Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <-------GAMYB                                            --------->MYB55(2)                                            <---------MYB46(3)                                           --------->ALFIN1                                           <---------AtMYB61                                          <---------MYB52(1)            --------->ARR14(2)                                        <---------DEAR3(1)              <---------ARR14(2)                                        <---------DREB2C(2)        --------->ANAC58                ---------->DOF2        <------NtERF2               --------->AtLEC2             --------->AtLEC2         ------>NtERF2                --------->ANAC58             ------>ZmHOX2a(1)       --------->ANAC58              --------->ANAC46    <---------ANAC46      <---------GLK1(2)              <---------DEAR3(1)     <---------ICU4  ----------->RAV1(1)   ---  ---------->DOF2                    --------->ANAC58     ------->TEIL --------->GLK1(1)       ------   gtccaaaagattgtcctgcaaaggctgaatggttttgagacgccggtggttgaattgatgaatcactacaagcaaatccaacattcgcagtgtgtaagaa  1906900                                                  <---------GLK1(2)                                                 --------->HSFB2a(1)                                                 <---------HSFC1(2)                                                 --------->ZAT2        ----------->GT1                          <---------ZAT2       <---------------AtSPL8         --------->ANAC58          --------->At4g35610       --------------->AtSPL3         --------->ANAC58     <---------TOE2(3)       --------------->AtSPL8       ---------->DOF2      ------>ZmHOX2a(1)       --------->DAG2          ---------->DOF2   --------->HSFC1(2)     ---------->DOF2        --------->ANAC58     <---------At4g35610 ---------->DOF2            --------->ANAC58     --------->At4g35610    --------->ANAC58 ------>AHL20(2)           --------->DAG2       <---------TOE1(2)       --------->ANAC58 --->YAB1  <-------TEIL   ---------->DOF2    --------->ANAC46<------ZmHOX2a(1)   taaaaaagaaaggtacaatctaagaacaaaaagcaaagtaaagcaactcgcagcttctcctaaggaagatgaagaagcaaaacccgactgcctaagtgat  1907000                          <---------ARR11(3)      ------>ZmHOX2a(1)                          --------->ARR14(2)     --------->TOE2(3)                          <---------GLK1(2)     ------>ZmHOX2a(2)           --------->YAB1 --------->ARR11(3)  <---------ARR11(3)                        <-----------GT1          <---------YAB1  <---------ARR14(2)  --------->ARR11(3)                       ----------->HVH21         <---------ARR11(3)                 <---------YAB1                  <---------ARR14(2)         --------->ARR11(3)               --------->YAB1 <----------DOF2    --------->ARR14(2)     --   atagaacacaatatcatagaaaattcaagatacttctctcattctcatgatcctaaacactttaatacaacgatagcatatatgtaaatttgacagttca  1907100                           ----------->GT1                           <---------ANAC46              --------->YAB1                    --------->TOE2(3)             <---------YAB1<---------ANAC58   <---------ARR11(3)   --------->RVE1(1)       <---------ANAC58   --------->ARR11(3)  --------->GLK1(2)  <-------TEIL            --------->RVE1(1)  --------->ARR11(3)============================HOX2a_HOX2a  <---------ARR11(3)<------ZmHOX2a(2)    ------>ZmHOX2a(1) --------->CCA1(1) <---------ARR11(3)   --------->TOE2(3) --------->RVE1(1) --------->AGP1      ----------->GT1                               <-------TEIL ------->AHL20(2)  --------->ARR11(3)------->TEIL              ---------->DOF2      --------->CCA1(2)   aaaaaatctctgagtataatagatccatagcgtgaaatgaatcctaaaaatctcaaaactcgaagaaaagtccgattgaagcatagatacatctatagag  1907200                                               <---------ATERF1(1)                                 --------->SPL7--------->ABI4(2)                                ------>MYB83   <---------At4g35610                                --------->MYB52(1)        <---------At4g35610                                ------>MYB46(1)------>NtERF2                               --------->MYB55(1)    --------------------->WRI1                               <---------SPL7  --------->At4g35610                            -------                              <---------MYB52(2)    <---------ANAC58                          -------                              <---------MYB55(2)    <---------ANAC46            <---------HSFB2a(2)                              --------->MYB46(3)    <---------ANAC58            --------->HSFB2a(2)                              <---------MYB46(2)<------NtERF2                ------>ZmHOX2a(1)-------                <---------MYB46(3) ----------->GT1------>NtERF2 --------->TOE2(1)--------->LBD16       --------->ZAT18        --------->DEAR3(1)--------->ATERF1(1)  <---------MYB59        ---------     --------->ZAT14         --------->ANAC58 <---------DEAR3(1)--------->TOE1(1)--------->ANAC46     <---------ZAT18         --------->ANAC58--------->ZAT18   <---------At4g35610  --------->SPL7     --------->ZAT18      <---------ABI4(2)--------->ANAC46    --------->At4g35610 ---------->DOF2   aatgaagagcacacctagtggttgaagaagcaccgaacggtgtaaacggcgctggcttagagctcatcggacctaagtccttcccgaaaggcctaaacgc  1907300                                                                                  ---------->DOF2                                                                               <------NtERF2                                                                              --------->LBD16                                                                              ------>NtERF2                                                                             <---------ATERF1(2)                                                                             --------->DEAR3(1)                                                                             <---------DEAR3(1)                                                                             --------->ATERF1(2)                                                                            --------->DEAR4(2)                                                                            <---------LBD16                                                                            <------NtERF2                                                                            --------->ATERF1(1)                                                                            --------->RAP2.3(1)                                                                           <---------ATERF1(1)                                                                          <---------DEAR3(1)                                                                          --------->DEAR3(1)                                                                        <-----------HVH21                                                                       <---------ANAC58                                                                       <---------ANAC58                          <---------ICU4                               <---------bZIP60(1)                         <---------YAB1                                --------->bZIP60(1)                  <---------WRKY18(1)                                  --------->ANAC55(2)                  >>>>>>>>>WRKY18                                      <---------ANAC55(2)               <---------ANAC58                                        --------->ANAC46               <---------ANAC58                                        <---------bZIP60(2)           --------->KAN4(2)                                     <---------AHL20(2) -->ANAC58--------->HSFB2a(1)                                    --------->AHL20(2)         <-------- -->ANAC58<---------HSFB2a(1)                             --------->TOE2(2)<---------RAP2.3(1)------- -->ANAC46--------->HSFC1(2)     ------>NtERF2            --------->TOE2(3)------>NtERF2  --------->ARR14(2) ->DOF2   <---------HSFC1(2)  <---------At4g35610   ------>ZmHOX2a(1)<-----------GT1      <---------ARR14(2)   cattctctgagaaaattccttgacttgattatcgctgcctctcttctaattctccttcaaccttcgtttaattacgtcgccggctaaagtcgaaaccgga  1907400                                   --------->SPL7                                  <---------SPL1(1)                                  <---------MYB52(1)                                 <---------SPL7                                 <-----------HVH21                                <---------ANAC58                                <---------ANAC58                              <------------------SPL14                             ------------------>SPL14                       --------->bZIP60(1)                           <---------O2                       --------->ANAC58                              --------->bZIP60(1)                       --------->ANAC58                          ------>MYB83                       <---------bZIP60(1)                       ------>MYB46(1)                      --------->ATERF1(1)            <---------ANAC46<---------bZIP60(1)                     <---------TGA2(2)             <-----------GT1 ------->GAMYB                     <---------ATERF1(1)        <---------YAB1  --------->MYB52(1)           <-------                    ----------->TGA1<---------DEAR3(1)         --------->TOE1(2)            <-------- <------------CBF   ----------->HVH21      <------ZmHOX2a(1)   --------->TOE2(2)          <---------AHL20(2) -LBD16           <---------At4g35610  <---------ANAC46       --------->MYB46(3)         --------->AHL20(2) -->LBD16<-----------GT1------>NtERF2--------->LBD16<---------TOE2(3)--------->O2    --------->LBD16   gcaaattgaattttctgttctggtgacgcctcttccgtccggcgaggattattttacgtttaaaaccaacgacgtcgtttttatttccgaattttatgtt  1907500                                                                          --------->ZAT18                                                                          <---------ZAT18                                                                        --------->TOE1(2)                                                    <------------CBF    <-------PIF5                                                   --------->YAB1       <-------MYC3                                                   <--------ATHB1       ------->MYC3                                                   --------->ATHB51     <-------MYC2                                                   <---------ICU4       ------->MYC2                                                  <---------YAB1        ------->MYC4                                       --------->ANAC58                 ------->PIF5 <-----------GT1                                       --------->ANAC58                <---------ANAC58       <---------ANAC55(2)           <---------WRKY38(1)               <---------HSFB2a(1)       --------->ANAC55(2)          --------->WRKY18(1)                <---------ANAC58 *TSS  <----------DOF2                <---------AtMYB61--------->ICU4      ------------>OsbHLH66 ----RAV1(1)           <---------YAB1<---------WRKY12        --------->MYB46(3)   --------->bZIP60(1) -TOE2(3)  ------------>CBF    <----------DOF2  --------->YAB1------->GAMYB       <---------bZIP60(1)   gggccttttaagtaacaataggcttattatgggctttggtcaaggaacaagaataattgttcaaccaagaagaacgtgcgcatgttgtcaccatctccct  1907600                                                                                             ========                                                                                             ========                                         ----------->HVH21                          <---------AHL20(2)                                         --------->WRKY12                          <---------AHL20(2)                                         --------->WRKY38(1)                       <---------AHL20(1)                                        --------->DOF5.7(2)                        --------->AHL20(2)                                        <---------MYB52(1)                         --------->AHL20(1)                                       <-------GAMYB                           --------->AHL20(2)                                   <---------WRKY18(1)                        --------->AHL20(2)                                  ----------->HVH21        <----------DOF2    <---------AHL20(2)                                --------->YAB1       <-----------GT1      --------->AHL20(2) ------>ZmHOX2a(1)                            <---------DAG2           ---------->ID1  --------->HSFB2a(2)     ========             <---------TOE2(3)  <---------AtLEC2    <-----------GT1  --------->LBD16--------->AHL20(2)             --------->MYB59<----------DOF2     <---------AHL20(2)   <---------HSFB2a(2)     ========   tgagcctccttgttttaggtagaacatcaacttttcatgaccgttgacattttttttccctctttattttccgagaaaaaataaataaaattatcctcta  1907700                          <---------ARR11(3)                          --------->AHL20(2)                        --------->ANAC58                     ------>ZmHOX2a(2)                    <------ZmHOX2a(2)                   <---------ARR14(2)                   --------->ARR14(2)                --------->HSFB2a(2)              ----------->RAV1(2)              --------->At4g35610           <------ZmHOX2a(2)        --------->ATHB12      ------>ZmHOX2a(2) --------->ANAC46                                                   <---------ANAC58 ===========================HOX2a_HOX2a                                             <----------DOF2 ==========================HOX2a_HOX2a       --------->YAB1         <---------MYB46(3)     <---------ANAC58 ============HOX2a_HOX2a--------->ANAC58  <----------DOF2   --------->ZAT2      ---------->ID1      < =================HOX2a_HOX2a      <---------YAB1           <---------ZAT2    --------->MYB52(2)    <   gttttcgatctcgatcatctggatccaagaaattactacgattgctataatgtcgatgtctcggctcggattgttgttgttcgtcgctatattgctcgtc  1907800  Previous    Next  AGI:  At3g06290.1    Description:  similar to SAC3/GANP family protein [Arabidopsis thaliana] (TAIR:AT3G54380.1); similar to hypothetical protein OsJ_024356 [Oryza sativa (japonica cultivar-group)] (GB:EAZ40873.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71065.1); similar to hypothetical protein OsI_026146 [Oryza sativa (indica cultivar-group)] (GB:EAZ04914.1); contains InterPro domain SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062) Range:  from: 1899048    to: 1907303    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g06300.1    Description:  AT-P4H-2 (A. THALIANA P4H ISOFORM 2); oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors / procollagen-proline 4-dioxygen. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT5G18900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71052.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Metridin-like ShK toxin (InterPro:IPR0035 Range:  from: 1907588    to: 1909810    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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