Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ------>MYB83                    <---------ANAC58                                                        ------>MYB46(1)              <---------YAB1                                                              <---------MYB111(1)     <--------ATHB1 <---------ANAC58                                                     --------->ANAC55(1)     --------->YAB1 --------->ANAC55(2)                                                  --------->ANAC46    <---------YAB1  <---------ANAC55(2)                                                --------->REM1(1)    <---------ATHB51<---------ANAC46                                                --------->ANAC46  --------->YAB1   <-----------------------TaNAC69(2)                            <---------ZAT14 >ANAC58  ----------->GT1              --------->TOE2(2)        --------->YAB1   --------->ZAT14 >ANAC58 ----------->GT1             -------->P             <-------TEIL         --------->ZAT18   --   tcaacaataataggttaaaattgcgtaaacaagtatacttacctatgtattagtagtttacatacatgataacaagtatgaagtatactacacctaatat  1621100                                                             --------->YAB1                                                             <---------ICU4                                                            --------->ICU4                                                            <---------ATHB12                                                            <---------YAB1                                                    --------->ANAC58                                <-----------GT1  <------NtERF2                            <---------AHL20(1) --------->ANAC58                            <---------AHL20(2) --------->ANAC46                            --------->AHL20(1) --------->ANAC58                         --------->AHL20(2)   --------->RAP2.6(3)         <---------ANAC58                         <---------AHL20(2)<---------HSFC1(1)<--------ATHB1                 --------->ANAC46          --------->HSFC1(1)--------->ATHB12        <----------DOF2  --------->AHL20(1)--------->HSFB2a(2)            <---------ANAC46        ---  <-------TEIL   --------->ANAC58          <---------HSFB2a(2)    <-----------GT1      <-----------GT1 --------->GT1   --------->ANAC58  <----------DOF2  --------->ANAC58      <---------ANAC58     <-----   gtggttcattcttttttctaagcaaaataaaatatttcttttcttctagacggcatgcatcaatgattaaactatttcttgtatcaatataactaatctt  1621200         ------->TEIL      <---------ANAC58      <---------ANAC46                                     <---------MYB46(3)      <---------ANAC58                                     <------MYB46(1)      <---------ANAC55(1)                              <-----------RAV1(1)                          -      <---------ANAC55(2)               --------->GLK1(1)  <------MYB83                   -----------      --------->ANAC55(2)  --------->AHL20(2)      <-----------GT1           ---------->DOF2<-------- ------>YAB1  ---------->DOF2          --------->ARR14(2)<--------P     ---------->DOF2   --------->YAB1 -----DOF2  <---------AHL20(2)  <-------TEIL <----------DOF2       ---------->DOF2 <----------DOF2 --   ttatagttacgtatataaaaggtttgtaagaaaatacatcagaaatgcttttttttcatgttggtcagaaaaagaaaaggaaaggctttctatggtgaca  1621300                       --------->AHL20(1)                       --------->ARR11(3)          <---------AHL20(2)          --------->AHL20(2)   <---------ICU4      --------->AHL20(2)  --------->ICU4       <---------ARR11(3) -------->YAB1         <---------AHL20(2)                                             ----------->GT1 >GT1 --------->AHL20(2)        <---------GLK1(2)                                    <--------------- --ID1<---------AHL20(2)   <-----------GT1                                   <---------ANAC46 ------->AHL20(2)      <---------AHL20(1)                               <---------ALFIN1   aataaaaattatataaatgggccaatatattacagaatttaagtccaaacttattgtggtcttatattcaaggcccatctcgtgaaggaagaaaataact  1621400                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)                                                                                      <-------GAMYB                                                                                     <---------DEAR3(2)                                                                                     <---------MYB46(3)                                                                                     <---------ATERF1(1)                                                                                     --------->ABI4(2)                                                                                    <---------DEAR3(1)                                                                                   <------NtERF2                                                                                  <---------ORA47(2)                                                                                  ------------>AtMYB77                                                                                  <---------RAP2.3(1)                                         <------MYB83                            <---------DREB2C(2)        <---------LBD16                  <------MYB46(1)                         <---------DEAR4(1)       <---------ANAC46                  ----------->GT1                         <---------DEAR3(1)--       <---------ANAC58    --------->TOE1(3)                    --------->ARR14(2)<---------ATERF1(1)       <---------ANAC58    --------->TOE2(3) ----------->TBP   *TSS             <---------ORA47(1) <- ------WRI1   <------ZmHOX2a(1)  <------------CBF        --------->YAB1        <-----------HVH21-----   aagcccatttcgtggaggaagtaagagaaccctaaaattgagttggtataaaaaccctagcatcagtattttcatgtagaaggtcggcggttccatcacc  1621500        <---------ETT(2)        --------->ANAC58        --------->ANAC58       --------->SPL7     --------->LBD16     <---------SPL7     ----------->HVH21    --------->DEAR3(1)   <---------LBD16                          --------->YAB1  ------->GAMYB                     <---------ANAC58                              <-------GAMYB --------->ANAC46                   <---------ANAC58              ------>ZmHOX2a(1) <---------MYB46(3) -------->DOF2                   <-----------RAV1(1)             <---------------AGL15  --------->MYB52(2) --------ALFIN1             ------>ZmHOX2a(1)                    --------------->AGL15<---------MYB52(1) ---->AtMYB61  --------->YAB1  ------>ZmHOX2a(1)             <----------DOF2     <-----------RAV1(1)   acaacgccggacgacaatggtacttctctcctcctctgtcgttcaatcttcatttctctctgtctttcctctacaagtattttctgttgttagtttgata  1621600                                          ------>ZmHOX2a(1)            <------MYB46(1)                                        <---------ANAC58               <------MYB83                                        <---------ANAC58    <---------ZAT14           <---------ARR11(3)    <---------ANAC58           --------->ZAT14           --------->ARR11(3)    <---------ANAC58        <---------ANAC46          --------->GLK1(1)     <---------MYB46(3)    <-----------RAV1(1)          ----------->HVH21          <---------GLK1(1)    <---------ANAC46   --------->AHL20(2)  <---------TOE2(3)          <---     <-------TEIL           --------->GLK1(2)     <---------AHL20(2)  --------->MYB59           <----   tcaaaggttcagaaatcttgttgttaagagattgtgggtgtttcctgtcattttaaatgttgtatagtgtattaggtttgtttttctgacatttgagtct  1621700                                                           <---------ANAC58                                                    <----------DOF2                                                   <---------ANAC58                                                   <---------ANAC58                <---------ZAT6                                               ------>ZmHOX2a(2)               <---------ANAC58                                             <---------ARR11(3)                <---------ANAC58                                             --------->ARR11(3)               <------MYB46(1)                                             <---------AGP1<---------ANAC58   <---------MYB46(3)                          <---------MYB52(1) <---------ARR14(2)               <------MYB83 <--------P     <------ZmHOX2a(2)            --------->ARR14(2)             <---------WOX13(1) ------ANAC46  --------->ARR11(3)           <---------CCA1(2)             --------->ATHB12 -----LBD16    <---------ARR11(3)     <---------TOE2(3)  <---------YAB1 <---------WOX13(1)   cgggttagagtgtgaacgatctatctctcttagtttttttgagattggatcttgctttcatgcttgtttgtgagattgattggttgtgttattgcagggt  1621800             <------NtERF2                     ---------->DOF2            --------->LBD16               --------->ZAT2           --------->DEAR3(1)             <---------ZAT2          <---------LBD16                 <---------At4g35610        =====================================HOX2a_HOX2a        ------>ZmHOX2a(2)                 --------->At4g35610     --------->TOE2(3)   ------>ZmHOX2a(2)                  <------ZmHOX2a(1)       --------->ETT(2)           <---------GLK1(2)  <---------At4g35610             ---------->DOF2             <---------ETT(2)<-----------HVH21 <---------AGP1                 --------->AtMYB61     <---------At4g35610    <---------ZAT6        --   attgatctgatcgccggaggtaagagtaagaagaccaaaaggacagctccaaagtctgatgatgtctacctcaagcttactgtcaaggtcagaattttaa  1621900                                                        <---------AHL20(2)                                                      <---------YAB1                                                   --------->AHL20(1)                                                   <---------AHL20(1)             <----------DOF2                       <---------AHL20(2)                              <-             ------>ZmHOX2a(1)                     --------->AHL20(2)                              <-          ---------->ID1                          --------->AHL20(2)                             <---    <---------ATHB12                              <---------AHL20(2)                             <---  --------->WOX13(1)                          --------->AHL20(2)                               <----- ------->TOE2(3)          <-----------GT1     <---------AHL20(2)             <---------YAB1    ------   acatcaatctttgtcctttgccttatattatccaattgaagaggttttttaattttattttagtgaattgttctgaattttgtttgtgaaattttgcagc  1622000  Previous    Next  AGI:  At3g05590.1    Description:  RPL18 (RIBOSOMAL PROTEIN L18); structural constituent of ribosome. Identical to 60S ribosomal protein L18-2 (RPL18B) [Arabidopsis Thaliana] (GB:P42791;GB:Q9M9W4); similar to 60S ribosomal protein L18 (RPL18C) [Arabidopsis thaliana] (TAIR:AT5G27850.1); similar to unknown [Populus trichocarpa] (GB:ABK93398.1); contains InterPro domain Ribosomal protein L18e; (InterPro:IPR000039) Range:  from: 1621463    to: 1623020    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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