Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------AHL20(2)       --------->AHL20(2)       <---------ICU4       --------->ATHB51       <--------ATHB1      <---------ATHB12     --------->WOX13(1)                  <---------DAG2      <---------ATHB51 --------->ANAC58              <---------YAB1                       <----------DOF2 -------->ARR14(2)     --------->ANAC58       ---------->DOF2  <----------DOF2            --------->TOE2(3) ---------ARR14(2) --------->ANAC58      ----------->GT1--------->ZAT6    --------->ARR11(3) -----ZmHOX2a(1)   --------->ANAC58     --------->ICU4--------->YAB1      <---------ARR11(3)--------- ------TOE2(3)<----------ID1   <---------At5g28300 --------->YAB1   --------->YAB1<-----------GT1   aggattcaataatttgacgacaaacaaggcaattaccgagaaaagattaaaagtcataatactaactttatagtaagataatattaaacttactttaaat  1863900                                                                              <---------------AGL15                                                                             ----------------->AGL3                                                                             <-----------------AGL3                                                                             ----------------->AG                                                                             <-----------------AG                                                                             <-----------------AGL1                                                                             <-----------------AGL2                                                                           --------->ANAC58                                                                           --------->ANAC58     <----                                                                           --------->ANAC46     -----         <------NtERF2                                                 --------->ANAC58     ---------        --------->LBD16                                              --------->CCA1(2)      <--------       <---------ANAC58                                            --------->YAB1          <---------AHL20(1)       <---------ANAC58                                          <---------WOX13(1)        --------->AHL20(2)       <---------ANAC46                                       <---------ATHB12--------------->AGL15      <---------LBD16                    >>>>>>>>>TBF1        <---------YAB1 ----------------->AGL2 >AHL20(2)                            >>>>>>>>>TBF1     <---------YAB1 --------->ANAC58    <---------AHL20(2)   gcttcaatggcggataacttctccaaactcgtaagtagaagaagaagaagattagatgatgacaatgaatgatacacaatccacaattggcaattttttt  1864000                                       --------->LBD16                                      <---------HSFB2a(2)                                      --------->HSFB2a(2)                                      <---------HSFC1(1)                                      --------->HSFC1(1)                                 <---------GLK1(2)                                 <---------ARR14(2)                               <---------TOE1(2)                       <---------ARR14(2)                       --------->ARR14(2)                                  <---------ANAC58                       --------->ARR11(3)                            --------->ARR11(3) -----AHL20(2)   --------->TOE1(3)--------->GLK1(1)                  <---------GLK1(2)    --------->ANAC58 ---->AHL20(2)   --------->TOE2(3)<---------GLK1(1)        ---------->DOF2 <---------ANAC58 >AHL20(2)     ------->TEIL------>ZmHOX2a(1)         ----------->GT1 <---------ARR11(3)   --------->ANAC58 -AHL20(2)    <---------ARR14(2) --------->ARR14(2)  <------ZmHOX2a(1)   <-----------GT1--------->MYB52(1)   aatttttggacaagaagaaccttaaaatcctcccagatttccagaagacaagggaggattaaaaagtcttagatttttcttgactagacaaaacgaaatg  1864100                                                                                           <---------ZAT18                                                                                  --------->GLK1(1)                      *TSS                             ------>ZmHOX2a(2)          <---------GLK1(1)                     <------ZmHOX2a(1)                <---------GLK1(1)        <---------YAB1                   <---------TOE2(3)                 <---------ARR11(3)     --------->GLK1(2)               --------->YAB1              --------->At4g35610             --------->ARR14(2)          --------->ZAT18  --------->ARR11(3)        --------->ARR11(3)    <---------ARR14(2)      <---------ICU4<----------ID1         <---------At4g35610            <------ZmHOX2a(1)<---------ZAT14   --------->YAB1--------->CCA1(2)         ----------->GT1  ---------->DOF2<---------GLK1(2)        -  <---------------AGL15    <---------ARR11(3)    <------------CBF       <---------TOE2(3)  --------->ZAT14  --------------->AGL15---------->DOF2----------->HVH21==========================HOX2a_HOX2a  ------>NtERF2   tatactaataagtgcaaagataaggaaaagaactcaaaatttgacagctaaaattgatctcccaaagaaaaatttaggattctgatttctcagtgcagcc  1864200                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                             ========                                                                                             ------>MYB46(1)                                                              ----------->RAV1(2)            --------                                                        <----------TaMYB80                   ------>MYB83                                                      <-------GAMYB                          --------                                                      --------->At5g28300                   ---------                                                     ----------->GT1                       --------->DEAR3(1)                                                  --------->MYB52(1)                       <---------MYB111(2)                     --------->SPL7               ------------>AtMYB77                     --------->AtMYB61                    ------>NtERF2                ----------->HVH21                         <---------MYB46(2)                 --------->ATERF1(1)            <---------WOX13(1)                         --------->MYB46(3)                 <------NtERF2                 --------->ARR14(2)                          <---------MYB111(1)              <------ZmHOX2a(1)             --------->ANAC55(2)                            <---------MYB55(2)   ------------>CBF <------NtERF2           <---------ANAC55(2)                      ----------->HVH21  --------->ANAC58 <---------SPL7          <---------LBD16<-----------GT1       <-----------GT1    --  --------->ANAC58 ----------->HVH21      <-----------GT1--------->KAN4(2)    <---------GLK1(1)    -- --------->DAG2--------->ALFIN1---------->DOF2 <------------CBF ----------->HVH21<---------At5g28300- --------->DOF2<---------DEAR3(1)  ------------>CBF  <---------MYB46(3)      --------->ARR14(2)   ---   aaaaaagcaatttagaggaggcggacggagagaaaaagacaattttacggattgacggttatacccctgatgtttactggatttaccatgacaccaaccc  1864300                                                            --------->ALFIN1                                                            <--------P                                                           <---------MYB52(1)                                                         <---------ATERF1(2)                                                         --------->ATERF1(2)              <------------CBF     <---------WRKY38(1)  <---------LBD16             <--------ATHB1    --------->ALFIN1         ----------------->AGL1             -------->HAHB4  ========================================MYC_MYB             --------->ATHB51<---------TGA1a          --------->ALFIN1             <---------ICU4  <---------O2           --------->ALFIN1       --------->At5g28300<---------ARR14(2)      <---------DEAR3(2)    --------->ZAT18      ------>NtERF2           <---------At1g77200  <---------DEAR3(1)    ----------->HVH21        <---------DEAR3(1) ------->MYB46(3)       <---------ZAT18         <------NtERF2 --------->HVH21      --------->At4g35610     =========================================bZIP_DOF --------ETT(2)       <---------At4g35610     <---------ANAC46 ======================================MYC_MYB<---------ANAC58       <-----------RAV1(1) ->MYB52(1) <---------AHL20(2)------->MYC3    <---------O2<---------DEAR3(2) >P <---------ZAT18   --------->ZAT2          <---------ANAC58 <---------------AtSPL3       <-------- >MYB55(1)  --------->AHL20(2)<-------MYC3    =========================================bZIP_DOF ------->ETT(2)      --------->MYB52(1)       --------->TGA1a <------MYB83                  --------- ------->DEAR3(1)   <-----------RAV1(2)       --------->O2<---------RAP2.6(3)     <----------DOF2---- ----->NtERF2--------->ATHB12--------->TGA1a  =======================MYC_MYB<----------DOF2 <-------- ------>SPL7<---------ATHB51 --------->O2     <---------TGA1a <------MYB46(1)     --------->TOE2(3) <   gacgaccgcgctaaataattgcccagcggacatgtgggcaacgaagtcgcgtcggtgtgccggtaggggtactgttgtcttttactttaaacaattaata  1864400                         <-------MYC3                     <------NtERF2                     ----------->HVH21                    <-----------HVH21                   <---------ANAC58                   <---------ANAC58               <---------WOX13(1)              <---------ANAC58              <---------ANAC58                                                       ----------->GT1  <---------ANAC46 <---------bZIP60(1)                                          <---------At4g35610<- -AHL20(2)   <---------MYB46(3)                                                 --------->ZAT14    -- >AHL20(2)  <---------YAB1 <-------TEIL                       <-----------HVH21 <---------ZAT14   --- ----->ANAC46--------->ATHB12------->TEIL                    --------->DEAR3(1) --------->At4g35610-- -ICU4   <---------ANAC46------->MYC3           ------>ZmHOX2a(1)     ------>ZmHOX2a(1)     --------- ---------ANAC46   --------->bZIP60(1) <---------YAB1     <---------ALFIN1<-----------GT1 ---------->DOF2   cgtcgtgtatggtgttgattggcgtcacatgcatttgttttgttattgtcctctctctctccaccgtcgctcctattttctctgcagaagtgaaaagaaa  1864500                                                                 --------->ICU4                                                            ----------->GT1                                                            --------->YAB1                 <---------AHL20(2)                                                       --------->AHL20(2)                <---------RVE1(1) --------AHL20(2)                                    ----------->GT1                     <---------CCA1(1) ------->AHL20(1)           --------->AHL20(2)<----------DOF2  <---------ICU4           --------->ARR11(3) ------>AHL20(2)           --------->AHL20(2) <---------------AGL15                     <---------GLK1(2) ------->AHL20(2)          <---------ATHB12   --------------->AGL15                     <---------ARR11(3) -->GT1        --------->AHL20(2)   <---------YAB1 ---------->DOF2 <-----------GT1     <---------RVE1(1)   aaaaattgttttgtcaaaaaaatggctcaataaataagacgattgtcactttaaaaagaaaatagtaattatccaaatatcaatttcagagatttttttg  1864600                                    <---------YAB1                                  --------->YAB1                                  <---------ICU4                               <---------ICU4                              --------->ICU4                       <---------At4g35610                  --------->At4g35610                  --------->ZAT2 <---------YAB1                                    --------->YAB1                  <---------At4g35610--------->ZAT6                      --------->MYB52(1)             --------->ARR11(3)--------->YAB1                          <---------MYB52(2)         ---------->DOF2      <---------YAB1                   <---------------AtSPL8       --------->CCA1(2) ----------->GT1                       --------------->AtSPL8    ----------->GT1  <-----------RAV1(2)                    --------->ARR11(3)    <---------YAB1  ---------->DOF2 <---------ZAT2 --------->ICU4       <---------MYB52(1)------->GAMYB   gctaaaaagataaaagagctagctcagatgttataattatcagtaaatggaaaaccgttggagatttagtacaactaacaatttttgataagacaatata  1864700                                                        ---------->DOF2                                                       --------->YAB1            --------------->AGL15                --------->TOE2(3)       <<<<<<<<<TBF1                            --------->At4g35610                               <--   <-----------GT1                          <---------DAG2                                        <-- <---------HSFB2a(1)                        <----------DOF2       --------->AtLEC2                --- --------->HSFB2a(1)             <-----------GT1<---------At4g35610                --------->YAB1 ---   agaattttcttcttcttagattagtagttgtctattttcaataccactttagcttaatcaaagtgtccattcacattattcacaaaaatagttcatctat  1864800  Previous    Next  AGI:  At3g06150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G19060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71094.1); contains InterPro domain Immunoglobulin E-set (InterPro:IPR014756) Range:  from: 1861803    to: 1864122    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g06160.1    Description:  transcriptional factor B3 family protein. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G06220.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82365.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76392.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 1864332    to: 1867198    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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