Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------YAB1                                       <------ZmHOX2a(2)                                      --------->ARR11(3)                        <------ZmHOX2a(2)                        --------->CCA1(2)                       <---------ARR14(2)                       --------->ARR11(3)     ----------->GT1   --------->ARR14(2)                             <---------ZAT14 ---------->DOF2       <---------ARR11(3)                             --------->ZAT14 -----DOF2             --------->AGP1 <---------ARR11(3)          --------->ZAT6<-----------GT1     -   tgagaaagagttacaaatggattaagatccaatgctcgaagatcattcatggaatataggtctctctatctctactctgttttatctgtttagaagtttg  1693200                                    --------->AHL20(2)                                    <---------AHL20(2)                                   --------->AHL20(1)                               --------->AHL20(2)                              --------->AHL20(2)                              <---------AHL20(2)                              --------->AHL20(1)                    --------->ANAC55(2) --------->AHL20(2)                                  <--------              <---------AHL20(2)   --------->AHL20(2)                                       ---------             --------->AHL20(2)<---------AHL20(2)                                       --------->AHL20(2)        ----------->GT1       <---------AHL20(1)  ----------->GT1  <---------ANAC46    XXXXXXXXXXXXXX       --------->DAG2  ------->TEIL<---------AHL20(2)          --------------------->WRI1<-----------GT1     ---------->DOF2<---------ANAC55(2) <---------AHL20(2)   <---------YAB1          --------->WOX13(1) ---------->GT1  <---------ATHB12  <---------AHL20(1)        <-------TEIL    ----------->HVH21   ttttgaaaaaaggtattaaatcatgtatcaaatttaatttattttattcattctgtaactatgttcattgtgtatttctatgacattcaattaacttgta  1693300                                            <---------AHL20(2)                              <---------AHL20(1)                              --------->AHL20(1)                                                -----       --------->AHL20(2)     --------->ARR11(3)                       --------->ZAT6        <-------     --------->YAB1        --------->AHL20(2)                        <-----------GT1         -------- -------AtSPL8--------->ARR14(2)       <---------YAB1           <---------AHL20(2)     --------->AHL20(2) ------>AtSPL8<---------ARR14(2)       --------->ICU4           --------->AHL20(2)<---------TOE2(3) XXXXXX>MIR162A/B          <---------AHL20(2)                  --------->ICU4     ----------->GT1   catccaaaaataaacaaatacgactatatttatatattgttatgattttttttttgttttttgtaattaataaacactacaattaagaaaaaaatgtgtg  1693400                             <---------TOE2(3)                           -------->HAHB4                           <---------ICU4                     --------->ANAC58                     --------->ANAC55(2)                     --------->ANAC46                     --------->ANAC55(1)       <---------TGA1a    --------->ICU4                                  --------->DEAR3(2)       <---------O2  --------->ANAC58                                    --------->MYB52(1)       --------->O2  <---------ANAC55(2)                   --------->TOE2(2)   ------>NtERF2       --------->TGA1a    <---------ATHB51      ----------->HVH21     --------->ANAC58      <-------- ------>GT1          ----------->GT1        <------ZmHOX2a(1)         --------->ANAC58   ------->TEIL --ANAC46        <---------AHL20(2)    --------->CCA1(2)  ----------------->AGL1      <---------YAB1 ->ALFIN1--------->ALFIN1 <---------YAB1 --------->CCA1(2)<---------ANAC55(2) --------->DEAR3(1)   gaaattctcaagtgggcattaaaacgtaattatggattaagagataggacttgaagggttacctatgtgagaacgaaacgacgacgttatgaatctagta  1693500                                                                 --------->HSFB2a(2) --------->AHL20(1)                                                                 <---------------AGL15                                                                 <---------HSFB2a(2) <---------AHL20(2)                                                                 --------------->AGL15                                                                ----------------->AGL2                                                       --------->ANAC58              --------->AHL20(2)                                            --------->ATHB12    <-----------------AGL3       --------                                         <------------CBF *TSS  ----------------->AGL3     <---------TOE1(3)  ---------->DOF2                   -------->P         --------->ANAC58              <---------AHL20(1) -------AtSPL8         ----------->TBP------->GAMYB    --------->ANAC46   ---------->DOF2  <---------TOE2(3)   catagaaagtcaacaaaattttggtataaatagatgacaaccccattgattagtatcacccaagtttctataaacagaaagaaacattttattaagctta  1693600                                           --------->At4g35610                           <---------ARR11(3)                           --------->ARR11(3)                                                     <--                       ---------->DOF2  <---------At4g35610    <-------GAMYB                 ------>ZmHOX2a(1)              --------->ANAC58    <---------ZAT2            <---------ANAC58                 --------              --------->ANAC58    --------->ZAT2  <---------ALFIN1  <---------ANAC58 --------->At5g28300              --------->ANAC46    <---------At4g35610       <---------ANAC58         <---------MYB52(1)           --------->TOE2(2)      --------->At4g35610  <----------DOF2           --------->MYB52(1) ->TOE1(3) --------->TOE1(2)  <-----------HVH21--------->REM1(1)    <---------ANAC58--------->LBD16   agaaaaaaaaaaaactacgaaatggcaaagaccttcagctccatctgcttcaccactcttttgctcgttgtcttgttcatctctaccggtaattcctgaa  1693700                                                                      ---------->DOF2             <--           --------->YAB1                                           --------->LBD16          ========       <---------AtLEC2                                            --------->LBD16           <------- --------->YAB1                                                   <---------HSFB2a(2)        <------- --------DOF2    <----------DOF2                              <---------GLK1(1)              <------- ->LBD16 --------->AtLEC2         --------->TOE2(3)           --------->GLK1(1)              --------   ctttcatatgcatgcataactttacacaaacatgtttcttaatttgaatatgtgttatatatagaaatcccgaagagcgaggctcactgtgatcactttt  1693800                  <---------------AGL15                  --------------->AGL15             <---------ZAT14            --------->ARR14(2)    --------->ANAC58                    <---------ARR14(2)    <---------ATERF1(1)            ----------->GT1                 --------->ANAC58                --    --------->ANAC58      <------ZmHOX2a(1)                        --------->ANAC46                -- -------LBD16--------->ZAT14     <---------ANAC58                  --------->ANAC58               --- =================================MADS_MADS<---------ANAC55(2)   <---------ALFIN1           --------- --------AGL15   ----------------->AGL3<---------GLK1(1)      --------->AtMYB61      <---------ANAC58 --DAG2>>>>>>>>>>>>>>>>>LFY      <---------ANAC58      --------->ZAT18    ---------->DOF2  <---------YAB1 ---DOF2     <---------ZAT18  --------->DAG2         <------ZmHOX2a(1)------->TEIL   <---------ANAC58 ------->AGL15 ------->TEIL  ---------->DOF2--------->LBD16  --------->MYB46(3)    --------->ALFIN1<-   tgggggaagccccagtgtacccatgtaaggaaaaagcttgtaaatccgtatgtaaggagcactaccaccacgcatgtaaaggagagtgcgagtatcatgg  1693900                                                                                   --------->ARR14(2)                                  ----------->TGA1                                 <---------ARR14(2)      <---------ZAT14             ----------->HVH21                                <---------ARR11(1)      --------->ZAT18          --------->ZAT6                                      ------->TEIL      <-------TEIL            <---------YAB1                                      <---------ARR14(1) ------->LBD16              <---------ICU4                                 --------->AHL20(2) ---->NtERF2               --------->ICU4                               ----------->GT1 ------>RAP2.6(2)          <---------YAB1                              ----------->GT1          <---- >YAB1--------->ZAT14  --------->At5g28300                           ---------->DOF2<---------CCA1(2) -----NtERF2          ----------->GT1         --------->YAB1    --------->AHL20(2)<---------CCA1(2)   ccgcgaagtgcattgccactgctacggtgattatcactgacgatttactaataaactcttatgcaatataaaaaagataaaatcgtatctctctctatat  1694000                                                    <---------YAB1                                                  --------->MYB52(1)                                                 ----------->TGA1                                               <---------At4g35610                  <---------ARR11(3)                                               --------->At4g35610            --------->YAB1      ---                                               --------->ZAT2       <---------ARR14(2)        <------                                              --------->GLK1(2)------>ZmHOX2a(1)    --------->ARR11(3)   <---------REM1(1)           --------->AHL20(2)----------->HVH21  --------->ARR14(2)        ------- -----AHL20(2)    <---------ANAC46       <------ZmHOX2a(1) <-----------GT1    ----------->GT1<-------   atatgatgtaagtgtaagttgtttgttttcaaataaaacaataggaagaagctgacgattgtttcctccctatacgtctatagtaatatcatgttgtatc  1694100  Previous    Next  AGI:  At3g05725.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G47480.1); similar to unknown [Populus trichocarpa] (GB:ABK95751.1) Range:  from: 1692516    to: 1693336    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g05727.1    Description:  hormone. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05730.1); similar to disease resistance-responsive family protein [Brassica rapa] (GB:ABV89608.1); contains InterPro domain Insulin-like; (InterPro:IPR016179) Range:  from: 1693558    to: 1694144    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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