Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ----------->RAV1(1)            ------>NtERF2            --------->LBD16           --------->ANAC46          --------->RAP2.6(3)          <---------LBD16       --------->KAN4(2)      --------->KAN4(1)      <---------KAN4(1)      <---------HSFB2a(1)      --------->HSFB2a(1)      <----------TaMYB80      --------->HSFC1(2)                          --------->DAG2     <---------KAN4(2)                           --------->MYB52(1)     <---------GLK1(1)       -----     --------->ARR14(2)                          ---------->DOF2        --------->GLK1(1)     -------     <---------ARR14(2)                    --------->ANAC58       --------->CCA1(2)         ---------     ---------->TaMYB80                    --------->ANAC58  ---------->DOF2      <------ZmHOX2a(1)   gaaaacgaatattccggcacaacatcagaactcagaaacctgatcaagacataaaggaacatgaaaagatagagatttcttacaggaagaccaaagatga  1827500                              --------->MYB46(3)                         <---------ARR14(2)                         --------->ARR14(2)                         <---------ARR11(3)                     --------->YAB1                    <---------ATHB12                   ------>MYB46(1)                                                              -----                   ------>MYB83                                                           <-------TEIL                  --------->WOX13(1)                                                     --------->CCA1(2) <----------DOF2--------->MYB46(3)                                                       --------->GLK1(2) ------>STF1   --------->ANAC58                                                         --------->ARR11(1) ---->TGA1     --------->ANAC58                                                 ---------->DOF2 ----- >YAB1   ----------->RAV1(2)  <---------MYB52(2)    <---------GLK1(1)     <-----------HVH21   -------   cgactttcttcccctgcaaccaatcaatatccacaaacgttttgtcagaaattgaaatccccctctgaattgaaattgtcagaaaagagagattcgaacc  1827600                                                                                          ------>NtERF2                                                                                         --------->DEAR3(1)                                                                                        --------->ATERF1(1)                                                                                        <------NtERF2                                                                                        <----------CDC5                                                                                       <---------ATERF1(1)                                                                                       --------->ABI4(1)                                                                                       ------>NtERF2                                                                                      --------->ATERF1(2)                                                                                      <---------DEAR3(1)                                                                                      --------->RRTF1(2)                                                                                      --------->RRTF1(3)                                                                                      --------->RAP2.3(3)                                                                                      --------->RAP2.3(2)                                                                                      --------->DEAR3(1)                                                                                      <---------ATERF1(2)                                                                                     --------->DEAR4(2)                                                                                     --------->DEAR3(2)                                                                                     --------->RAP2.6(1)                                                                                     --------->ERF1                                                                                     <---------ABI4(2)                                                                                     --------->RAP2.3(1)                                                                                     --------->RRTF1(1)                                                                                     --------->ATERF1(1)                                                                                    <---------ORA47(2)                    <---------ANAC46                                                <---------RAP2.3(1)                   <---------AtMYB61                                                <---------ERF1                   --------->ALFIN1                                                 ------>NtERF2                   <------NtERF2                                                    <---------DEAR4(2)                 <---------bZIP60(2)                                                <---------ATERF1(1)                 <---------ANAC58                                                   <---------RRTF1(1)        ----------->HVH21                                                           <---------RAP2.6(1)      <---------At4g35610                                                          <---------RAP2.3(2)     <---------ARR11(3)                                           <---------HSFB2a(2)--------->ORA47(2)     --------->ARR11(3)                                           --------->HSFB2a(2)<------NtERF2    --------->RVE1(1)                                ----------->RAV1(2)           <---------DEAR3(1)    --------->CCA1(1)                                <---------ZAT2                --------->DEAR3(1)    <---------RVE1(1)                --------->ARR14(2)       <----------DOF2      <---------RAP2.3(3)    <---------GLK1(1)       --------->GLK1(2)        <---------At4g35610          --------->ATERF1(1)    --------->GLK1(1)       <---------ARR14(2)       --------->ZAT2               --------->RAP2.3(1)   <---------ARR11(3) --------->ALFIN1             <-----------RAV1(2)         <-----------RAV1(2)   --------->ARR11(3) <---------ANAC46  <---------ALFIN1 <---------ANAC58   --------->ANAC58      <-- ---->TOE2(3)    <---------ANAC46    <---------ARR14(2)  <---------ANAC58   --------->ANAC58     ---- ---->TOE1(3)    <---------ANAC58   <------ZmHOX2a(1)--------->At4g35610    --------->ANAC46     <--- >TEIL--------->At4g35610   --------->ARR14(2) <-----------HVH21 <---------LBD16 <---------ATERF1(1)   ttgaagatatctgacaatggcgtggtggagaatttggaggaaacaccttcgtcccagctgcgagctttctggagagaaacgccaggcgccgccgaggtta  1827700                                                                    ------>ZmHOX2a(2)                                                                   <------ZmHOX2a(2)                                                                  <---------ARR14(2)                                                                  <---------ARR11(3)                                                                  --------->ARR11(3)                                                             --------->ATERF1(2)                                                             --------->DEAR3(1)                                                            <---------RAP2.6(2)                                                           <---------At5g28300                                                --------->LBD16   --------->ARR14(2)           --------->LBD16                     <---------LBD16  --------->DEAR3(1)         <---------LBD16                      ------>ZmHOX2a(2)<------NtERF2       <---------SPL7                         <---------LBD16<---------ATERF1(2)    <---------ZAT18                          <------ZmHOX2a(2)--------->LBD16   --------->AHL20(2) ---------HVH21<---------ZAT2               --------->ARR14(2)------>NtERF2 ----------->GT1 ----->bZIP60(1)                            <---------ARR14(2)<---------At4g35610                   - ------bZIP60(1) <----------DOF2     ------->TEIL <---------ZAT18 <-----------ARR10         <--------   tgtcagtgccttccgcgagctttgagaaacccctcgatgaaactccgatccgggcactatttgccgccgatcttagtgccgataaatttcttagctttag  1827800                                                                                               ------                                                                   *TSS          --------->HSFB2a(2)                                      <---------ANAC58            <---------ANAC58     <---------ARR11(3)                                      <---------ANAC46            <---------ANAC58     --------->ARR11(3)   --------->bZIP60(1) <---------TOE2(3)      --------->TOE1(2)   <---------ANAC46 ---------->DOF2 ---------->HVH21      <---------YAB1 <---------ANAC58     --------->ZAT14       <---------HSFB2a(2) --DOF2  --------->DEAR3(1)        <---------MYB52(1)      <---------ZAT14<---------ZAT18 <----------DOF2   aattgacatcgccatcgctgaaaataagattgagaccgtttcttggttccttcgattactgtatagtgtcgtttatggcacttctcaaagacctttctaa  1827900                                                   ---------->DOF2                                           ------->MYC2                  --------->ANAC58                                           <-------MYC3                  --------->ANAC46                                         ------->TEIL                    --------->ANAC58                        <---------MYB52(2) ------->MYC3              --------->ANAC58                   ----------->GT1     --------->ZAT18               --------->ANAC58                <---------MYB52(1)     <---------ZAT14              --------->ZAT14        <---------ICU4  --------->MYB46(3) <-------MYC2             <---------ZAT18 ---->DOF2     <---------RAP2.6(3)     --------->ZAT14            --------->At4g35610            <---   agagacttaatcgttgccgttttgtaacaaacaaatcagactgcacgttgtttaaaagcctcaagaacagcacacactcaaattttggttttgaagtttt  1828000                                                                   <-------TEIL                  ----                                                         --------->ANAC58               <---------GLK1(1)           <-------TEIL                                  ----------->GT1           <----------DOF2   <----------DOF2             ----------->GT1           --------->ANAC58       <---------ARR11(3) --------GT1       <-----------GT1                  <---------WRKY18(1)         --------->ARR11(3)   tacttctttcaaatacatcatttacatttcatcttgtgaaaaacattcacttcttgaccaagtaaaaaatacattcaaatgagttctttgatttctctat  1828100                                ----------->GT1                                --------->LBD16                  <---------ANAC58                                   --------->ANAC46     ----------->GT1          <---------LBD16                       --------->YAB1     <----------ID1      ---------->DOF2    <---------ICU4 --------->ANAC46       --------->GLK1(2)   ---------->DOF2<---------ANAC58        ------->TEIL   --------->HSFB2a(2) <---------ETT(2)      <- ----->YAB1--------->MYB52(1)--------->MYB52(1)          <---------HSFB2a(2) --------->ETT(2)      --   aaaaaaaaagaaaaaacagagcttgttcaaagaccggaaacatgaatcttgacgagtttctacaaaactatcagcaatgtcgatattctgaattggtata  1828200            --------->ALFIN1            <------NtERF2          <---------ANAC46          <---------ANAC58          <---------bZIP60(2)          <---------ANAC58         <------NtERF2      <---------ANAC58      <---------ANAC58     --------->At4g35610     --------->STY1(2)     <---------ZAT2                                                    --------->ANAC58     --------->ZAT2                             <---------ATHB12       --------->ANAC58    --------->ETT(1)     <---------STY1(2)                   --------->ARR14(2)          ---------->DOF2<-------TEIL --------ZAT18  --------->MYB52(1)       <---------ARR14(2)   --------->At4g35610  --------->CCA1(2) ------->ZAT18<---------SPL7    <---------HSFB2a(1)       <---------TOE1(3)       <---------ARR11(3)   gtcgactagctggcgtggtaccggactgagaagaaggtttgagaatacccatcaatgtttaagcttctgccaaaagcacttcaagatacattgtcgggct  1828300                                               --------->ANAC58                                               --------->ANAC58                                               --------->AtLEC2                                              --------->WOX13(1)                                            --------->WRKY18(1)                                           <-----------HVH21                                    <-----------RAV1(1)                                    --------->bZIP60(1)                                    <---------REM1(1)                 --------->ANAC58   <---------bZIP60(2)              <---------YAB1            ------                 --------->ANAC58   <---------bZIP60(1)    --------->GLK1(2)                  <------          ---------->DOF2      --------->YAB1---------->DOF2       --------->YAB1        <------ZmHOX2a(1)   gtctgaaattacaaaagagaagcaattttagaatagtgatgtcgcagtcaagcaagagcaaattctatatgatgacaacttgatggcattaggaacttac  1828400  Previous    Next  AGI:  At3g06050.1    Description:  ATPRXIIF/PRXIIF (PEROXIREDOXIN IIF); antioxidant/ peroxidase. Identical to Peroxiredoxin-2F, mitochondrial precursor (PRXIIF) [Arabidopsis Thaliana] (GB:Q9M7T0;GB:Q8LEJ1;GB:Q8LPM1;GB:Q941C2); similar to TPX1 (THIOREDOXIN-DEPENDENT PEROXIDASE 1), antioxidant [Arabidopsis thaliana] (TAIR:AT1G65980.1); similar to Os01g0266600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001042680.1); similar to hypothetical protein OsJ_001178 [Oryza sativa (japonica cultivar-group)] (GB:EAZ11353.1); contains InterPro domain Redoxin; (InterPro:IPR013740); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin Range:  from: 1826079    to: 1827867    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g06060.1    Description:  short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G19200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71113.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 1827986    to: 1830206    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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