Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->ATHB12                                       <---------AHL20(2)                                       <---------YAB1                                    --------->AHL20(1)                                    --------->ARR11(3)                                    --------->AHL20(2)                        <---------WRKY18(1)  --                                    <---------AHL20(1)                ------->TEIL                 <-                                    <---------ARR11(3)                <---------TOE1(2)           <--  <---------AtLEC2                  <---------AHL20(2)               <-----------GT1           <----- --->ATHB51                    <---------YAB1                     <---------------AtSPL8       ------ ---YAB1                    <---------AHL20(2)                    --------------->AtSPL8      <------ -->ICU4       <---------AHL20(2) ------->TEIL                    <---------------AtSPL3   <---------AHL20(2)   ttgtggatggaatttgtttaatcttgaaaatttatgaatatattattgagtcccatattctatctaattttgtacgttcttgaccccaaatgtttattta  1769900      <---------YAB1   <---------AHL20(2)             <-------TEIL   --------->AHL20(2)      --------->AtLEC2 ------->AHL20(2)          --------->ANAC58 --------AHL20(2)          --------->ANAC58                                                         < -------AHL20(2)       --------->ARR11(3)                       <---------TOE1(3)       --------->LBD16 ----AHL20(2)         --------->YAB1                            <---------TOE2(3)     <---------LBD16 --->AHL20(2)        <---------YAB1       ----------->GT1   <----------DOF2    <-----------GT1      - ---AHL20(2)         --------->ICU4<---------AtLEC2   --------->ANAC46<---------AtMYB61--------->LBD16   tttattttaatattgtatatgttatgatcatgcaaatgcatggatagagaaattccaagccggtttaaggttttggttttatttctatcccggtttggat  1770000                                                         <---------ICU4                                                         --------->ATHB12                                                         --------->YAB1                                                        <---------ATHB12                                                      --------->WOX13(1)                                                   --------->TOE2(3)                                                  --------->YAB1             <---------YAB1                                                <---------ARR11(3)         --------->ATHB12                                            --------->TOE2(3)              <---------ICU4                                            ------->GAMYB<--------HAHB4   --------->ICU4           <---------MYB52(2)               --------->YAB1                <---------YAB1         ------>MYB83                   --------->MYB46(3)           <------MYB46(1)         ------>MYB46(1)             --------->ZAT14<---------YAB1   ----------->GT1       <---------MYB59     <----------DOF2 --------->MYB46(3)        <------MYB83 ---------At4g35610     --------->ARR11(3)--------->ANAC58          --------->MYB111(2) -------->At4g35610     <---------ARR11(3)--------->ANAC58          --------->MYB46(2)   ttagctgaaccaaacaaacctcttgagttctttcaccagtaaacaaccaaaatcatcaatcatttcgagtttggtgattattagagtttgaaggtgtttt  1770100                                                                                         --------->YAB1                                                                                      ------->GAMYB                                                                                    ------>MYB46(1)                                                                                    ------>MYB83                                                                                   --------->MYB52(1)                                                                                  --------->TOE1(2)                                                                                  --------->TOE2(2)                                                                                  ------->GAMYB                                                                                 <---------MYB52(2)                                             ----------->RAV1(1)                 --------->MYB46(3)                 ------>ZmHOX2a(1)   <---------TOE2(3)                   ------>MYB46(1)<------ZmHOX2a(2)       <---------ANAC58            --------->AHL20(2)                    ------>MYB83--------->MYB46(3)       <---------ANAC58            <---------AHL20(2)       <----------DOF2    <-----------GT1   ----   tgttatggtgagtgtcatcctataaactataggctaattaatgtgtccaacaaaacaaaactctttttaaacaccaaattttaaccaacgatcagaacac  1770200        --------->YAB1        <---------ICU4        -------->HAHB4       <---------ATHB51       --------->ICU4     ------>MYB46(1)     ------>MYB83                                   --------->YAB1    <---------------AGL15                           <--------HAHB4               ----------->GT1    --------------->AGL15                           <---------ICU4               <---------MYB46(3)   --------->TOE2(3)                                --------->ATHB51           <---------MYB52(1)   ----------------->AGL3                          --------->ICU4   <---------MYB52(1)       <-------   <---------MYB59                          <---------ALFIN1       <------------CBF    --------->ARR11(3)   <-----------------AGL2                --------->PCF2           --------->ATHB12     <---------ARR11(3)   <-----------------AGL3                --------->PCF5<---------ICU4         <------------CBF   <--- ----->AtMYB61              <-----------GT1<------NtERF2<-----------GT1 <<<<<<<<<MYB2----------->ARR10   ctaaacctaattatggcaaaattttaaaattaacacatctatggcccctctccataattatctcttctccattggttttccattggttaaatcttcttta  1770300                                                                                     <---------HSFC1(2)                                                                           <<<<<<<<<<<<<<<<<LFY       --------->AHL20(2)                                                 --------->YAB1       <---------AHL20(2)                                                <---------ATHB12   --------->CCA1(2)       <---------TOE2(3)                           --------->WOX13(1)  --------->ARR11(3)   --------->TOE2(3)                              --------->MYB46(3)  <---------ARR11(3)   --------->YAB1                         --------->ANAC46       --------->HSFC1(2) ---DOF2  <------------CBF---------->DOF2             --------->ARR11(3)--------->ANAC58        ----- ------ANAC46     ------------>CBF         *TSS       <---------ARR11(3)--------->ANAC58      <------   cgtagatatataaattgagaaacaatgttaaagtattttctcaaactcatcaataacatcttacaaacaacaacaatcaacaatggcaacttccatgatc  1770400                                       <---------ATERF1(1)                                       <---------ALFIN1                                <---------TGA1a                                --------->PIF3(3)                                --------->O2                                <---------O2                                --------->TGA1a                                =============================================bZIP_DOF                              <---------ALFIN1                             --------->DEAR3(1)                             --------->RAP2.3(3)                            <------NtERF2                            <----------------PIF3(2)                           ------>NtERF2                           <---------ATERF1(1)                           <------NtERF2                                               --------->MYB52(1)                          --------->RAP2.6(2)                                   --------->GLK1(1)                          --------->DEAR3(1)                                   <-----------ARR10                         --------->RAP2.3(1)                                   <---------ARR11(3)                         --------->ATERF1(1)                                   --------->ARR11(3)      <-----------HVH21  XXXXXXXXXXXXXXXXXXXX>MIR774   <---------YAB1       <---------ANAC58      <-----------TGA1   <---------RAP2.6(2)        --------->ARR14(2)      <---------ANAC58 <-------     --------->ANAC46   <---------ATERF1(1)         <---------ARR14(2)     <---------At4g35610 ->ZmHOX2a(2)        ------->PIF5<-------MYC3 <---------ARR14(2)       <-----------RAV1(1)------->GAMYB ---ARR11(3)         <-------PIF5------->MYC3 --------->ARR14(2)  <----------DOF2------>ZmHOX2a(2)   cctatattcgtcaccttcatgctcgtggccgcccacatggccctcgccgatacaaatatgcttcaagacttttgtgttgctgatctctccaacggtatca  1770500                                                              --------->ANAC58                                                              --------->ANAC58                                                     --------->MYB52(1)                                                    <---------ZAT14                                                 ----------->GT1                                              --------->CCA1(2)                                             --------->ARR14(2)                                             --------->ARR11(3)         ---------->ID1                                             <---------ARR11(3)       <---------AtMYB61                                             XXXXXXXXXXXXXXXXXXXX>MIR864-5P                                          <---------------AGL15     <----------DOF2                                          --------------->AGL15   --------->At4g35610                                         ----------------->AGL2   <---------ZAT2       ------->GAMYB                         <---------ANAC58<-----------------AGL2   --------->ZAT2      --------->MYB46(3)                         <---------ANAC58----------------->AGL3   <---------At4g35610--------->ANAC58                        <---------At4g35610  <---------ARR14(2)  ------->TEIL        --------->ANAC58 ----HVH21             <---------YAB1  <-----------GT1        --------->ANAC46     --------->MYB46(3)   catctctctctataccatttatgttctgcttgcatttacatttaccagatatagttaactgcaaacgcagctttggtgttttgaaacaaccaagaccaat  1770600                                                       <---------GLK1(1)                                                  <---------At4g35610                                                 --------->MYB52(1)                 <----------DOF2                <---------WRKY38(1)                 <---------DAG2                 <---------WRKY45          <---------MYB46(3)         <------MYB83<---------DOF5.7(2)       <-----------RAV1(1)           <------MYB46(1)   --------->GLK1(1)     --------->DAG2   --------->ARR11(3)               --------->MYB59   --------->ARR14(2)    ---------->DOF2   <---------ARR11(3)          <---------YAB1   <---------WRKY12        --------->ANAC58   <---------AHL20(1)   --------->YAB1     ---------->DOF2      ---------->DOF2    --------->ZAT6   --------->AHL20(1)<-----------GT1<---------TOE2(3) <---------ARR14(2)--------->ANAC58   tccaatattttgttgttgactttttatcatgttctgattaggtttgaaagtcaacggatacccttgcaaagacccagcaaaagtaacaccagaagacttc  1770700                            --------->MYB46(3)                  --------->MYB46(3)                          ----------->RAV1(1)                   --------->ATERF1(1)                          <---------ALFIN1                      --------->DEAR3(2)                         --------->MYB46(3)                  <------ZmHOX2a(1)                        ------>NtERF2                     <-----------RAV1(2)                     --------->At4g35610              <-----------HVH21                     <---------At4g35610             <---------MYB46(3)          <---------ANAC58                  <---------ZAT2                   --------->ZAT2                ----------->RAV1(2)                  <---------At4g35610              <---------ZAT2 --------->MYB52(1)    <------NtERF2                  --------->ZAT2                   --------->At4g35610           <---------ANAC58                  --------->At4g35610              <---------At4g35610      --------->DAG2  <--------                 <-----------RAV1(1)             <-----------RAV1(2)       ---------->DOF2 --------->ZAT14   tacttcataggcttagccactgctgcagccacagccaactcttcaatgggctcagctgttacaggagccaacgttgagaaagtgcctggcctcaacactc  1770800  Previous    Next  AGI:  At3g05930.1    Description:  GLP8 (GERMIN-LIKE PROTEIN 8); manganese ion binding / metal ion binding / nutrient reservoir. Identical to Germin-like protein subfamily 2 member 3 precursor (GLP8) [Arabidopsis Thaliana] (GB:P93000); similar to germin-like protein, putative [Arabidopsis thaliana] (TAIR:AT5G26700.1); similar to germin-like protein 2 [Vitis vinifera] (GB:ABH09468.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Germin; (InterPro:IPR001929); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051) Range:  from: 1770343    to: 1771415    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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