Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    <-----------GT1 ------>AHL20(2)           ----------->GT1 ------>YAB1            ---------->DOF2                                               --------->ATHB12 ------YAB1       <----------DOF2                                          --------->ANAC46 -----AHL20(2)    <---------DAG2                                          ------>ZmHOX2a(1) ---->AHL20(2)<---------MYB52(1)           <---------DAG2             <-----------ARR10 --->YAB1   <---------HSFB2a(2)            <----------DOF2            --------->ARR14(2) ---YAB1    --------->HSFB2a(2)        <---------ZAT18                <---------ARR14(2)   taatatacaatcttctggtacttttcaaaaggaaaatttagaacacttttactcaagtctcaagttagtgagtatcctcgcatctaaatgatttagtttc  1840400       ------>ZmHOX2a(2)    -------->HAHB4      <---------ZAT14                                            ----------->GT1    --------->ATHB12    --------->ZAT18                         <---------YAB1   <-------MYC3    <---   --------->ICU4 <---------HSFB2a(2)                         --------->YAB1     ------->MYC3  <-----   <---------YAB1 --------->HSFB2a(2)                       ------->TEIL------>ZmHOX2a(2)      ------   <---------ATHB12     <---------ZAT18                <XXXXXXXXXXXXXXXXXXXXMIR864-5P  --------->AHL20(2)   ttctaatgatcgaacaatttctcgagagcaccatctaaatctgaatacatttagttggaatgaatcatatttgatctaaaacacatggtttaaatttctg  1840500                                                      --------->AHL20(2)       -------->P                                     <---------AHL20(2)   --------->ANAC58              <---------TOE2(3)  --------------->AGL15                       -----   --------->RAP2.6(2)         <---------AHL20(2)   <---------------AGL15                       <----   --------->ANAC46           --------->AHL20(2)   --------->TOE2(3)                            -----   --------->ANAC58        --------->ATHB12 <----------DOF2                                   ------- ------AtLEC2             --------->ICU4    --------->TOE2(3)                 --------->AHL20(2)----- ----HSFB2a(2)            <---------YAB1 <-----------GT1                  <---------------------WRI1 --->HSFB2a(2)          --------->YAB1   <---------AHL20(2)     <---------ARR14(2)   ---------->DOF2   caagaccgcaaccagactcagacatatcatgatttaatgaaatttactttaattcttaaattagaagttctgaaatagcattaaatacaaagtagcaacc  1840600  --------->TOE2(3)  <---------MYB59                                             <---------ICU4 ---->AtMYB61                                                <---------ATHB51 -----MYB59                                                  --------->ICU4                     ----- ---->TOE1(3)                                  <-----------GT1-------->HAHB4                    ----- ->P  <---------YAB1             ------------>CBF ----------->GT1                    ---------->DOF2 ---->TOE2(3)        --------->ZAT14  --------->YAB1   <-----------GT1 --------->At4g35610      <----   taaaccttactattcgtagactgtttactcactcagtcaataaacatttgaaccgtttaactaattatgcattagctctcatagaacaaaagaccaaaaa  1840700                             ------------>CBF            --------->ARR14(2)            <---------ARR14(2)        <-------TEIL  --------->ARR14(2)       --------->AtLEC2      <---------ATHB12                                                   -----  --------->YAB1      <---------ARR14(2)                                                 <---------HSFC1(2) ---->ARR11(3)     --------->ANAC46                                                      <---------HSFB2a(1) ---->GLK1(2)      --------->ANAC58                                                      --------->HSFB2a(1) -----ARR11(3)     --------->ANAC58      --------->GLK1(2)    --------->ETT(2)           --------->HSFC1(2)   tctataaacatgcatatatacacgaatacgaatcaatgttgagaatctatagtttaagtagtagtcgacactaagaacatgaagatgaagaagcttctta  1840800                                                       <---------YAB1                                                   <---------At5g28300                       <---------MYB59            <-----------GT1                      <---------ANAC55(2)      --------->MYB52(2)                            ------->TEIL                      --------->ANAC55(2)    <---------ANAC58                  --------->ANAC58 ----->DOF2    ---------->ID1  ---------->ID1<---------ANAC58----------->HVH21 --------->ANAC58   aagttgtgtttctcttggtcgcttacttaacttgttccattgccatggctagttaccatggttgtaacagggttgcagagaaggcaacgagaatgaatgt  1840900             --------->ANAC58                 >>>>>>>>>TBF1       --------->MYB59             --------->ANAC58              >>>>>>>>>TBF1         <-----------RAV1(2)             --------->ANAC46        <------ZmHOX2a(1)         <-----------HVH21          <-------TEIL        --------->TOE1(2)         <---------ARR14(2)                    <------         --------->CCA1(2)   <---------HSFC1(2)         --------->ARR14(2)                 --------->ANAC46  <------NtERF2 --------->CCA1(2)<---------TOE1(1)      --------->GLK1(2)      <---------At4g35610 <-   agtcggagaagattcaagaaatgagtttggaaactacgaggagaagaagaagaaggcgaatttgtggtcaggtcgaaagttagcttctggtccaagtcgt  1841000                                              --------->AHL20(2)                                             --------->AHL20(2)                                          <---------RVE1(1)                                         --------->ARR11(3)                                         <---------ARR11(3)                                         <---------AHL20(1)                                       <---------TOE2(3)                        <---------ANAC46                                    <---------AHL20(2)                     <------MYB83                                    --------->AHL20(2)                     <------MYB46(1)                                 <---------AHL20(2)                     <-------GAMYB                                 --------->AHL20(2)                    --------->MYB55(2)        --------->ZAT18          <---------ICU4                        <---------MYB46(3)   <---------MYB46(3)            <--------ATHB1                        --------->MYB52(2)   --------->ALFIN1              --------->ATHB51                      --------->MYB111(2)  --------->ALFIN1              --------->ICU4<---------AHL20(2)   <---------YAB1 ---ANAC46                      <---------ATHB51                  <---------TOE2(3)         <-------- --------TOE2(3)           ----------->GT1<---------CCA1(1)     <---------AHL20(2)   ----------->GT1<   agaggttgtggccactaaatttttagttggggtaataatttaagatatttaatttcatttctctaatttatgtttgttggtatcgtttagtaatatgagt  1841100                                                                                               <-----                                                                                            <--------                             <---------ARR14(2)                                             <--------                             --------->ARR14(2)                                             <--------                    ------>MYB83                                                      <---------YAB1               <-----------GT1                                                    <---------RVE1(1)           <---------YAB1   <------ZmHOX2a(1)                                    <---------GLK1(2)      <------MYB83  ------>MYB46(1)            ------->TEIL       --------->AHL20(2)  <---------AHL20(2) -YAB1<------MYB46(1)   ---------->DOF2  --------->TOE1(2)    --------->AHL20(2) --------->ARR11(3) ---------AHL20(2)<---------MYB59      <-------TEIL    --------->ZAT14           <---------ARR11(3) <   attttagtgggttcttataacctaatgaaaggatttgaatattcatacgaatttcgcttcactataaaatatatgtgactaaagatttttaattgcgttc  1841200                                                                                                 <---                                                      --------->ARR11(3)                    ---------                                                      <---------ARR11(3)                    ---------      ----------->GT1                                 --------->ARR14(2)                    ---------      <---------ANAC46                               <---------CCA1(2)                      --------- --TEIL                                     <-----------GT1                                 <-------- -ANAC46                                  <----------DOF2                                  --------->RAP2.6(3) -ANAC58      <----------ID1              <---------DAG2                                  --------->MYB52(1) -ANAC58   ---------->DOF2------>NtERF2  <---------ANAC58                --------->At4g35610--------- ---------AHL20(2)  ---------->DOF2      <---------ANAC58         <---------MYB52(1)    <-----------HVH21   atttcattgtgtaaaaagaacaaaatgccccctgttttcatttgctttaccctctatatcttcaatccgataagtagctctctgttttcgcatcacggca  1841300  Previous    Next  AGI:  At3g06090.1    Description:  unknown protein Range:  from: 1840779    to: 1841018    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g06100.1    Description:  NIP7;1/NLM6/NLM8 (NOD26-like intrinsic protein 7;1); water channel. Identical to Probable aquaporin NIP7-1 (NIP7-1) [Arabidopsis Thaliana] (GB:Q8LAI1;GB:A0MEU4;GB:Q1PES9;GB:Q9M8K8); similar to NIP4,1/NLM4 (NOD26-LIKE INTRINSIC PROTEIN 4,1), water channel [Arabidopsis thaliana] (TAIR:AT5G37810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71103.1); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 1841177    to: 1843099    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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