Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->YAB1                            --------->TOE2(3)                                                      --                          --------->ARR11(3)                                 <---------TOE1(3)     --                         --------->GLK1(1)                            <---------At4g35610          --          <---------ALFIN1<---------ARR11(3)                        <--------P                     --       <-----------GT1   <---------GLK1(1)                 <---------HSFB2a(2)                     -- <----------DOF2         <---------CCA1(2)                 --------->HSFB2a(2) <------ZmHOX2a(1)   -- --->ANAC46        <---------AtLEC2                      ------>ZmHOX2a(1)   <---------TOE2(3)   <---   caactttcttcaccactctcttcatggatatcttaatcttctctgtgaaactctgtttcctcgagaattggtagctcttaaggaatagttgtctcttctc  1776400                                                                  <---------At4g35610                                                               <---------At4g35610                                                               --------->At4g35610         ------>ZmHOX2a(1)                                     <---------ZAT2      ------>ZmHOX2a(1)                                       <-----------RAV1(1)  ------->TEIL--------->ARR14(2)                             <---------RAP2.6(2)  <---------ARR14(2)                                      <---------MYB52(1)  --------->ARR14(2)                                 --------->ANAC46                     <------ZmHOX2a(1) <---------CCA1(2)                   <---------YAB1  ------->GAMYB--------->At4g35610   --------->MYB59 ------->ANAC58                <------------MYB.PH3(1)   <-------GAMYB           --------->ANAC46 ------->ANAC55(2)             <------------AtMYB77  --------->ANAC58           --------->HSFB2a(2) ------->ANAC58              ------------>MYB.PH3(1) --------->ANAC58           <---------LBD16 ------->ANAC46              <-----------GT1       <---------ALFIN1             --------->LBD16 ------->ANAC55(1)        --------->YAB1       ------>NtERF2<---------At4g35610 ------>ZmHOX2a(1) ------->O2   <---------ARR14(2)  <---------MYB52(1)--------->MYB46(3)     <---------At4g35610    --- ------ALFIN1<---------CCA1(2)<---------At5g28300  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --------->ICU4-   cacgtatcctcctccatatccatagctatagtaaccgttactattgctctgccaaacgccgttgctgctgctgtttctgctcctcggaattaggaattga  1776500                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                     <---------ANAC58        <----------DOF2                      <--                                     <---------ANAC58       <---------ANAC58                      ---                               <---------TOE2(3)            <---------ANAC58                      ---                           >>>>>>>>>GATA-2                  <---------ANAC46                      <--                           >>>>>>>>>GATA-4            ----------->HVH21                           ---                           >>>>>>>>>GATA-3        <---------LBD16                                ----                           >>>>>>>>>GATA-1     --------->ARR14(2)                                ----   ---------->DOF2      --------->ALFIN1       <---------ARR14(2)  <------MYB83                  ---- ------->DOF2       --------->DAG2--------->GLK1(1)  <-----------HVH21     ----------->GT1      <---- ---------->GT1   ---------->DOF2 <---------GLK1(1) --------->LBD16<------MYB46(1)--------->ZAT6-----   gaaagtaaagaattgtgttcaaaagggtggattgagatttcttgcactggattccggtgatggcttatttggttaacttgtaaaacactaaaacacttag  1776600          <---------ARR14(2)          --------->ARR14(2)      <------NtERF2     ------>NtERF2     --------->LBD16    --------->RRTF1(3)    --------->RAP2.3(2)    --------->RRTF1(2)    --------->RAP2.6(2)    --------->ATERF1(2)    <---------ATERF1(2)    --------->DREB2C(2)    --------->RAP2.3(3)    --------->ANAC46    --------->DEAR3(1)   --------->ERF1   --------->DEAR4(2)   --------->RRTF1(1)   --------->RAP2.3(1)   <------NtERF2   --------->ATERF1(1)   --------->ORA47(2)   --------->RAP2.6(1)  <---------At4g35610  <---------RAP2.3(1)  --------->ABI4(1)  <---------DREB2C(1)  ------>NtERF2  <---------DEAR4(2)  <---------ATERF1(1)  --------->At4g35610 --------->RAP2.3(2) --------->RRTF1(3) --------->RAP2.3(3) --------->RAP2.6(2) <---------ALFIN1 <---------DEAR3(1) --------->DEAR3(1) <---------ATERF1(2) --------->ANAC46 --------->ATERF1(2) --------->RRTF1(2) -------->ERF1 -------->DEAR4(2) -------->RRTF1(1) -------->RAP2.6(1) ------NtERF2 -------->ATERF1(1) -------->ORA47(2) -------->RAP2.3(1) --------DREB2C(1) --------RAP2.3(1) --------DEAR4(2) --------ATERF1(1) ------->DREB2C(1) ---->NtERF2  --------->LBD16                           <---------ARR11(3) ------->At4g35610                                      --------->ARR11(3) -------ATERF1(2)                                      <---------CCA1(2)                           -- ------>ANAC46------>NtERF2                       <------MYB83                                     <- ------>DEAR3(1)                                  <------MYB46(1)                                  -- -------DEAR3(1)                                <--------P                                         <- ------>RAP2.6(2)                              <-------GAMYB                                      <-- ----->ATERF1(1)                              <------MYB83--------->TOE2(3)                 <-------- ----->MYB46(3)         --------->REM1(1)     <------MYB46(1)                              <---------ANAC58 ----->ERF1  --------->ANAC46                 <---------MYB46(3)                           <---------ANAC58 -----At4g35610     --------->At4g35610      <---------AtMYB61  --------->YAB1             <---------ANAC46 ---->At4g35610 --------->DEAR3(1)           --------->MYB59   <---------ATHB12<----------DOF2-------   ccgccgccgccaaatccgccgtagctacaacgaatagggtttttggtttggttggatatatctcaatcgtgttttcaagtgcttcacgttgttgctttaa  1776700                            <---------SPL7              <----------DOF2             <---------ANAC58        <---------ANAC58   <---------ANAC58        <---------ANAC58   --------->ANAC55(2)  <-----------GT1          <---------ANAC58 ------->AHL20(1)         --------------->AtSPL8 --------AHL20(1)         <---------TOE2(3) ------->ARR11(3)         --------------->AtSPL3                                      --------->DAG2 --------ARR11(3)    <----------DOF2            --------------->AGL15             --------->AHL20(2) -------AHL20(2)    <---------DAG2             <-----------------AGL3            *TSS---------->DOF2 --DOF2 <---------ANAC46  <---------------AtSPL3<----------DOF2  <----------DOF2--------->YAB1 -->AHL20(2) <---------ANAC58    --------->ZAT14<---------------AGL15     <-----------GT1       <----   atattttctggcttggcttttgccttttgacgtactactctctctctctgcttttaatggagtctctcttttttttttactaaaataaaaagtggtctcg  1776800                                                             <------------CBF               <---------ARR11(3)                         ------------>CBF                       <---               --------->ARR11(3)               --------->ANAC58                        <----------DOF2   --------->AHL20(2)       <----------DOF2     ----------->GT1       ------------>CBF<---------At4g35610 -------HVH21 <---------CCA1(2)                 --------->ANAC58 ---------->DOF2  --------->ARR14(2)   tcaaatcaaatacactatatctaggtgagactttaatctaacttcccaacaagtaaaaatatcaattgaaagttcaatgttcacgttctgcttataggca  1776900                                     <---------ANAC58                                     --------->ANAC55(2)                                     <---------ANAC55(2)                                     --------->bZIP60(1)                                     <---------TGA2(1)                                     --------->TGA2(1)                                     <---------bZIP60(1)                              <---------ANAC55(2)                              <---------ANAC55(1)                              <---------ANAC58                              <---------ANAC58                              --------->ANAC55(2)                              <---------ANAC46                             <---------TOE2(3)                            <-----------GT1                        --------->AHL20(1)                        <---------AHL20(1)  --------->ANAC55(1)                    --------->ANAC58                        <---------AHL20(2)  --------->ANAC55(2)                    --------->ANAC58                        --------->AHL20(2)  --------->ANAC58              <---------YAB1                      <---------AHL20(2)    <---------ANAC55(2)           <---------AHL20(2)                      <---------AHL20(1)    --------->ANAC58             <---------AHL20(2)                     --------->YAB1 ----------->STF1                     --------->AHL20(2)                    <---------YAB1 <---------TGA2(2)                     --------->AHL20(1)                   <---------AHL20(2)<---------ANAC58                    <---------AHL20(1)                   --------->AHL20(2)<---------ANAC46                   --------->YAB1                  --------->YAB1  ----------->TGA1                  <---------AHL20(2) ------YAB1      <---------YAB1   ----------->HVH21                 --------->AHL20(2)    <----------   tgataaactaatttgtaagattataatattttacgtatgacgtaagacgtaagacggtttttgttttcattttaatataatggactagcaattttcagtc  1777000                                                        <---------ARR11(3)                                                        --------->ARR11(3)                                                       --------->YAB1                                                      <---------YAB1                                                    <---------ICU4                                                 --------->bZIP60(1)                                                 <---------bZIP60(1)                                                 <---------TGA2(1)                                              ----------->HVH21                                             <---------WOX13(1)                     <---------AHL20(2)                                            <---------ANAC58                        --------->AHL20(2)                                <---------AHL20(2) --------->ICU4               <---------YAB1                    --------->GLK1(2)       <---------ANAC46                  --------->YAB1 -GT1   <---------YAB1    ------->TEIL      <---------ANAC58                 <---------YAB1   tgaattttgtatgattttcaagaatatgaatttttaaaatgatgttgagtgacataatgatattgacatttttgaaacgatgataattttttggtttatt  1777100                                            --------->ANAC55(2)                                            <---------ANAC55(2)                                            <---------ANAC58                                            <---------ANAC58                                            <---------ANAC46                                       ------>MYB83  ----------->RAV1(1)                                     --------------->AGL15                                     <---------MYB59<----------ID1                                     <---------------AGL15                                    <-----------------AGL1                                    ----------------->AG                                    ----------------->AGL1                          <---------AHL20(2)           <---------ANAC58       <-----------GT1   --------->ANAC58                --------->AHL20(2)           <---------ANAC46   <---------AHL20(2)    --------->ANAC46         --------->ANAC46           <---------ANAC58   --------->AHL20(2)    --------->ANAC58       --------->ANAC46      <-----------RAV1(1)    --------->AHL20(2) --------->ANAC58           --------->ZAT6    <----------DOF2          <---------AHL20(2) --------->ANAC58        <---------ARR14(2) <---------YAB1      <---------TOE1(2) ------>MYB46(1)   ---------->DOF2--------->ARR14(2)        <--   gttatgctttgttgctggggtcttgggtttattaatttaccaaattgcgtaagcacgacaaaagaattttagtgtatacactacaattaattcaatgttt  1777200                                                                            <---------At4g35610                                                                            --------->At4g35610                                                                          --------->MYB46(3)                                                                         ---------->DOF2                                                                        --------->MYB52(1)                          <---------YAB1                     <------ZmHOX2a(1)                      --------->AHL20(1)                    <---------At4g35610                    <---------AHL20(1)             --------->ANAC46   <---------MYB59    <---------ICU4  --------->AHL20(1)    ---------->DOF2   --------->At4g35610                 ----- -------AtLEC2     --------->YAB1       ----------->HVH21 <-----------RAV1(2)       <---------ALFIN1   gcataaatatcacacaaacaaaaatattatgttattcgaggtctgaaaggaacacgagaggcaggagactagcctaacagctccaaacacttcaatacac  1777300  Previous    Next  AGI:  At3g05937.1    Description:  unknown protein Range:  from: 1775908    to: 1776781    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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