Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------TOE1(3)        --------->TOE2(3)        <---------MYB59                                                                <----------DOF2        --------->TOE1(3)                                                             --------->TOE2(3)      ------->TEIL                            <----------DOF2                    <---------At4g35610 -------TEIL     <---------TOE2(3)      <----------DOF2                          --------->At4g35610 ---->DAG2      ---------->DOF2 ---------->DOF2   <----------DOF2          --------->DAG2           < ---->DOF2     <---------AHL20(2)       <---------DAG2    <----------DOF2---------->DOF2 --------->AHL20(2)   agttcatcaacctaaatttaaagttttttttttcaaaagtagctttttctttctttctcactttcaagtattttggaaaggtgagcttcctttaaatttc  1916800                                                                               <---------ANAC58             <------MYB46(1)                                                   --------->ANAC55(2)             ----------->GT1                         ----------->GT1           <---------ANAC55(2)             <------MYB83                          ---------->DOF2             <---------ANAC58    --           <---------ANAC46             --------->AHL20(2)               --------->AHL20(2)       <--         <---------MYB46(3)          --------->ANAC55(2)                 <---------AHL20(2)     -----      <-----------RAV1(1)            <---------ANAC55(2)            <---------AHL20(2)         ------ ----------DOF2      <---------------AGL15   ----------->GT1     ----------->GT1         --------->MYB52(1)   ttctttttttgttgttggtaaaactatacatagaaaatcacataatatagttagaaagaaaaaacagtagttaatttaaatgcgtaagaagtaagggata  1916900                      <------NtERF2                     ------>NtERF2                    <---------bZIP60(1)                    <---------ATERF1(2)                    --------->ATERF1(2)                    --------->bZIP60(1)                    <---------ANAC46                   --------->RAP2.6(3)                  --------->MYB52(1)                 ----------->TGA1          --------->LBD16                                  --------->TOE2(3)          --------->HSFB2a(2)                             <---------ANAC46          ------>ZmHOX2a(1)                          --------->ANAC55(1)        <---------ANAC46                             --------->ANAC55(2)             <---------YAB1 ------->YAB1    ----------->HVH21         --------->ARR14(2)                      --------->YAB1   - -------YAB1 ---------->DOF2               <---------ARR14(2)       <---------YAB1 <---------ICU4  -- ---->YAB1<---------HSFB2a(2)   --------->ANAC58     --------->ANAC46             <---------ATHB12 -- --->ICU4<---------LBD16        --------->ANAC58     <---------ANAC55(2) <-----------TGA1        ----   atgatatgtttcctggaaagtgacggcaatcgacaagaacatgagggtctgaaactcgtaacgttgaattttcatcgtcatcaaatcatcatcgaaaatc  1917000                                                                                   --------->AHL20(2)                                                                        <-----------ARR10                                                                       <---------GLK1(2)          <---------YAB1                                           ---------->DOF2 <---------AHL20(2)       --------->GLK1(2)                                   ----------->GT1      --------->YAB1 ------>GAMYB                       <---------AHL20(2)  --------->MYB52(1)    <---------YAB1 ------->MYB46(3)             ---------->ID1          --------->ARR11(3)--------->GLK1(2) ------->ANAC46           <----------DOF2       <---------ICU4    <---------AHL20(2) ----->MYB52(1)       <-----------GT1          --------->ICU4     --------->AHL20(2)               --   aacgacaagaatatgattcgtatttttcctttgtcgattttttttgttaattagtagataatggaaaattaaagaatcttattaataaatgaagacagaa  1917100                                                 <---------ICU4                                                 -------->ATHB1                                                 -------->HAHB4                                                 --------->ATHB12                                                 <---------AHL20(2)                                                 --------->ATHB51                                                <---------ATHB51                                                <---------YAB1                                             <---------AHL20(2)                                    >>                                             --------->AHL20(2)                                    >>                      <---------ZAT6        --------->AHL20(2)                                     >>             ---------->DOF2            ------->TEIL                                 <------------CBF            <---------AHL20(2)       <---------ANAC55(2)                           <---------YAB1  >>            --------->AHL20(2)    --------->TOE2(2)                      ----------->GT1           <-         --------->YAB1        ----------->RAV1(1)<------------CBF      --------->DAG2             --      ----------->GT1 ----------->GT1--------->ANAC55(2)               ---------->DOF2  <-----------HVH21 -------->DOF2      <---------ZAT14 <-------TEIL--------->ICU4----------->GT1------------>CBF <------   gtaaagaccagtaataaaagagtagagtgacaacaacatacgtatatttaattattgatataagtggataaaaaaaagtaacaatgtcattgtcagtcgt  1917200             <---------AHL20(2)            <---------AHL20(2)            --------->AHL20(2)    --------->At4g35610    <---------At4g35610 >>>>>>>GATA-3 >>>>>>>GATA-4 >>>>>>>GATA-2             --------->AtMYB61                                                  <------ >>>>>>>GATA-1 <---------TOE2(3)                                                        --------->ETT(2) --------ARR14(2)       --------->ANAC46                                       <---------GLK1(2) ------->ARR14(2)  ------->TEIL               *TSS                          --------->YAB1  <-------- ---ANAC46  --------->AHL20(1)           <---------ICU4            <----------DOF2      <---------ETT(2)   ggattcagcttaaatttaatgaatataaaccacaactatttcttcattactagatttatagatttgattctttctctctcagaatttttgtcgaccgaat  1917300                                                                 --------->MYB52(1)                                                                --------->ARR14(2)                                                         <------NtERF2                                                         --------->ZAT2                                                         --------->At4g35610                                                   <-------TEIL <---------ARR14(2)                                                  --------->GLK1(2)                                <--------P        --------->ARR14(1)                              ----------->GT1     --------->CCA1(2)                         ---------                          --------->GLK1(2)      <---------GLK1(2)<---------LBD16          <---------ARR14(2)                        <---------AHL20(2)       <---------ARR14(2)                        <---------GLK1(2)                     <---------AHL20(2)          --------->ARR14(2)                       --------->HSFB2a(1)                    <---------AHL20(2)           --------->ARR11(1) --------->LBD16       <---------HSFB2a(1)    <-------TEIL    --------->AHL20(2)      <-------TEIL <---------At4g35610        --------->TOE1(2) ---GLK1(2)     --------->AHL20(2) <---------At4g35610   <---------ZAT2         --------->YAB1     << -MYB59         <---------AHL20(2) --------->At4g35610<---------At4g35610      <---------YAB1   <<<<<   ttcatattcatatatagttttattaaataatctggttagatgaagatgcaagattcggcagctcaagaaccggaaattgctataatcgtgggagattctt  1917400                                                                                            <-------GAMYB                                                                                           <---------MYB46(3)                                                                                           --------->MYB55(2)                                                                                           --------->MYB111(2)                                                                                          <--------P                                                                                      --------->LBD16                                      --------->ARR11(3)                             <---------LBD16                                    <-------TEIL                                     <---------ANAC46  <<<<<<<<<TBF1             <-------TEIL                <----------DOF2        <---------DAG2 >GLK1(2)               <---------TOE1(2)              <---------DAG2          <----------DOF2   <--- <<<<<<<TBF1           <-----------RAV1(2)      --------->GLK1(2)      ------>ZmHOX2a(1) <-------GAMYB <<<<TBF1        <<<<<<<<<TBF1  <-------TEIL   <---------GLK1(2)  ---------->ID1    <---------LBD16   cttcttcttctcttcattcttcttctcaggtacatacatacatcttccaaattctgacctttttttttgtctcctaattcgctttttccggggttgttga  1917500                       <---------ICU4             <----------DOF2                     <---------ARR11(3) <-------MYC3                     --------->ARR11(3) ------->MYC2          --------->YAB1              <---------ARR14(2)--------->TOE2(3)------>ZmHOX2a(2)            >>>>>>>>>GT-1      --------->ATHB12--------->ARR11(3)          --------->At5g28300  <---------ICU4  <---------ARR11(3)                ------->TEIL   -----         ----------->GT1<----------DOF2 ------->MYC3    <---------AHL20(2)       <---------ARR14(2) ------WOX13(1)     --------->GLK1(1)   <-------MYC2    <---------YAB1           --------->ARR14(2)   tagattatacaaggtaaatctgaaatctttacatcattagcatgtgtctgatctttatattatagcataatctctataaaacgtatatggggtttctctt  1917600                                             <---------TOE1(3)       --------->TOE2(2)                                             <---------TOE2(3)      <---------ANAC58          -------                                     <---------WOX13(1)             <---------ANAC58         <-------                                   --------->ATHB12               <-----------GT1   ----------->GT1 - ------>GT1                       <---------YAB1        <---------YAB1        --------->GLK1(2) <----   gttaatttctcagttttttttgtttctctcttctgtctgattgatataaggtttgattatccatgaaattacctgtgaaaattctagggtttatattgat  1917700  Previous    Next  AGI:  At3g06330.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G18760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71039.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain Zinc finger, variant RING-type; (InterPro:IPR011016) Range:  from: 1917246    to: 1919931    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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