Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              ------->TEIL                                                    ------>ZmHOX2a(2)                                                    =====================================HOX2a_HOX2a                                                  --------->ARR14(2)                             <---                                                  <---------ARR11(3)                        ---------                                                  <---------AGP1                            ---------    <----------DOF2                               --------->ARR11(3)                        <-------- --->GAMYB --------->AHL20(2)                    <---------CCA1(2)                         <---------GLK1(2) --->At4g35610                                <---------LBD16                    --------->TOE2(3) ---->RAV1(1)                                ----------->RAV1(2)   <----------DOF2------>ZmHOX2a(1) --WRKY38(1)   ---------->DOF2     ----------->GT1<---------ARR14(2)          <-----------GT1--------   agaaaactttcattttaaaaagaaaacagagaaggaatggtgaagaaacctggatcttcatgaactcttctttactcatttttcctcaactcaaaatctc  1854700                            --------->At4g35610                            <---------ZAT2                    ====================HOX2a_HOX2a                    ------>ZmHOX2a(2)                   =====================HOX2a_HOX2a                   --------->CCA1(2)                   <------ZmHOX2a(2)                  <---------AGP1                  --------->ARR11(3)    <---------ANAC46       <----------DOF2      <---------At4g35610 --------->TOE2(3) -------DOF2      <---------ARR11(3)    <---------ANAC58 >GLK1(2)         --------->ARR14(2)    <---------ANAC58 >ARR11(3)        <---------ARR14(2)   --------->MYB52(2)              ------->GAMYB -ARR11(3)        --------->AGP1 ------>ZmHOX2a(1)               --------->YAB1 ->RVE1(1)       <---------CCA1(2)   <---------MYB52(1)     ----------->RAV1(1)     <---------YAB1---   tttctctcgctttagaaccagatctgagacagctcctctgttacttgcaacttcaatctggacaacataataacccacaaattgttatgtttatcacatt  1854800                                                             <----------DOF2                                                            <---------DAG2                                                         <-----------GT1                                                        <---------ARR14(2)                                                        --------->ARR11(3)      ---------->DOF2                               <------ZmHOX2a(1)   --------->ANAC46                               <---------TOE2(3)               ---------->DOF2   --------->ANAC58--------->ANAC58        --------->At5g28300       <---------TOE2(3)           <---   --------->ANAC58--------->ANAC58 <---------ARR14(2)  --------->ARR14(2)     ----------->RAV1(1) ------->DOF2      --------->ANAC46 --------->ARR14(2)  <---------ARR11(3)    <----------ID1  <------ZmHOX2a(1)   caaagacgcaaagaagagaacacaccattacatagacatatatgctgtaactgaggaagatacctttttttaagtttagaacaacaaagaaacagaggag  1854900                                                                                                    -                                                        --------->ARR11(3)             --------------                             ---------->DOF2    ---------->DOF2                        --------->TOE1(3)                     --------->ANAC58        >>>>>>>>>TBF1      <----------DOF2        --------->TOE2(3)    <------ZmHOX2a(1)--------->ANAC58 ---------->DOF2   <---------ARR11(3)      <------MYB46(1)     - ---ZmHOX2a(1)     ---------->DOF2------------------------>ANAC81               <------MYB83      <--   gaagaaggagaatgagagagggaaagcacttgaaagaaggcaaagaagaagaaagaaagatttcgactttgcagtattaagttggtgaacattaacttct  1855000                                                                   *TSS                                                               <---------AHL20(2)                                                              --------->AHL20(1)           <---------       <----------DOF2                                        <---------AHL20(1)           <---------ARR11(3) -------->bZIP60(2)                                     <----------DOF2                    --------->ARR11(3) --------->TaNAC69(2)                                 --------->At4g35610---------->DOF2--------->YAB1 -------->ANAC46         ---------->DOF2     ---------->DOF2  --------->AHL20(2)   ------------>CBF -------ALFIN1  <-----------HVH21         ----------->GT1     <---------AHL20(2) --------->ZAT18  <--   ccacttcatctttttcagagtcagagagaaagagagagagagagaagtaaagtcgctgcttcaatttattagccagaaaggagtgagcaatagtatctta  1855100                                                                                        <---------PCF2                                                                                     --------->ALFIN1                                  <---------AHL20(1)                               <---------ANAC58                                  --------->AHL20(2)                            --------->ALFIN1     <---------ANAC46 --------->AHL20(1)                                        <---------AtMYB61 <---------ANAC58     <---------ARR11(3)         <---------GLK1(2)        ---------->DOF2 <---------ANAC58     <---------AHL20(1)     ---------->DOF2       ----------->GT1 --------->ALFIN1 --ARR10    <----------DOF2       <---------AHL20(2)               --------->ANAC58<---------ANAC46 ---------GT1    ------------>CBF --------->AHL20(1) <---------YAB1--------->ANAC58<---------ANAC58 <   tttccttgcctagactttagacaatattttttgtaataaattcaacaaaaagattagcattagaagaacaagaaaaaaaagagtggtgtggggctcgttt  1855200                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                                                                               <---------GLK1(1)                                                                               --------->GLK1(1)                                                                              <---------AGP1                                                                              --------->AGP1                <---------YAB1                                                <-----------ARR10              <---------ICU4                                                  <---------ARR11(3)              -------->HAHB4                                                  <---------ARR14(2)             <---------ATHB12                                                 --------->ARR14(2)             --------->ICU4                                 <---------ICU4   <---------CCA1(2)            <---------TOE2(3)                 --------->AHL20(2) <---------ANAC55(2)           --------->YAB1  <---------ANAC46   <---------AHL20(2) --------->ANAC55(2)          <---------AHL20(2)                 <---------AHL20(2)<-----------GT1--------->ARR11(3)   ------->TEIL <---------REM1(1)         <---------ICU4 --------->YAB1  ------>NtERF2 ---------YAB1--------->YAB1           --------->YAB1 <---------ZAT18  <---------RAP2.6(2)   ttatgaatctttttaatgatgaaggcctctcgtatagtatttcataatttatatagtgaacataatcacgttttcggccagatctctcttaagtttcccc  1855300           --------->ZAT6           <-----------GT1                         <-----------GT1         -------->HAHB4                         --------->AHL20(2)                              <----         --------->YAB1                   <-----------GT1                                    <-------        <---------YAB1                 <---------ICU4                                       <--------      --------->YAB1                   --------->AHL20(2)                                  <---------ANAC58      <---------ICU4                   <---------AHL20(2)                                  <---------ANAC58   --------->YAB1                  <---------AHL20(2)                                      <---------ANAC46 --------->AHL20(2)                --------->AHL20(2)                                 --------->YAB1 <---------AHL20(2)               --------->AHL20(2) <-----------GT1                 <---------YAB1   tgttttaataataatactatttgttttccaattgcatttaattaatacaattttttcacgatttcattgttcatcgaggcatttactatcatcgcttgtt  1855400                                                             <---------AHL20(2)                                                             <---------AHL20(1)                                                             --------->AHL20(1)                                                            --------->YAB1                                                            --------->AHL20(2)                                                            <---------AHL20(2) <------------MYB.PH3(1)                                             --------->CCA1(2)               --------->MYB52(1)                 --------->YAB1             --------->ARR11(3)     <---------AHL20(2)   ---------->DOF2            --------->GLK1(2)<---------AHL20(2)  --------->AHL20(2) -----MYB46(3) --------->ANAC58     ---------->DOF2     <---------AHL20(2)--------->YAB1          --- --MYB46(3)    --------->ANAC58 --------->TOE2(3)    ----------->GT1     <---------YAB1          ---- --DOF2     <---------ATHB12  --------->ICU4<---------ARR11(3)    <---------AHL20(2)   <----------DOF2   gttgataaagcctaatcaagcatgaaaccgaaattcttaaaagtgagatataatcaagttaattatattttaaatatgataacggttttctttgggaaaa  1855500                                                                                 <---------AHL20(2)                                                                     <---------AHL20(1)                                                                     --------->AHL20(1)              <---------ANAC58                                       --------->AHL20(2) <---------TOE2(3)                          --------->DAG2           <---------AHL20(2) ------>AHL20(1)   <---------REM1(1)       ---------->DOF2     <------ZmHOX2a(1) --------->AHL20(2) - ----->YAB1   <---------ANAC58 <-----------GT1            <---------REM1(1)  <---------AHL20(2)     <   aataatgtaatggttttcttggtgaagcgtttttgacaacatggaaaaagggttctcttggtgaaggacaatttattgtttatttaaatgaagcatggct  1855600  Previous    Next  AGI:  At3g06130.1    Description:  heavy-metal-associated domain-containing protein. similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19090.2); similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G19090.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71268.1); contains InterPro domain Heavy metal transport/detoxification protein; (InterPro:IPR006121) Range:  from: 1852895    to: 1855067    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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