Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <-------TEIL                    <------ZmHOX2a(2)                   --------->ARR11(3)                   <---------ARR11(3)                                                           <----          --------->ANAC58   --------->TOE2(3)              ------>MYB46(1)                     ----- --->At4g35610     --------->AGP1                           ------>MYB83                        ----- ----->RAV1(2)    --------->GLK1(1)                     >>>>>>>>>MYB2         ----------------->AGL2 --ALFIN1 --------->ANAC58--------->AHL20(2)       --------->ANAC58     <---------At4g35610  <------- -At4g35610  --------->CCA1(2) --------->AHL20(2)  --------->ANAC58     --------->At4g35610  <-------   tgaatagagagcaagaaatgagatccatttacataaattttgtagcctaaaccaagaaaaccaaacaaaaactcagcaaaaccagaagtagaagtgagtg  1660000                                                          --------->ANAC46                                                          --------->ANAC58                                                          --------->ANAC58                                         --------->MYB52(1) -----ZAT14                     <---------ZAT18       --------->ANAC58              <--------P ---->ZAT18                     --------->ZAT18       --------->ANAC58   <----------ID1         ----- ---->ZAT14       ----------->GT1  --------->ANAC46  --------->DAG2    --------->YAB1          ------ --ANAC58      <---------ANAC46 --------->ZAT14     ---------->DOF2    <---------ICU4          <----- --ANAC58<---------YAB1         <---------ZAT14 <-------TEIL    <----------DOF2   <---------MYB46(3)   cagagatgaatacgattgagtagagaaatgcaagttcactaaacaacgagtacataaagcaagcaactttcaattacgacgaattggttagtatacaacg  1660100                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                       --------->GLK1(2)                                                                                      <---------GLK1(2)                                                                                      --------->ARR11(3)                                                                                      --------->ARR14(2)       --------------->AGL15                                   <---------ZAT18        <---------ARR14(2)       <---------HSFB2a(2)                                     --------->ZAT18      <---------YAB1---      ----------------->AGL2                               <---------------AtSPL8   <---------TOE2(3) -->GAMYB                                                  --------------->AtSPL8   <---------TOE1(3) --->MYB46(3)               <----------DOF2      <---------At4g35610            <----------DOF2  <--- ----MYB52(2)   ---------->DOF2               <---------AHL20(2)             ------->TEIL       -----   aactcagccctagaaatagaaagacatcatctttcttattttgctaaatttatctgagagaagagtaccctaaatgttgaatctttaagattctcagtgg  1660200                                                                                        ------>ZmHOX2a(1)                                                                                    ------>ZmHOX2a(2)                                                                                   <---------GLK1(1)                                                                                   --------->GLK1(1)     ------>ZmHOX2a(1)                                                             <------ZmHOX2a(2) ------>ZAT18                                                                 --------->ANAC46 -------ZAT18<---------ZAT14                                                <---------ALFIN1 -------ZAT14--------->ZAT14          ------>ZmHOX2a(1)       --------->GLK1(1)--------->MYB46(3) ------>ZAT14--------->ZAT18  <----------DOF2                 <---------bZIP60(1) --------->ARR14(2) ------ANAC46<---------ZAT18  --------->TOE2(3) <---------LBD16          --------->ANAC46 ---------->AtSPL8         ------->TEIL     ------->TEIL      --------->bZIP60(1) <---------ARR14(2)   tgtactccttccaagtggactaaacgttgaatctttaatcctattgcatctacggacaactctgatatcatccaaactccacccgatctccttcgctctc  1660300                                  <----------DOF2                                 ------>ZmHOX2a(2)                               --------->ARR11(3)                               <---------ARR11(3)                               <---------AGP1                               <---------ARR14(2)                               <---------ARR14(3)                               --------->AGP1                                              <---------YAB1                       <------MYB83                                                      <---------ICU4                       <------MYB46(1)                                                   -------->ATHB1                       <---------DEAR3(2)                                             --------->WOX13(1)                      <---------TOE1(2)                                             <---------KAN4(2)              --------->ARR14(2)<------ZmHOX2a(2)                            <---------ANAC58              <---------ARR14(2)<---------RVE1(1)                         *TSS      ------------>CBF              --------->ZAT14  --------->ARR14(2)                       <---------ANAC58 --------->YAB1         <---------ZAT14       --------->ARR14(3)                       <---------ANAC58<---------ATHB12         --------->ZAT14       <-----------ARR10            <-----------HVH21<---------ANAC58    <---   tctctcttctctacagtattctcgttggtacaagatcttttcaacgcctagttgatgaactgtgtcagaaatttgctgggcttgagaacaatcattcttc  1660400                                          <-----------HVH21                                         <------MYB83 <---------ANAC46                                         <------MYB46(1)                  <-----------GT1       --------->MYB59                           <----------DOF2           <-----------GT1              <---------MYB46(3)                     <XXXXXXXXXXXXXXXXXXXXX          <-----------GT1      --------->MYB46(3)     <---------PCF2     <----------DOF2 -------DOF2------------>CBF --------->MYB52(1)     <---------ZAT18--------->HSFB2a(1)          -----   tttttgtgtttttttccaattcacattcgcctaacaacttgttgggtcacttagtggggtcgatttcaaatgttccttttggggctttaaggcctcttca  1660500                                                                                        <---------ANAC58                                                                                     ---------->ID1          <---------AHL20(2)                                                       <---------MYB46(3)      --------->ATHB12                                                           <---------ANAC58      <---------ICU4                <---------ZAT6                               <---------ANAC46     <---------YAB1        <---------------AGL15                                 <---------ANAC58     --------->ICU4        ------>ZmHOX2a(1)                                 ------->PIF5     <---------ATHB12     --------->TOE2(3)               <---------YAB1     <-------PIF5<----------DOF2    <---------TOE2(3)     --------->TOE1(3)   <---------ANAC58          <---------YAB1  <---------ANAC46 XXMIR163 --------->AHL20(2) --------->AHL20(2)      ----------->GT1<XXXXXXXXXXXXXXXXXXXXMIR167C ----->DOF2        --------->At5g28300        <---------ANAC58     <---------At4g35610  <---------ANAC58   aagtttaatgattttaatcactgtaattccttaaattagtgttttgttacttacagggttataaatgtaagcttatgctcgtggcttgttgctttgacaa  1660600                                                                             --------->DAG2                       <---------TOE2(3)                   <---------YAB1   ---------->DOF2                       <---------TOE1(3)                ------->TEIL      ------->GAMYB                --------->ARR11(3) <----------DOF2<-------TEIL         ----------->RAV1(1)      <----        <------ZmHOX2a(1)       --------->GLK1(2) ------->TEIL        --------->MYB46(3)   <---------At5g28300   aaaaaaaccaggacttgagaacttgaaggttgagtttcttttctagctaatgtacatgaatatgactaaacaacaacagaaagcgataccgattaccgct  1660700                                                                                           --------->ANAC58                                                                  --------->ANAC58  --------->At4g35610                                                                  --------->ANAC58  <---------At4g35610                         <-------TEIL                  --------->ANAC58         ------->TEIL  --------->ETT(2)       ------->TEIL                  --------->ANAC58--------->MYB52(1)  --------->ANAC58 ------DOF2          --------------->AtSPL8          ---------->DOF2  ---------->DOF2 ----------->HVH21   tttgtctacatattaactgaaacaatgtacatgttattagacattacagaaattgaaaagcaactagtaagccaaagggatgtatttgctgacaagtctc  1660800                                     -------->P                                     ------>MYB46(1)                                    ----------->RAV1(1)                                   ------->GAMYB                                   --------->AtMYB61                                  --------->MYB46(3)                                  <---------MYB55(2)                                  <---------MYB52(2)                                 --------->ANAC46                                    <-------TEIL            ------>NtERF2        --------->ANAC58                                   <--------P         --------->ZAT2    <-----------HVH21                                     <---------TOE2(3)         <---------ZAT2   ------>ZmHOX2a(1)                                    ---------->DOF2      -         --------->At4g35610     --------->ANAC58                           --------->ANAC46  <------         <---------At4g35610   --------->MYB46(3)             --------->ZAT6--------->ANAC58 <-------    <---------YAB1    <-----------GT1------>MYB83 --------------->AGL15     --------->ANAC58 <-------   tctcttctcatagctgcccaagtttttcctgtcacaaccaacaagaacaaaacctatttcagtaactctacaattaacacacaaaggttgatgatgcttt  1660900  Previous    Next  AGI:  At3g05675.1    Description:  protein binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G10800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50155.1); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210) Range:  from: 1658222    to: 1660374    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g05680.1    Description:  EMB2016 (EMBRYO DEFECTIVE 2016). similar to hypothetical protein [Vitis vinifera] (GB:CAN64186.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40955.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40956.1); contains domain UNCHARACTERIZED (PTHR23185) Range:  from: 1660558    to: 1671052    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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