Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------AHL20(2)             <---------AHL20(1)             --------->AHL20(1)                                              <------NtERF2             <---------ARR11(3)                                             ------>NtERF2       ----------->RAV1(1)                                       --------->ARR14(2)       --------->RAP2.6(2)                                       <---------ARR14(2)    --------->ANAC58            ---------->DOF2                 <---------At4g35610    --------->ANAC58   --------->YAB1                           --------->At4g35610         ---------    --------->ANAC46   <---------ICU4                         <-----------RAV1(2)       --------->HSFB2a(2)   --------->DAG2   --------->YAB1                  ---------->DOF2     --------->ALFIN1<---------HSFB2a(2)  ---------->DOF2 <-----------GT1             ---------->DOF2<---------At4g35610   ------->TEIL   accaaaaagccacaatattttttcatcatcaccacaaagagagggagagaaagagaaagagaccgcagatgcgaatgggggcatgaagctcgagaagatt  1619700                                            --------->GLK1(1)                             --------->ANAC58                             --------->ANAC46                           <---------DOF5.7(2)                           ---------->DOF2 --------->ARR11(3)                         --------->DOF5.7(2)<------ZmHOX2a(2)                        <----------DOF2    <---------ARR14(2)                       <---------ANAC46    --------->ARR14(2)                       <---------ANAC58    <-----------ARR10             --------->ARR11(3)            <---------AGP1             <---------ARR11(3)       --------->MYB52(1)             <---------ARR14(2)      --------->WRKY12      --------->At4g35610       ------>MYB83             --------->ARR14(2)      ----------->HVH21     <---------At4g35610       ------>MYB46(1)            <---------HSFB2a(1) ---------->DOF2    --------->AtMYB61          <----------DOF2       -     ---------->DOF2   <---------ANAC58    ------->TEIL ---------->DOF2<-----------GT1    --------->MYB46(3) -->ARR10  ----------->ARR10 --------->ANAC58------>ZmHOX2a(2)  ------->TEIL  <---------DAG2      ---   aggctgagaaaggaagatttgtctggcgttaacgcaaagttgacggatctcgacctccgaaagctgaacctgtttacctcctttaccttccaacaatctc  1619800                                                                        <----------DOF2                                                                       --------->TOE2(3)                                                           ------>ZmHOX2a(1) <-----------GT1                                                           =============HOX2a_HOX2a                                                           <---------At4g35610                                                           ----------->RAV1(2)     <---------ARR11(3)         <<<<<<<<<NAM        <---------YAB1     <---------DAG2              <-     --------->ARR11(3)      <---------ICU4       <---------ICU4     ------>MYB46(1)               --  --------->YAB1            <---------ATHB12     <---------YAB1      ------>MYB83        ---------->DOF2 <---------YAB1   --------->ANAC46               --------->ICU4      -------->P     --------->ARR14(2) -------->AHL20(2)--------->ANAC58           <-----------TGA1       <---------ALFIN1--------->GLK1(2) --->ZmHOX2a(1)   --------->ANAC58          --------->ANAC46     ------>ZmHOX2a(2) <---------GLK1(2)-   cttataatatcatccaatacacccatctccatcatcccttccatactcgtcatcattcttcctctgatcccaacctttttcaccagaatccaaaagggtt  1619900                                                                                              -------                                                                                             --------                                                --------->YAB1                              ---------       <-----------RAV1(2)                   --------->YAB1                                 <--------      <---------ATHB12                      --------->ICU4                            <---------ARR11(3) ----------------->AGL1                ----------->GT1                                <---------GLK1(2) ---------ID1                        ---------->DOF2                         ---------->ID1<---------LBD16 ------->ANAC46                  <---------AHL20(2)                 <---------TOE2(3) --------->ARR11(3) ----->NtERF2                   --------->AHL20(2)             <----------DOF2   <----------DOF2   --   tgcgccaaatcaggcgagaaacaatgggtctcgattaaataaagaaataatcagaaaatcacaaacttttaatgtttttgttcctttagattttcccgag  1620000    --------->LBD16   <---------LBD16   <---------ANAC46  <---------------------WRI1  <---------LBD16 -->LBD16                              --------->WRKY18(1)         --------->ANAC58 ->LBD16                              <-----------HVH21--------->ANAC58                           <-- >HSFB2a(2)                          ----------->GT1   --------->ANAC58              --------->ARR11(3) -HSFB2a(2)  ---------->DOF2  ---------->DOF2          ----------->GT1               <---------ARR11(3) -------->DOF2           ---------->DOF2     ---------->DOF2       --------->ANAC58 <---------CCA1(2)   aaaatgcgggaaacacaaaggggggaagaaagaaaagagaggtcaaacaaagggggaaggcaaaaccagaagcaatctctctctatatatctctctatta  1620100                                                                               <------------CBF                                                               <----------DOF2--------->ATHB12                                                              --------->ARR14(2)                             <------------CBF               --------->LBD16   <---------AHL20(2)                          *TSS                            <---------LBD16    <---------AHL20(2)                          ------------>CBF              <---------ARR14(2)   --------->AHL20(2)                          <------ZmHOX2a(2)             --------->ARR14(2)  <---------YAB1                      --------->ALFIN1                 <---------GLK1(1) --------->ICU4                  ---------->DOF2               --------->YAB1<---------ARR14(2)                 <------ZmHOX2a(1)   --------->ICU4<-----------GT1       <---------YAB1                 ================HOX2a_HOX2a   <---------AHL20(2)    <------ZmHOX2a(1)            <--              <------ZmHOX2a(1)    ---------->DOF2 --------->YAB1  <---------TOE2(3)            <---- -------ZAT6  ===================HOX2a_HOX2a   --------->AHL20(2)  <---------TOE1(3)       --------->At4g35610   gtcttaaaaactcagaggaggaaagtggatcaattggaaaagattagaattaataacaaatccggatttaaggagattattaattggagaaacagatggc  1620200                                   --------->HSFB2a(2)                                   <---------HSFB2a(2)                                 ------>NtERF2                              --------->At4g35610        <-----------GT1          <---------ICU4 ----NtERF2               <----------DOF2           <---------AHL20(2)            --------->YAB1 -----ANAC46------>ZmHOX2a(1) <---------At4g35610   --------->AHL20(2)<---------AHL20(2)--------->TOE2(3)   gcagataatagctccttctcttctctctcttttgctgccagaaatttttggaatttatatttcaactctgttttaaatggctattcattacattaagaga  1620300                                                                           --------->WOX13(1)                                                                      <---------AHL20(2)                   <---------YAB1                                    --------->YAB1    <---------YAB1                   --------->ICU4                                 --------->YAB1      <---------AHL20(2)     <---------DEAR3(2)  <---------YAB1                           <---------ICU4      --------->AHL20(1)    <---------DREB2C(2)  <---------TOE2(3)                        <--------HAHB4      <---------AHL20(1)   --------->DDF1--------->YAB1                                  --------->ICU4      --------->YAB1 <---------bZIP60(1)     <---------TOE1(3)                       <---------YAB1<-----------GT1 --------->bZIP60(1)<---------ICU4   <----------ID1  <-----------GT1<---------YAB1   --------->AHL20(2)   atgatgtcggtccaaaaaaacataattaagattagaaatggaacaagttgagttttaactatatacgattattatatcaattaacaattatatttagcaa  1620400                 ----------->GT1                      ------>ZmHOX2a(2)         <---------WOX13(1)            <------MYB83                             <------ZmHOX2a(2)        --------->ATHB12            <------MYB46(1)                         --------->ARR14(2)        -------->HAHB4           --------->MYB46(2)                       ------->TEIL     ----------->GT1      ---------->DOF2           --------->MYB59                          <---------ARR14(2)       <---------YAB1 ---------     --------------->AGL15                    --------->ICU4       ---------->DOF2    ---------->DOF2     <----------DOF2<<<<<<<<<<<<<<<<<LFY ----------->GT1  <---------ATHB12   --------->ICU4 ---------   tttctaactttgtttggtattgtaacaatggctactctacatgatgtaaaaatggatccaatgaactacaaaagaaaaaatgattggataaagaaagcaa  1620500               <------MYB46(1)               <------MYB83                                        <---------------AGL15    <---------ZAT14                              --------->DAG2    --------------->AGL15           <-    <---------ZAT18                       --------->ATHB12        --------->TOE2(3)              ----    --------->ZAT14      ----------->RAV1(1)   ---------->DOF2 <---------CCA1(2)               ------ >ANAC58      --------->MYB59            <---------YAB1    <-----------HVH21                --------- >ANAC58  --------->ATHB12  ------->GAMYB--------->ICU4   ----------->GT1 ----------->GT1 -----------   aaccagtgcaattgatttggtattgtccaacagaactaaaaacatgattaaaaggggaagttgtcaaatctcaaaatagaaaaacgaagacgaagtaatt  1620600  Previous    Next  AGI:  At3g05580.1    Description:  serine/threonine protein phosphatase, putative. Identical to Serine/threonine-protein phosphatase PP1 isozyme 9 (TOPP9) [Arabidopsis Thaliana] (GB:Q9M9W3); similar to TOPP8 (Type one serine/threonine protein phosphatase 8), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT5G27840.1); similar to Serine/threonine-protein phosphatase PP1 (GB:P48490); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; (InterPro:IPR006186) Range:  from: 1617853    to: 1620126    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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