Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->AtMYB61                                                        ------>NtERF2                                                     <---------RAP2.6(3)                                                     <---------ATERF1(1)                                                     <---------DDF1                                                     ------>NtERF2                                                    --------->RAP2.6(2)                                                    ----------->HVH21                                                    <---------ETT(2)                                                    <---------ETT(1)                                                    --------->DREB2C(2)                                                    --------->At1g77200                                                   --------->DEAR3(2)                                                   --------->SPL7                                                  ------>NtERF2       <-----------GT1                           ------>NtERF2   <---------AHL20(2)                     --------->AHL20(1) --------->ANAC58 ---------->GT1                           --------->ARR11(3) --------->ANAC58 -->ATHB1                                 <---------ARR11(3)------>MYB46(1) ----ICU4                                 <---------AHL20(1)------>MYB83 --->ATHB51                 --------->AHL20(2)  <---------RAP2.6(2)                                <- --->ATHB12               --------->TOE2(3)    <---------LBD16                             --------->ANAC46 ---YAB1          <-----------GT1      --------->AHL20(2) --------->DEAR3(1)          --------->bZIP60(1) -->ICU4      <----------DOF2      <---------ZAT6--------->LBD16                      --------->ANAC46   ttgagttaattactctcttttttcaaaacattatttagtgataaaatattccggccgacaccaacgcataaaccgtggcattgaattgacaccacaaaac  1760500                                                                                      <---------ANAC58            --------------->AGL15                                                     <---------ANAC58            <---------DAG2       ---------->DOF2         ----------->GT1          <---------ANAC58            <----------DOF2    <---------ATHB12     <---------AHL20(2)       <-----------RAV1(1)         <-----------GT1    ------>ZmHOX2a(1)   <----------DOF2--------->AHL20(2) <---------ANAC58 --------YAB1 --------->AHL20(2)--------->YAB1  ------>ZmHOX2a(1)       ----------->GT1<----------DOF2   tattaatagatttactttatatatgaagtcctaatcaaagttgtaatgtcctttttattttgttataaaataagtggtaatgtcgcttgctttaatctat  1760600                                                    <---------AHL20(2)                                                 --------->TOE2(3)                                               --------->ARR11(3)                                               <---------ARR11(3)                   <---------ANAC58                                               --------->AHL20(1)                   <---------ANAC58                                               <---------AHL20(1)          <---------MYB52(1)    <---                                              --------->RVE1(1)           <----------DOF2  <---------ARR14(2)                   <-----------HVH21          --------->CCA1(1)          --------->TOE2(3) --------->ARR14(2)         ------>ZmHOX2a(1)               <----------DOF2        --------->GLK1(2)   <---------ANAC46   tagttcttatcctttcgaattggtcacttctattcaaacttgactttaatatcttaaattttcaagaatttgtttcctttattttggtgtgcaaattcgc  1760700                                                           <<<<<<<<<<<<<<<<<LFY                                                           ------>NtERF2                                                           <---------DDF1                                                           <---------RAP2.6(3)                                                          >>>>>>>>>>AtTINY2                                                          --------->RAP2.6(2)                                                          --------->At1g77200                                                          <---------ETT(2)                          <                                                          <---------ETT(1)                        ---                                                         --------->DEAR3(2)               <---------TOE1(3)                   ----------->GT1                      ------>MYB83                      <---------TOE2(3)          <---------YAB1                                ------>MYB46(1)                  ---------->DOF2   ----------->GT1 --------->ANAC58                  ----------->RAV1(2)              <----------DOF2 ------TOE1(2)     --------->ANAC58 xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)        <-----------GT1    <---   tggtattgaaatattgttgacaagaaaaactttgcaaaaaaaaaaaaaaaaaaaaacctgccgacattggtcttagcatttatccattctttaaagtttt  1760800                                                                                    ------->GAMYB                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                   --------->ANAC55(2)                                                                                   <---------ANAC55(2)                                                                                 --------->MYB52(1)                                                                                 <-----------GT1           --------->At4g35610                     ---------->DOF2  <------ZmHOX2a(2)           <---------At4g35610              <------ZmHOX2a(2)      --------->ARR11(3) ---------WOX13(1)                        =================================HOX2a_HOX2a ------>ATHB12                            <------ZmHOX2a(1)        <---------ARR11(3)   ----------->GT1 ------YAB1----------->RAV1(2)        ---------->DOF2    ----------->GT1   --------->ANAC46   tgattggaattacatctgagcccattacaggcccattttcaaaaggatcacttcaaagcgggtttattagatcatctacgatataacggaacgtgaaact  1760900                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                           --------->DREB2C(2)                                                                           ------->GAMYB                                                                           --------->RAP2.6(2)                                                                    <---------ARR14(2)             --                                                               --------->ANAC58                  <---                                                               <---------ANAC55(2)   <-----------HVH21                                                               --------->ANAC46     --------->ANAC46                                                               --------->ANAC58     --------->O2 ----                                                      --------->At4g35610 --------->MYB46(3)     ----             <---------YAB1              ---------->DOF2       --------->ANAC55(1)  <---------O2<----           *TSS   <-----------GT1  ------>ZmHOX2a(1)--------->YAB1  --------->ARR14(2)        ------>ZmHOX2a(1)   gacataaactaggttttgattttccctccaaaacatcctcatggaaagttggaatcatcttactcacgcaaattcgaccgccatagacgtcaattcctgt  1761000                               --------->ANAC58                  ----------->GT1                               --------->ANAC46                  <------MYB46(1)      <---------HSFC1(2)       --------->ANAC58       <---------TOE1(3)      --------->HSFC1(2)   <---------WRKY18(1)        <---------TOE2(3)      --------->HSFB2a(1) --------->WRKY38(1)        <-----------GT1      <---------HSFB2a(1) ----------->HVH21          <---------DOF5.7(2)     ----------->ARR10    --------->WRKY12         --------->DOF5.7(2)     <-----------ARR10 ------>ZmHOX2a(1)          <----------DOF2<------MYB83 ------->TOE1(2)  <----------DOF2               ------->TEIL   <---------WOX13(1)            -------- ------ARR14(2)  <---------HSFC1(2)         --------------->AtSPL8                        <---------ANAC46 ----->ARR14(2)  --------->HSFC1(2)      <----------DOF2     --------->ATHB12       <-------TEIL --->TEIL        --------->HSFB2a(1)<---------HSFB2a(1)     <---------YAB1       --------->At4g35610 -----CCA1(2)    <---------HSFB2a(1)--------->HSFB2a(1) --------->ATHB12   <---------ANAC46<---------LBD16   atctgcgaagcttctcagaactttcctgttgacccgaaaccttctttatgtactttaacgatttgattggtgaaattgtgggaagatgcattgtgcggag  1761100                                              <---------YAB1                                           --------->GLK1(2)                                        --------->DAG2                           --------->YAB1                                      ---------->DOF2                      <---------ANAC58                                --------->MYB52(1)                         <---------ANAC46                               ------>ZmHOX2a(1)                        <--------P                            --------------->AGL15                    <---------YAB1 --------->ALFIN1           <---------------AGL15        --------->GLK1(1) <---------ANAC58        <- ->LBD16         ---------->DOF2---------->DOF2 <---------GLK1(2)  --------->CCA1(2)         --------   aaggtgtttgatgaaattccaaagagaaaactcctaaaggaaaaggttctgattctgagatttcaaatgatatggttgcttattcatgaaatgtaatgct  1761200                                                    --------->GLK1(2)                        <-------                                                    <---------ARR11(3)                      ---------                                                    --------->ARR14(2)                      ---------                                                    <---------ARR14(2)                 --------->ANAC46               ----------->GT1                      --------->ARR11(3)                 --------->ANAC58          --------->TOE2(3)         --------->TOE2(3)                                  --------->ANAC58          ------->GAMYB             --------->YAB1  <---------ARR11(1)               ----------->RAV1(1)    --------->YAB1                 <-------TEIL     <-----------ARR10                --------->AtMYB61  <---------WOX13(1)   <-----------GT1   --------->ZAT6                           --------->ANAC46 --------YAB1---------->DOF2  --------->ANAC46     <---------CCA1(2)              <-----------GT1 ->ICU4   --------->TOE1(3)  ------->GAMYB  ---------->DOF2            --------->CCA1(2)  ---------->DOF2   gatgaatgataaccgtaaagaaaattttcaacacacatccataacacaaaggcaaatctttgtatgtttacagatataagttataaaccacacaaagcca  1761300                 --------->KAN4(2)                <---------HSFB2a(1)                         ------>MYB83                --------->HSFB2a(1)                         ------>MYB46(1)                <---------HSFC1(2)                       --------->MYB46(3)                <---------KAN4(1)                 --------->ANAC58                --------->KAN4(1)                 --------->ANAC58           --------->MYB52(1)                --------->HSFC1(2)             --------->ANAC46             --------->RVE1(1)    ---------->DOF2                            --------->ANAC58         --------->AHL20(2) --------------WRI1                            --------->ANAC58        --------->YAB1  --------->TOE2(3) >ANAC58       <---------KAN4(2)           <---------ALFIN1----------->RAV1(1) --------->TOE1(3) >ANAC58  ---------->DOF2                  ----------->RAV1(1)    --------->AHL20(2)   --------->TOE1(3)   taaaaacaaagaaaaagaatgttcttgttttttttttgttttctcccacacgaagcaaaaccaacaaattgaataaaaatacctgaaaactttaaacttg  1761400  Previous    Next  AGI:  At3g05905.1    Description:  other RNA Range:  from: 1760911    to: 1764218    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g05900.1    Description:  neurofilament protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G22795.1); similar to erythrocyte binding protein, putative [Trichomonas vaginalis G3] (GB:XP_001315918.1); contains domain YK14_CAEEL_P34338; (PD041151) Range:  from: 1761211    to: 1763990    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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