Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <------MYB83                                                                                 <---------MYB46(3)                                                                                 <------MYB46(1)                                                                             <-----------RAV1(1)                                     <---------------AGL15                   <---------MYB46(3)                                     --------------->AGL15                  <---------WOX13(1)                                    ----------------->AGL3                 <------------CBF                                    <-----------------AGL2                --------->ATHB12                                    <-----------------AGL3               <---------YAB1                                    =================================================================                                    ----------------->AGL2               --------->ICU4                                  --------->ANAC58                     <------------CBF      ---------->DOF2   ---------->DOF2<-----------TBP              --------->ANAC55(2) ------TOE2(3)     --------->ICU4 --------->ANAC58                 --------->MYB59 ----->MYB59---------->DOF2--------->DAG2   ----------->GT1        <---------TOE2(3)                - ------TOE1(3)   ---------->DOF2---------->DOF2                    <---------TOE1(3)            <----   aggttagcaaaagaaaaagaaaagatgaaagagtgaaagccatatatagaaaaaaaaactagggaagtttaggtattgattgttggtgaagaaatgttct  1631900       --------->HSFB2a(2)                <-----------GT1    <----------DOF2                   <---------AHL20(2) <---------------AGL15            <---------AHL20(2)                --------->ANAC46 --------------->AGL15            --------->AHL20(2)                --------->ANAC58     <----------- ================MADS_MADS      --------->TOE2(3)      <-----------GT1  ---------->DOF2  ------------ ---------------->AGL1          <----------DOF2  <----------DOF2    --------->ANAC58    --------->ATHB12 ------DOF2       <------ZmHOX2a(1)   --------->AHL20(2)    <----------DOF2    <---------YAB1    <---   ttgcctctttgagaactgtaggaacaaattcaaactttaattttttaccttcttttgttactcttttctcaagccaaagttattctttcttcattgttca  1632000                                                                                           <---------ZAT6                                                                                         --------->ZAT14                                                                                         <-------TEIL                                                                                         <---------ZAT14                                          >>>>>>>ZML2                                   ------------>AtMYB77                                 <----------DOF2                                    <---------LBD16 -CBF  ------------>CBF        <---------At4g35610      --------->ANAC46        <-----------HVH21 --------->WRI1            --------->GLK1(2)            <---------ALFIN1       <----------DOF2 <----- ------CCA1(2)            <---------GLK1(2)      <----------DOF2------>ZmHOX2a(1)----------->HVH21   aatctctcattcaatgctctctaaactagattctgcttctagttctagcgacttttacacaccctcctagcctccaaatagctttcaccggtacagttac  1632100                                   --------->ANAC58                                   --------->ANAC58                      -------->P                               --------->DEAR3(2)                        --------->MYB52(1)                      <---------YAB1         --------->ANAC58          --------->MYB46(3)                    <-------TEIL   --------->ANAC46            <---------ANAC46                 --------->LBD16--------->DEAR3(1)          ----------->TGA1             -------->P  <---------WOX13(1)  --------->ANAC58--------->MYB52(1) ----At5g28300 <---------LBD16 --------->MYB46(3)           ----------->HVH21       <----------DOF2   agtattatctaatcttacccggttcagattgaaaccgacgcaatctcaagtaaaccgatagaatgacgggagaacaaccggttgagcttttggagtttac  1632200                                                                         --------->ARR14(2)                                                                         <---------ARR14(2)                                                                   <-----------GT1                                                                 <---------KAN4(2)                                                             --------->LBD16      <---------MYB52(1)                                      <-------TEIL  <---------AHL20(2)   <-----------ARR10                        --------->TOE2(3)          --------->AHL20(2)  --------->LBD16    <---------ANAC58             <---------ANAC58      <---------MYB46(3)       <---------LBD16   <---------At5g28300             <---------ANAC58   <------------CBF----------->GT1  ---------->TaMYB80       <---------ANAC58          <----------DOF2    >>>>>>>>>>>>>>>>>LFY  <---------AHL20(2)<---------LBD16      *TSS       <-----------GT1<---------AHL20(2)   ---------->DOF2 <---------LBD16   <-----------GT1   atcggtttattactttcttgttattttcttaacccattggttcatcaaagtgattaaataaaccgggattatccggattttaccgctacgttccttccct  1632300                                                                              <---------MYB46(3)                                        <---------GLK1(1)                   --------->At5g28300                                --------->DAG2                            <---------ANAC46                --------->At4g35610     --------->GLK1(1)                 <---------DEAR3(1)           <---------CCA1(2)   ---------->DOF2                            <------NtERF2          <---        <---------At4g35610<---------ZAT6     <---------MYB52(1)      <-----------HVH21          ----     ---------->ID1       <---------ANAC46  ----------->GT1 --------->GLK1(2)----------->ARR10<------   cccatttgtcatcttatcttctgcgattactggtaaagtgagaaatccgttaatccctagagaaactgtaatcgtcgcggtgattcggagaaattcttct  1632400      --------->At5g28300     --------->LBD16                   --------->YAB1                            ------>ZmHOX2a(2)    --------->ANAC46                  <---------ATHB12                         --------->ARR11(3)   <---------LBD16         ------>ZmHOX2a(2)                              --------->ANAC46   <---------At4g35610     ----------->GT1                               <---------At5g28300   --------->LBD16        <------ZmHOX2a(2)                              <---------LBD16   --------->At4g35610   --------->ARR11(3)                           <-----------HVH21  <---------ANAC46       <---------ARR14(2)                        <---------ANAC58    <----------DOF2 <---------LBD16         <---------ARR11(3) <-----------GT1        <---------ANAC58    ============== ------At4g35610         --------->ARR14(2)--------->GLK1(1)    <---------DEAR3(1)    <---------DAG2 ----->At4g35610   -------->P   <---------ARR14(2)              --------->ANAC46<------ZmHOX2a(2) ---At4g35610   <---------MYB52(2)  --------->WOX13(1)         <---------LBD16 <---------ARR14(2)   gcttccgcggaaaatgtcactaacccagatcgtgaatccaatcatatatccatctcgcacaattccacggcgtttcacggcgatctcgccttttaaaacc  1632500                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                               ------                                                                                              <------NtERF2                                                                                             --------                                                                                            <--------                                                                                            <--------                             --------->ANAC58                                              <---------LBD16                         --------->AtMYB61                                                 --------->ATERF1(1)                        --------->O2                                                       <------NtERF2                        --------->TGA1a                                                    --------->At4g35610                        --------->ZAT2                                                     <---------At4g35610                        --------->ANAC46                                                   <---------ABI4(1)                        --------->bZIP60(2)                                               ------>NtERF2                       ------>MYB46(1)                                                    <---------ATERF1(1)                       ------>MYB83                                                       <---------ORA47(2)                      --------->MYB55(1)                                                  <---------DEAR4(2)                      <---------ALFIN1                                                    <---------RAP2.6(1)                     --------->MYB46(3)                                                   <---------RAP2.3(1)                     --------->DEAR3(1)                                                   <---------ERF1                     <---------MYB111(1)                                                  <---------RRTF1(1)                     <---------MYB111(2)                                                 --------->ATERF1(2)                     <---------MYB55(2)                                                  <---------RAP2.3(2)                     <---------MYB46(2)                                                  <---------ATERF1(2)                    <---------ALFIN1                                                     <---------RAP2.3(3)                    --------->ANAC58                                                     <---------RRTF1(2)                    --------->ANAC58                                                     --------->DEAR3(1)                   ------>NtERF2                                                      ------->GAMYB<-                  <---------ALFIN1                                                    ===============                <---------ATERF1(1)                                                  <---------LBD16                ------>NtERF2--------->ANAC46                                        --------->DEAR3(2)                --------->LBD16                                                    --------->ARR14(2)               --------->ANAC46                                                ----------------->AGL1               --------->ANAC58                                   <---------------AGL15  <---------RRTF1(3)               --------->ANAC58                                   ------>ZmHOX2a(1)<---------ARR14(2)              <---------LBD16--------->ANAC58                     --------------->AGL15  <---------DEAR3(1)           <-----------GT1----------->HVH21                      <-----------------AGL1 --------->ATERF1(1)   --------->ZAT18--------->DEAR3(1)   <---------ANAC46          <-----------------AGL3 <---------ABI4(1) =================================bZIP_DOF                       <-----------------AGL2<---------ATERF1(1)   ctaagtccccaattttcccgccacccacctcacgcactgtctcgtagactcttccttccttctgtttcctctatatgggatgccataaccggcggcggag  1632600         <-----------HVH21        <---------O2        <---------TGA1a    <---------HSFB2a(1)    --------->HSFB2a(1)    --------->HSFC1(2)    <---------HSFC1(2) ------>GLK1(2) ------>CCA1(2) ----->ARR11(1)                    --------->LBD16 ------ARR14(2)                   --------->ANAC58 ----->ARR14(2)                   --------->ANAC58 ---->HSFB2a(1)                  ------>NtERF2 ---->GLK1(1)                    <---------LBD16                        <----------ID1 -----GLK1(1)                ----------->HVH21                      --------->KAN4(2) -----HSFB2a(1)             --------->SPL7                         --------->HSFB2a(1) ----->ARR10               --------->ARR14(2)                      <---------HSFB2a(1) ->LBD16--------->TGA1a<---------At4g35610                         --------->HSFC1(2)<---------DAG2 -DEAR3(1)             <------NtERF2       <---------At4g35610     <---------HSFC1(2)<----------DOF2 -ANAC46--------->O2   --------->At4g35610------->TEIL         ----------->GT1 --------->YAB1    ---- ------TEIL   ------>NtERF2<---------ARR14(2)          ----------->GT1  <---------ETT(1)     -------- =================MYC_MYB<---------MYB46(3)--------->At4g35610----------->GT1--------->MYB52(1) -----   attcgaaccctcgtgaggccatcgcagcggttcgacgcggaatgcagctcttcagacaggtaaattggaaaattccgacaaacagaacttttctaacata  1632700                                                                                     <------NtERF2                                                                                    ------>NtERF2                                                                                ------>ZmHOX2a(2)                                     ------>MYB83                               <---------MYB46(3)                            ------->TEIL                                        <---------DEAR3(1)                      ------>ZmHOX2a(2)                                       --------->ARR14(2)                      =========================HOX2a_HOX2a                <---------ANAC46                     ==========================HOX2a_HOX2a                <---------ANAC58                     <------ZmHOX2a(2)       <---------HSFB2a(2)          <---------ANAC58     <----------DOF2<---------ARR14(2)       --------->HSFB2a(2)     <---------REM1(1) ----->DAG2<---------AHL20(2)        ------>MYB46(1)<----------DOF2  <---------bZIP60(2) ->YAB1    --------->AHL20(2)<---------At4g35610    <---------DAG2   <-----------RAV1(1)<------NtERF2 ---->MYB52(1)      --------->ARR14(2)  ------>ZmHOX2a(1)   ---------->DOF2   <---------ARR14(2) ----   agggactctttttttaattttggatccttgaatctgaccatcctattcgagatgctttttgttaaagggtgatgttgctggatcggtggcagagttcgat  1632800  Previous    Next  AGI:  At3g05625.1    Description:  binding. similar to TPR repeat [Medicago truncatula] (GB:ABD28339.2); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR2 (InterPro:IPR013105); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 1632290    to: 1634145    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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