Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          ----------->RAV1(1)         <---------TOE2(1)                              ===========================RAV         <---------TOE1(1)                        <---------GLK1(2)      ------>ZmHOX2a(1) --------GLK1(1)                                  --------->ARR14(2)     --------->LBD16 ------->DOF2                                 ---------->DOF2           <---------LBD16 ----AGL15                                 --------->TOE2(3)           ----------->RAV1(2) --->AGL15                               --------->ARR11(3)          <-----------GT1      ---------->ID1 ---->AGL1                               <---------ARR11(3)---------->DOF2   <----------DOF2     ----   gaaagccgagtacgagattgcaatgcgatattgaatccaaaggtatcttaaagattcccaacaaagtgatttttcctggcatttttgctcttgtctccat  1792300                                                              ----------->GT1          --------->AtLEC2         --------->TOE2(3)       <---------ZAT2          --------->ANAC46        <---------ANAC55(2)      <---------At4g35610       --------->ANAC58          --------->ANAC58--------->ANAC58                 --------->ZAT2            --------->ANAC58          --------->ANAC58--------->ANAC46            <-----------GT1       <---------bZIP60(2)     <-----------GT1      --------->ANAC58          <---------AHL20(2)    <------ZmHOX2a(1)  ------->TEIL ----->YAB1       --------->ARR11(3)        <----------ID1 --------->At4g35610     ---------->DOF2   cacaatttttccatgcaatacatcttgcacgatatcacctaaattcgcgacaaatttatcgagctggagaaatagaggacatggcaaaagcactgaacct  1792400                                                                                                    <                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                         <---------ANAC55(2)                                                                                         --------->ANAC46                                                                                        <---------LBD16             --------->HSFB2a(2)                                                      <---------ARR14(2)             <---------HSFB2a(2)            ------->TEIL                              --------->ARR14(2)   --------->ANAC58                         --------->ARR14(2)                        --------->GLK1(2)   <------MYB83                             <---------ARR14(2)                    --------->YAB1   <-   <------MYB46(1)            <---------GLK1(1)                           <---------ANAC58      <----   --------->ANAC58           --------->GLK1(1)     --------->YAB1        <---------ANAC58     ------ <-----------RAV1(2)   --------->ALFIN1    <---------CCA1(2)              <---------ANAC46--------->LBD16   ttggcaggtaatgtgctcgaaggaagtgtgagatttccgactagtgtatccctgtaataaaccaagttttccactgtcttgtattcaaaatccgcaacgt  1792500                                                                         --------->CCA1(2)                                                                         <---------GLK1(1)                                                                        --------->ARR11(1)                                                               <---------AHL20(2)         <---------At4g35610                                  --------->ARR11(3)         --------->At4g35610                                  --------->AHL20(1) --------->ARR14(2)                                           <---------AHL20(1)      --------->At4g35610 <---------GLK1(2)                                            <---------ARR11(3)  ----------->RAV1(1) ------ZmHOX2a(1)           ----------->GT1               <---------ZAT6<---------ARR11(3) --------YAB1  --------->At4g35610              --------->TOE2(1)       --------->ARR11(3) -----MYB52(1) --------->GLK1(1)                --------->TOE1(1)       <---------ARR14(2) --->TOE2(3) <---------GLK1(2)               <-----------------AGL1     --------->ARR14(2)    -------   taggattcttgagcagcatctccagcgtaagagtgaaatttagttggacctcgtatggtagtgatatatttgtagatatgccatcaacagttgaagagac  1792600                                                                                    --------->LBD16                                                                                   <---------HSFB2a(2)                                                                                   <---------ANAC46                                                  --------->WRKY18(1)              --------->HSFB2a(2)                                                 <---------RAP2.6(3)         <---------YAB1                                                 <-----------HVH21         --------->YAB1                                           ---------->DOF2           <------ZmHOX2a(1)--------->ARR14(2)                           --------->ZAT6<------ZmHOX2a(2)   <---------------------WRI1                    <<<<<<<<<<MYB80      ===================================HOX2a_HOX2a                  <---------AtMYB61  --------->ANAC58   <---------YAB1  ---------->DOF2         <----            <---------TOE1(2)        --------->ANAC58  <XXXXXXXXXXXXXXXXXXXXXMIR831<---------ANAC55(2) -->CCA1(2) <---------TOE2(2)      <---------AtLEC2  --------->ICU4 <----------ID1<---------LBD16   ggtttgtagtatcggatgttttggtttgaacacttgtgcaaggatcaaagcggtcatgaagattacgaagaggacaaagatgattccggaaactatgcag  1792700                             <---------AHL20(2)                          <---------AHL20(2)        <---------ANAC46  <---------AHL20(1)        <---------ANAC58  --------->AHL20(1)        <---------ANAC58<---------AHL20(1)       <---------DEAR3(2) --------->AHL20(2)                             --------->GLK1(1)    <-----------HVH21   <---------AHL20(2)                   <---------TOE1(3)   <---------ANAC58    --------->YAB1                        <---------TOE2(3)    ---------->DOF2   <---------ANAC58   <---------YAB1     <---------TOE2(3)   --------->MYB59<-------TEIL----------->GT1 -----At4g35610  ----------->GT1<---------ANAC46    <---------AHL20(2)  --------->ARR14(2)      -----   caaatgcgtcgcttggacatggttataatattttatgtggattaagttttgtatgtaaatgtttaggttttacagaaatgcatagaaagatggataaata  1792800                                                                                          <------NtERF2                  <------------CBF                                                        <-------GAMYB                --------->ARR11(3)      ------------>CBF  <-----------GT1              <---------LBD16         --------->ALFIN1       --------->MYB52(1)       <---------AHL20(2)        --------->ICU4         <---------ZAT6--------->At4g35610        --------->WOX13(1)            --------->ICU4      <------ZmHOX2a(1)<---------At4g35610     <-----------HVH21               --------->At5g28300 ----->DOF2 --------->REM1(2)--------->YAB1--------->GLK1(2)<---------YAB1    ----------->GT1   aagaagaaggagtgtgaagacattgagctgttcataacggattacaatctgtcattcattttatcatttatgggttatggcagtaattaggcggatgttt  1792900                                                                                  --------->At4g35610                                                                                  <---------At4g35610                                                                      --------->CCA1(2)                                                                     --------->ARR11(1)                                                                     --------->ARR11(3)                                                                     <---------ARR14(2)     <--------                     <-----------GT1    <---------ZAT6               --------->ARR14(2)     ---------              <------------CBF         <---------YAB1      <---------AHL20(2)  ------>ZmHOX2a(1)            <---------YAB1            <------------CBF    <---------AHL20(2)  <---------ANAC58         <---------YAB1          ------->MYC3             --------->AHL20(2)  --------->TOE2(3)        <------------CBF         <-------MYC3            <---------WOX13(1)   <---------ANAC58   tttttttggttattgttattgttttactttggacacatgttattgttaagtcaaacttgattaatttggcagatatggttccttagctgaatatttattt  1793000                                              <-----------GT1                                          <---------RVE1(1)                                          <---------CCA1(1)                                         <---------GLK1(2)                                         <---------ARR11(3)                                         --------->ARR11(3)                                     ---------->DOF2                                   --------->HSFB2a(2)           <----------DOF2          ------>NtERF2 -AHL20(2)                   <---------AHL20(2)     <----------DOF2      <---------AHL20(2)   ------- >AHL20(2)        ---------->DOF2  <---------HSFB2a(2)          <---------DAG2--------->YAB1---------   ctctcaaaacatagccacttaaaagttttatttttttctaaaagattttttcttctttttcttctaccttttttttatattgatcatatagccacctaaa  1793100                              <----------DOF2                             <---------ANAC58                             <---------ANAC58                      <---------CCA1(1)                             ----------->GT1                      <---------RVE1(1)                     <-------TEIL                     <---------ARR11(3)                    <------ZmHOX2a(2)                     <---------GLK1(2)                    <---------ARR14(2)                     --------->ARR11(3)                   --------->ARR14(2)                   <---------TOE1(3)                      --------->AGP1   --------->YAB1 --->DOF2          <---------TOE2(3)       --------->YAB1--------->At4g35610    --------->ICU4 >AtMYB61      <----------DOF2<---------------AGL15  <-----------HVH21 <---------AHL20(2)       -----   gtttgactcgttgattactttaagattttttgcttttatatgtattcatattccatatcagatccatataagttaaattgtaatgtttttagttcaaatg  1793200  Previous    Next  AGI:  At3g05975.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54200.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63322.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) Range:  from: 1792151    to: 1792720    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version