggggaataataaaacattc  1933700              --------->LBD16             --------->ANAC58                                  <--------             --------->HSFC1(1)           --------->ANAC58                         ----------->GT1             --------->HSFB2a(2)   <---------HSFB2a(1)                             <---------ANAC55(2)             <---------HSFC1(1)    --------->HSFB2a(1)                             --------->ANAC55(2)             <-----------RAV1(2)   --------->HSFC1(2)                        <------ZmHOX2a(1)   ----             <---------HSFB2a(2)   <---------HSFC1(2)                       ----------->GT1<---------      <---------ICU4          --------->LBD16                             <-----------RAV1(2) -------   --------->YAB1            <---------LBD16           --------->KAN4(2)<-----------HVH21<---------AHL20(2) <---------ARR11(3)   --------->YAB1      --------->ANAC46  <----------DOF2>>>>>>>GRF7   --------->AHL20(2)   caaaatcataatgttccagaagaatcaaaaccctggaaaattccaagaaaatttgaaaattcctttagagtttgtgtcaggaaacatgtaatttatcaat  1933800                                             <------ZmHOX2a(2)                                            <---------ARR14(2)                                            <---------AGP1                                            --------->ARR14(2)                        --------->At4g35610 <---------ARR11(3)                      <-----------GT1       --------->ARR11(3)                    <-----------GT1        <------ZmHOX2a(1)     --------->ANAC46                   <-----------GT1 ----------->GT1  <---------AHL20(2) -YAB1            <---------AHL20(2)   ---------->DOF2        --------->MYB46(3) ----->YAB1--------->At4g35610    --------->ZAT6    --------->AHL20(2)                       -------- --GT1    <---------ARR11(3)  --------->AtLEC2------>ZmHOX2a(2)----------->RAV1(1)          --------- -->WOX13(1)      --------->AHL20(2)--------->At5g28300---------->DOF2         <---------TOE2(3)   cttcatcaacaagagctcaatttatcacctccatgaacagtaaaaggatctaaattaaaaagcatccacagaaatgtttttaagaaaaaatcgataaagc  1933900                                           <------ZmHOX2a(2)                                          <---------ARR11(3)                                   <-------TEIL  --------->ATHB12                                  --------->GLK1(2)        <------MYB83                           <--                                  --------->CCA1(2)        <------MYB46(1)            <-------GAMYB                                 --------->ARR14(2)       <---------AtMYB61          <-----------RAV1(1)                               ----------->ARR10<---------ATHB12                  <---------ARR14(2)                    <------NtERF2<---------GLK1(2)        --------->MYB59         --------->ARR14(2)- ->DAG2      ----------->RAV1(2) <---------ARR14(2)     <---------MYB52(1)   <-----------GT1      --- ->DOF2    <-----------GT1----------->TGA1--------->ARR11(3)                ----------->HVH21--------   attcaaacacatattacctggcagagttatgacgagattcgaaagatcgaatgattcagtttggtcgtagagagggatgtaacagttctgttgaagggac  1934000                                                           <---------AHL20(2)                                                         <---------RVE1(1)                                                         <---------CCA1(1)                                               <---------AHL20(2)                                               --------->AHL20(2)                                <---                                     ----------->GT1---------->DOF2                             -----      <-----------------------TaNAC69(2)   --------->AHL20(2)           --------->ANAC58        <----     --------->CCA1(2)               <---------ANAC58   <---------GLK1(2)      *TSS            <----- -------At4g35610                    <---------ANAC58   <---------ARR11(3)   --------->O2      <----- --------->DOF2                      <---------ANAC46   --------->ARR11(3)   <---------O2      <----- ------>At4g35610        --------->RAP2.6(2)<---------AHL20(1)          --------->ANAC58      ------- --->HVH21<------ZmHOX2a(2)  ---------->DOF2--------->AHL20(1)        ---------->DOF2        <-------   agcaaagagacgatcgaagacgagagaccgccaaagatggcgtaaatatataaataaagattttttttgcagagaagccaagtggaatagagagaggtca  1934100     --------->AHL20(2)  <----------DOF2 ------At4g35610                                                  <---------AHL20(2) ---->MYB52(1)                                                    --------->AHL20(2) -----DOF5.7(2)                                                  <---------ATHB12 ----WRKY12                                                  ------------>CBF                  <----- ----WRKY38(1)                                         <---------DAG2                         <------ ----WRKY45                                         --------->ARR11(3)                  <-----------GT1 -->WRKY18(1)                                       <---------ARR11(3)           --------->ARR11(3) ----HVH21                              <-----------GT1<----------DOF2       <---------At4g35610   acggcttttaaatctcatattagctaatctccatcgtctatttatccatctcaagaactttattccaattaaacggttgagatgattttgttacaccgtt  1934200      --------->At5g28300         <-----------RAV1(1)                         --------->ANAC58    ----------------->AGL1      --------->YAB1                                --------->ANAC46    <-----------------AGL1     <---------YAB1                                 --------->ANAC58 <---------YAB1       --------->ATHB12  <---------ANAC46                    <---------ALFIN1 ----------->HVH21 <---------At4g35610  <---------ANAC58           ------->GAMYB <----------DOF2 ----MYB52(1)      --------->At4g35610  <---------ANAC58        ----------->RAV1(1) -GAMYB<---------MYB52(1) <---------MYB46(3)  ---------->DOF2   --------->MYB52(1)      <<<<<<<<<<GT-3b   gttatgaccgtaagtggaattagctcattggttatcatgttgtcgtgtaaaaggagtatcaaaaaacaacagaggggaacacgcttttatttttcttatg  1934300                            <----------DOF2                          ==============================================================MADS_MADS                          <---------------AGL15                          --------------->AGL15                      --------->KAN4(2)                     --------->KAN4(1)                     <---------KAN4(1)                    <---------YAB1                    <---------KAN4(2)                  <------ZmHOX2a(1)                                                        <---------ANAC55(2)                 <---------YAB1                                                    <------NtERF2                <---------TOE2(2)                                       --------------->AGL15                <---------TOE2(3)                             <-----------GT1     ------>NtERF2             ------>ZmHOX2a(2)                   --------->YAB1         <----------DOF2    --------->ANAC55(2)           <---------ARR11(3)                    --------->AHL20(2)     <---------------AGL15           --------->ARR11(3)      <------ZmHOX2a(1)<---------AHL20(1) <-----------------AGL3 ------>MYB83=============================HOX2a_HOX2a<-----------GT1   <-----------------AGL1 ------>MYB46(1)<---------TOE1(2)<---------TOE2(3)  --------->ARR11(3) <-----------------AGL2  ------   accaaatgtaaatgatcttaggattattctctttttaggaataaaactgaataatatactgtttgtactgtattctttttatggcaccgtattacataat  1934400                                        --------->YAB1                                --------->YAB1                                      <---------WOX13(1)                             <---------YAB1                                 <----------DOF2                                    <---------AHL20(2)                            --------->ANAC55(2)                                     <---------AHL20(1)                            <---------ANAC55(2)                                     --------->AHL20(2)                            <---------ANAC46                                        --------->AHL20(1)                            <---------ANAC58                                       --------->AHL20(2)                            <---------ANAC58                              <---------AHL20(2)                           <-----------------------TaNAC69(2)             --------->AHL20(2)  <------                          <-----------GT1                             --------->AHL20(2)    ---------             --------->MYB52(1)------->TEIL                          --------->AHL20(1) <---------AHL20(2)           ------>ZmHOX2a(1)<---------ANAC55(1)            ----------->HVH21       --------->YAB1<---          --------->TOE2(3)--------------->AtSPL8   --------->YAB1   <---------ARR11(3) --------->AHL20(2) ---->DOF2--------->TOE1(3)--------------->AtSPL3  <-------TEIL      <---------AHL20(1)<---------AHL20(2)   agccaaatacttccttaacagaactaaattacgtactttgaatgataaccagtttcataaactgaccccaaaatatttatttgaattatattaattgtga  1934500                                              <---------AHL20(2)                 --------->ANAC58                                             <---------AHL20(2)                  --------->ANAC58                                             --------->AHL20(2)                  --------->ANAC46             <----------DOF2              <---------ICU4                        --------->LBD16       <--------P                        --------->ICU4             --------->YAB1 <---------GLK1(2)     <---------MYB46(3)                  <---------YAB1            <---------AHL20(2) --------->ALFIN1                   <---------ANAC58              <---------AHL20(2)--------->GLK1(2) ---YAB1<---------MYB46(3)          --------->ANAC55(2)           --------->AHL20(2)------->TEIL   <- >YAB1<-------GAMYB                 <---------ANAC58     <------MYB83   <---------TOE2(3)          -- ------WOX13(1)                 --------->DOF5.7(2)      <------MYB46(1)<---------TOE1(3) --------->At4g35610   tagatgggggttgttctttcttatgtcattcgacgtttacttgataattaaatataagttggtcattttttaataaggtttccacgaatctctgatgaaa  1934600  Previous    Next  AGI:  At3g06370.1    Description:  NHX4 (sodium proton exchanger 4); sodium:hydrogen antiporter. Identical to Sodium/hydrogen exchanger 3 (NHX3) [Arabidopsis Thaliana] (GB:Q84WG1;GB:Q9SQU0); similar to NHX2 (sodium proton exchanger 2), sodium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT3G05030.1); similar to Na H-antiportor [Nierembergia caerulea] (GB:BAB56106.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61480.1); similar to Na H-antiportor [Petunia x hybrida] (GB:BAB56105.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153); contains InterPro domain Sodium/hydrogen exchanger subfamily; (InterPro:IPR004709) Range:  from: 1930402    to: 1934079    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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