Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------ARR14(2)                                                    --------->ARR14(2) <-------GAMYB                     <----------DOF2                --------->GLK1(2) <---------MYB46(3)                 <---------ZAT14                    <---------ARR14(2)--------->MYB46(2)                 --------->ZAT14                   <---------GLK1(2)  --------->MYB52(2)                 --------->ZAT18             <---------MYB52(1)     <--------P  --------->ARR14(2)                 <---------ZAT18        --------->MYB52(1)        <---------ZAT6--------->GLK1(2)             --------->DAG2             ------------>MYB.PH3(1)  <---------TOE1(3)            ---------->DOF2           --------->MYB46(3)   <---------TOE2(3)   <---------GLK1(2)       ----------->GT1   <---------ANAC46   <-----------HVH21    <---------TOE2(3)            -------   ttttgtcaattgaaaaaagtgaactttgagtgaaatttgaacaaaccgttagagaatcgtcgaggttagggttagttgagagaatcggtgaagaagataa  1719200                                                                                          -----------                                                                                          <---------ANAC46                                                                                        ------>NtERF2                                                                                        <---------ZAT18                                                                                        --------->ZAT18                                                                                      --------->ATERF1(1)                                                                                     <---------ORA47(2)                                                                                     <------MYB83                                                                                     <---------DEAR3(2)                                                                                     <---------ATERF1(1)                                                                                    <---------MYB46(3)                                                                             <---------ZAT2                                                                         <---------MYB52(1)                                              ---------->DOF2           --------->LBD16 --------->ABI4(2)         <-----------TGA1                     <---------AHL20(2)      <---------LBD16<------MYB46(1)         <-----------HVH21                   <---------ATHB12   <---------ARR14(2)  <---------DEAR3(1)        --------->DEAR3(1)        --------->ANAC46            --------->LBD16--------->At4g35610      ------>NtERF2           --------->CCA1(2)             <---------LBD16  <---------At4g35610     <---------ALFIN1    ---------->DOF2     --------->AHL20(2) --------->ARR14(2)  <---------DREB2C(2) <------ZmHOX2a(2)  ------>ZmHOX2a(2) ------>NtERF2      <---------GLK1(1)   --------->ZAT2 --------- -->CCA1(2)        <------ZmHOX2a(2) --------->DEAR3(1)  --------->GLK1(1)<--------P<---------DEAR4(1)   gagatcgacaccgtcactgcgatcggagaaagaaacacgacgacccaataaatcgcgagaactccggttccatccggtaagctgagtcggtgccctgaag  1719300                                                         <---------PCF2                                                         --------->ATERF1(1)                                                         <---------ABI4(2)                                                         --------->ZAT18                                                        ------>NtERF2                                                        <---------ATERF1(1)                                                        <------NtERF2                                 ==========================bZIP_DOF                             =====================HOX2a_HOX2a                             ------>ZmHOX2a(2)   <---------bZIP60(2)                            <------ZmHOX2a(2)    ==============================bZIP_DOF                           --------->ARR14(2)    <---------TGA1a                           <---------ARR14(2)    <---------O2                        ==========================HOX2a_HOX2a                       ===========================HOX2a_HOX2a                       <------ZmHOX2a(2)         --------->O2       ---------->DOF2<---------ZAT6                 <---------ARR14(2)    --------->LBD16<---------ANAC58  <---------LBD16                 --------->ARR14(2)  <---------LBD16  <---------ANAC46 --------->TOE1(2)               --------->LBD16   ---------->DOF2 --------->TGA1a <--------------OsCBT        <-------   --------->ZAT14    --------->ARR14(2)     <-----------HVH21--------->LBD16     <---------TOE2(3)   <---------ZAT18    <---------ARR14(2)<------NtERF2 <---------ANAC58 <---------LBD16     <--------- ---->AGL15  <---------LBD16======================HOX2a_HOX2a<---------ANAC46     <---------TOE1(3) - -->HVH21   ------->TEIL------>ZmHOX2a(2)  <------ZmHOX2a(1)<------NtERF2--------->LBD16<---------TOE1(3)   agtagtagactctgaaccggattggatccgatccgaatagccggaggagtcacatggcgggcaccgtagaaaacgcgggaatttagggttaagctttgtg  1719400                                             --------->ANAC46                                             --------->ANAC58       <---------MYB52(2)                    --------->ANAC58      --------->ANAC58                     ---------->DOF2      --------->ANAC46               <---------ANAC58               <---------------AGL15   <-------TEIL <---------SPL7       <---------ANAC58              --------->HSFB2a(2) --ANAC46   --------->TOE2(3)        <---------O2                  <---------HSFB2a(2)<---------WOX13(1) -DOF2--------->ANAC58               <---------ANAC46 <---------ZAT6--------------->AGL15 -------->At4g35610   <---------TOE2(3) <-----------HVH21  <-----------GT1 ----------->GT1   taagatgcaagaaaccgtagtacgaaggtagacgaagagtcgtgtcaaagccactcgtgttaaacccttccaaaaattagtaaaactgattaacttacaa  1719500                               <---------ALFIN1                       <-----------GT1                    ----------------------->TaNAC69(2)               --------->MYB59<---------ZAT18                                                    <---               <---------TOE2(3)                                     <---------YAB1      <---------CCA1(2)               <---------TOE1(3)   --------->ZAT14      ----------->GT1     <---------WOX13(1)  <----       --------->TOE2(3)      --------->ZAT18           --------->YAB1    --------->ATHB12     <----- ----------->GT1--------->ANAC55(2)<---------ZAT14<---------ZAT6<-----------GT1        ----------->GT1   aatttgtaacattagtttaggtaattttctggtccacttctctgttaaatcagtgttatagtaatataactcttattgattgacaaaactcgtatattta  1719600           --------->ATHB12                                <---------YAB1           <---------ICU4                                  --------->ICU4          <---------YAB1                                   ------>ZmHOX2a(1)        --------->YAB1                                    --------->TOE2(3)        <---------ICU4                                  <---------YAB1       --------->ICU4                     --------->ARR11(3)   --------->YAB1 ------ANAC46       --------->YAB1        <---------ARR11(3)  <---------YAB1 -----TOE2(3)  ------------>CBF    --------->At4g35610--------->YAB1 <---------ETT(2) ------GT1--------->ICU4      <------ZmHOX2a(1)      <---------YAB1  --------->ETT(2)             <--   cgtttaggcatcatgattacaatcacagaataggattagctaaataccttcgtttatcatccttattatagtcgacaagtcttacgaactacgagattag  1719700                                                             <---------RVE1(1)                      <                                                             <---------CCA1(1)                    ---                                                            <---------AHL20(1)                    ---                                                            <---------ARR11(3)                 ------                                                            --------->ARR11(3)                 <-----                                                            --------->AHL20(1)                <------                    ------>ZmHOX2a(1)                      --------->YAB1              <-----------GT1             <---------ANAC58                             ----------->ARR10         <---------AHL20(2)             <---------ANAC58                           ---------->DOF2           <---------YAB1 <---      <----------DOF2        <-------TEIL        --------->AHL20(2)           <----------DOF2 -------  <----------DOF2   <----------DOF2              <---------AHL20(2)     <---------GLK1(2)  ------>ZmHOX2a(1) -------GLK1(1)  ---------->ID1                <-----------TBP          <---------ICU4<-----------GT1   atttctttctttctgtcttgtccttttgagattcattctacagacttgtatttatatgcaaagatattttctaagaatttctttatttttatcctattaa  1719800       ----------->GT1       <-----------GT1              --------->ARR11(3)      ----------->GT1       <---------YAB1      <---------ICU4 ---------YAB1              <---------AHL20(2)  <--------HAHB4 ------>YAB1           <---------AHL20(2)       <--------ATHB1 ------>AHL20(2)      <---------AHL20(1)       --------->ICU4<---------TOE2(3) --->YAB1             --------->AHL20(2)       <---------ATHB12 ----ICU4             <---------AHL20(2)   ------------>CBF--------->CCA1(2) ---AHL20(2)     ------------>CBF <---------YAB1--------->YAB1----------->GT1 ------YAB1     <-----------GT1<---------YAB1  <---------ATHB51<------ZmHOX2a(1)---------->DOF2 -->AHL20(2)  --------->AHL20(2) <-----------GT1--------->ATHB51    <----------DOF2  --------->GLK1(2)   ttataaaactggaaaaataaacaatttttttttattatccttgttagcaataattaagaagataaggaaactttgaagaaaataaagaatttggacttgt  1719900                                                                                                 <---                                                                                    --------->ANAC55(2)                                                                                    --------->ANAC46                                                                                    --------->ANAC58                                                                                    --------->ANAC58                                                                                    --------->ANAC55(1)                                                                         <---------DAG2     ---------                                                   --------------------->WRI1      <---------LBD16                                          <----------DOF2                <----------DOF2--------->ANAC58                            <---------AHL20(2)<----------DOF2    <---------TOE1(2)--------->MYB52(1)                 --------->GLK1(2)  ---------->ID1 <----------DOF2    <-----------GT1   --------->ANAC58   ttgttttggataatggaagaatttggagttttaattttgtctctctttcttttctttgtttcattcgaatgtttacttttcaattcacggaagccagtta  1720000                                      <---------CCA1(2)                                   --------->LBD16<---------AHL20(2)--------->AHL20(1)                                  ------->GAMYB   --------->AHL20(2)<---------AHL20(1)                                 --------->MYB46(3)--------->AHL20(2)                                ------>MYB83--------->ANAC55(2)     --------->AHL20(2)  <---------------AtSPL8        ------>MYB46(1)------->TEIL         <---------AHL20(2)  --------->DAG2         ---------->DOF2    <---------ANAC55(2)    --------->YAB1           <-------- ---------->DOF2      --------->TOE1(3)--------->ARR14(2)    ----------->GT1    ---------->DOF2   --- ------YAB1           --------->TOE2(3)<---------ARR14(2)--------->ZAT6<---------AHL20(2)  --------->AHL20(2) -->GT1      --------->MYB52(1) -------->P <-------TEIL<-----------GT1--------->YAB1<------ZmHOX2a(1)   caataaagttcgaaataacgaaaaccttaaatccaaccgcatatatacgtatataaattacactagttaatataatattacagaaaggacatatataata  1720100  Previous    Next  AGI:  At3g05780.1    Description:  Lon protease, putative. Identical to Putative Lon protease homolog 3, mitochondrial precursor (LON) [Arabidopsis Thaliana] (GB:Q9M9L8); similar to LON_ARA_ARA (Lon protease homolog gene), ATP binding / ATP-dependent peptidase/ serine-type peptidase [Arabidopsis thaliana] (TAIR:AT5G26860.1); similar to Lon protease, putative [Arabidopsis thaliana] (TAIR:AT3G05790.1); similar to hypothetical protein OsI_010931 [Oryza sativa (indica cultivar-group)] (GB:EAY89698.1); similar to LON2 protein [Zea mays] (GB:NP_001105895.1); similar to putative LON3 protease [Oryza sativa (indica cultivar-group)] (GB:AAY21162.1); contains InterPro domain Peptidase Range:  from: 1714947    to: 1719614    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version