Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                         <---------AtLEC2                                                                                         <---------ANAC58                                           <---------------AGL15                         <---------ANAC58                                          ----------------->AGL2                         <---------ANAC46                                          ----------------->AGL3          XXXXXXXXXXXXXXXXXXXXX>MIR777                            <----------DOF2--------------->AGL15    <---------ICU4      <---------MYB46(3) ---------KAN4(2)     <---------LBD16  <---------SPL7              <---------YAB1    <-------GAMYB -----TOE2(3) ------>ZmHOX2a(2)      --------------->AtSPL8        --------->ICU4   <---------ANAC58 ---->MYB59 --------->ARR11(3)       <---------------AtSPL8 --------->ARR11(3)      <---------ANAC58< -AHL20(2)  <---------ARR11(3)       --------->ALFIN1    <---------ICU4<-----------GT1<---------MYB52(1)   ggtatgttcttgttgatcttgtttttcggactttgtaatgtggtaccagttttagataattagttcttgataattacgctcaaattccgttgcttggcac  1753600                      <---------YAB1              <------MYB83              <------MYB46(1)             --------->MYB59             --------->MYB52(2)             <---------MYB46(3)             --------->MYB46(2)            --------->SPL7            <---------MYB55(1)                               --------->ZAT18          <---------SPL7                                     --------->ZAT14         <---------ANAC58                                  <---------GLK1(1)         <---------ANAC58 ------>ZmHOX2a(2)    <---------YAB1<---------ZAT14 --------->AHL20(2) --------->YAB1             <---------ATHB12 ----->ICU4<---------MYB52(1)                <---------At4g35610 ---------WOX13(1) --------->ICU4     <---------YAB1 <---------ANAC46------>ZmHOX2a(2)        <------   tgatttattctgcgttcggtactgatgatcgttcttcattctcattccgatgattctgtggagttcactgatctaagtttgattttggcataccagttgt  1753700                                                                                  --------->TOE2(3)                                                                        <---------AHL20(2)                                                                    <---------CCA1(1)                                                                    <---------RVE1(1)          ----------->HVH21                                        <---------ARR11(3) <---------TOE2(3)         <---------------AGL15                                     --------->ARR11(3) <---------TOE1(3)         --------------->AGL15                                   <---------YAB1   --------->TOE1(3)        ----------------->AGL1                                <XXXXXXXXXXXXXXXXXXXXMIR400  --------->AHL20(2)                                      <---------AtMYB61<-----------GT1     <----- ---MYB46(3)---------->DOF2    ----------->GT1     <----------DOF2--------->YAB1  --------->YAB1   tcgattaaatgcctgaaagagaaaacattcaattcgtaaatttcatattttgtctttgttttggtttatgatatttttatctaatcttaaggcttaactt  1753800                 --------->ALFIN1                 <-----------RAV1(1)               <---------ANAC58               <---------ANAC55(2)               <---------ANAC58       <---------ANAC46    --------->ANAC55(2)    <---------ANAC55(2)   <-------TEIL--------->ANAC55(2)                                                               ---- <---------ARR14(2)                                          <----------DOF2                    ----- --------->ARR14(2)           ----------->GT1          <---------ZAT14                        <------ -----DOF2     <---------ANAC55(1)                     --------->ZAT14             <-----------GT1   tcaaatacgtcttgtatacgtgttgcacagaagagttataccttgagtttttgtttgtgtagtcttttgttagtagtctctaattttacgagtctgtaac  1753900                                                                                        ------>ZmHOX2a(1)                                                                                        <----------DOF2                                                                                    <---------ARR11(1)                                                                                    --------->ARR14(2)                                                                                    <---------ARR14(2)                                                                                   <---------CCA1(2)                                                                                   <---------ARR14(1)                                                                                 <---------ANAC55(2)                                                                                 <---------ANAC58                                                                                 <---------ANAC55(1)                                                                                 <---------ANAC46                                                                             ------>ZmHOX2a(2)                                                                             ==================HOX2a_HOX2a                                                                            ===================HOX2a_HOX2a                                                                            <------ZmHOX2a(2)                                                                           <---------AGP1                                                                           --------->AGP1  <---------MYB46(3)                                                                           <---------ARR14(2)                                                                   *TSS    <---------ARR14(3)                                                           --------->ANAC58--------->ARR14(2)                                                           --------->ANAC58<-----------ARR10                                                         <------ZmHOX2a(1) --------->ARR14(3)                                                         ===========================HOX2a_HOX2a                                                         ==========================HOX2a_HOX2a                                                      ==============================HOX2a_HOX2a                                           <---------AHL20(2)   <---------YAB1   --------->ANAC55(2)                                    <---------TOE1(3) <------ZmHOX2a(1)    <---------ARR11(3)   <---- <----------DOF2                    <---------TOE2(3) =============================HOX2a_HOX2a  <---- --->GAMYB                      <---------WOX13(1) <---------HSFB2a(2)     --------->ARR11(3)-------- ---->MYB46(3)                 <------------CBF    <---------LBD16---------->DOF2<---------ANAC58  -- -----GT1                     --------->ATHB12     <-----------RAV1(2)   ----------->ARR10 <---------   catctttaggcttataacagggtttttgaaactgattgaaggtttttatttatccaggaggaagctatgaaagtcaagatcttgcgtatccttttgttgc  1754000                                                                                                -----                                                            <------ZmHOX2a(1)            --------->YAB1 <---------CCA1(2)                        --------->ANAC55(2)                           <---------YAB1 -----ANAC58                         <------MYB83         <---------TOE1(2)           --------->YAB1 -----ANAC58              ----------->GT1 <---------ANAC55(2)  <----------DOF2       <---------YAB1 -->ID1      <----------DOF2         <------MYB46(1)      --------->LBD16     --------->At4g35610 ------->REM1(1)   <---------LBD16  --------->MYB59<---------ATHB12<XXXXXXXXXXXXXXXXXXXXMIR827  <---- --RAV1(1)   <---------DAG2         <---------TOE2(3)    <---------LBD16      <---------At4g35610   ttcatctcttcttagcttttttgggggaaagtttatattaggttaagtgataaatcatcccaggacttttgatggtgatcatctgatatgataataaaca  1754100                                                                <---------DAG2                                                             <-----------GT1                                                         <---------YAB1                  <---------AHL20(2)             <---------ANAC46                          --------->YAB1      <<<<<<<<<<<<<<<<<LFY             <---------ANAC58                     <---------YAB1<----------DOF2<---------MYB52(1)             <---------ANAC58        <---------GLK1(2)<-------TEIL     ------->TEIL     --------->AHL20(2) ---->ARR11(3)          <----------DOF2     --------->ZAT2<---------ICU4   >>>>>>>>>>>>>>>>>LFY -----ARR11(3)          <---------DAG2      <---------ZAT2--------->YAB1<---------At4g35610   tcttaagtctgtttatcgtgtattagctttaccgagttagattcccagcttgatgattcataataactttttgcatcttccattggtttatttaatagac  1754200                                              ----------->GT1                                     ------------------------>ANAC81                            <-----------RAV1(1)              <---------ANAC58       --------->ANAC58--------->ANAC58                             ---              <---------ANAC58       --------->ANAC58--------->ANAC58   <----------DOF2           ---   <---------MYB46(3)     <----------DOF2---------->DOF2   <-----------RAV1(1)              ------>ZmHOX2a(1)   taggtttgttcaaaatgcctgcatttcgctttgttgcacaagtaaaagaagaaaaacgaaattgttgctcttgactttctatgctacttctgtcctgcat  1754300                         --------->TOE1(1)                         --------->TOE2(1)                        ------>ZmHOX2a(1)                    --------->ARR14(2)                    <---------ARR14(2)                  <---------HSFB2a(1)                  <---------HSFC1(2)                  --------->HSFC1(2)                  --------->HSFB2a(1)                  <------MYB46(1)                                  --------->GLK1(2)                  <------MYB83                                   <---------HSFC1(2)             -----                 --------->MYB111(1) <----------DOF2             --------->HSFC1(2)--------->ATHB12         --------->MYB52(1)    <----------DOF2                   --------->HSFB2a(1) <---------WOX13(1) ------>ANAC58   --------->MYB59<---------MYB52(1)            --------->LBD16  <-----------GT1 ------ ------>ANAC58  <--------P ---------->ID1                   <---------LBD16 <---------REM1(1)  <-----   acccaaaaaaaaaacagagtaggttcctcgtccctttagctttaacacatgagctcttacaatgcggagtttctattgttgtaactgattgtttctccct  1754400                                                                      <----------DOF2                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                <-------GAMYB           --------->ICU4                                                              <---------ANAC46          ------>ZmHOX2a(1)                   <----------DOF2                       <---------GLK1(1)              <---------YAB1                  <---------ANAC58                       --------->GLK1(1)      --------->MYB55(2)                  <---------ANAC58                      <---------ARR14(2)      --------->MYB111(2)        <---------ANAC46                                --------->ARR14(2)  <---------YAB1        <---------ANAC58                           <-------MYC3<---------MYB46(3)<-------GAMYB   ----        <---------ANAC58                   --------->ANAC46   --------->ETT(1)  <---------MYB46(3) ---->LBD16    <---------MYB52(1)          --------->ANAC58 <-----------HVH21  <--------P--------->ATHB12 --->LBD16    <---------At4g35610          --------->ANAC58<-----------RAV1(1)<-------GAMYB<---------WOX13(1) ----LBD16    <-------GAMYB --------->TOE1(2)      ------->MYC3<---------SPL7<---------MYB46(3)  <---   ggaatagatggcatgcagttgcttcatggacatgggatgctcaagacgaaacatgtgggatatgtcggatggcttttgatggttgttgtcctgattgcaa  1754500  Previous    Next  AGI:  At3g05870.1    Description:  APC11 (anaphase-promoting complex/cyclosome 11); protein binding / zinc ion binding. similar to RBX1 (RING-BOX 1) [Arabidopsis thaliana] (TAIR:AT5G20570.1); similar to Zinc finger, RING-type [Medicago truncatula] (GB:ABN09776.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 1753967    to: 1754808    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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