Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------ANAC46                                                                     <---------ANAC58                                                                     <---------ANAC58                                                                   <-----------GT1                                                               --------->AHL20(2)                                                        <---------ZAT14          --------->MYB52(1)<---------YAB1              --------->ZAT14 --------TGA1         --------->WRKY45              <-----------GT1<---------AHL20(2)           <---- --------HVH21      <----------DOF2             <---------YAB1<---------YAB1          <---------ARR11(3)   gtcacattggactaactaaaaactttgactactattgaccttcaaaacttatttttactatactattatttacttgtaagttttccaatatgttttagtt  1608800                        --------->AHL20(2)                        <---------AHL20(2)                        <---------AHL20(1)                        --------->AHL20(1)                       <---------ATHB12                       --------->AHL20(2)                  --------->CCA1(2)                  <------ZmHOX2a(2)                                                       <---------WRKY12                 <---------ARR11(3)                                                     --------->At5g28300                 --------->ARR11(3)                                                    ----------->GT1                 --------->AGP1                                                <---------YAB1      <---------HSFB2a(2)                          <----------ID1              --------->ICU4      --------->HSFB2a(2)     <----------DOF2      <------ZmHOX2a(1)         --------->YAB1 -----ZAT18     --------->GLK1(1)                --------->MYB59        --------------------->WRI1   cacatgtactagaagatgagatccaataaattctttagtttttcaaacaattaggaacaaatttgtattactggcattgtcatcatcgacggtcaaatta  1608900                                                                   >>>>>>>>>>>>>AGL25              --                                                                <---------------AGL15              <-                                                                --------------->AGL15             <--                                                                =====================================                                                               <-----------------AGL3 ---------------                                                               ======================================              <----------DOF2      --------->ATHB12            ----------------->AGL2================        <---------RVE1(1)     <---------KAN4(1)           --------->YAB1             ----------------       <---------MYB52(1)     --------->KAN4(1)          <---------YAB1     ----------->GT1       ---  --------->ARR14(2)         <---------KAN4(2)         --------->YAB1    ---------->DOF2     --------  <---------ARR14(2)   <-----------GT1        ---------->DOF2  ----------------->AGL3----------------   ctcaaatccgatatttcttttttttttacagaataatcgattgaaacccaaagtcatttatgagaaccaaaaatagaaagctaaaataccaagatgggta  1609000   <---------AHL20(2)   --------->AHL20(2)                    --------->AHL20(2)                         --------->DAG2 ------->AHL20(2)                   --------->AHL20(2)  --------->DAG2             ---------->DOF2 --------AHL20(2)              <----------ID1          ---------->DOF2          ----------->GT1 -------AHL20(2)               ----------->GT1<---------AHL20(2)               <---------MYB46(3) ===========================================================MADS_MADS         <---------ANAC46 >AGL15  <---------AHL20(2)   ------------------------>ANAC81              ----------->HVH21 =MADS_MADS         --------->AHL20(2)  <---------AHL20(2)               --------->ZAT2 ===========================================================MADS_MADS    <---------ZAT2           <-- ->AGL1 --------->AHL20(1)    ----------->GT1--------->YAB1              --------->At4g35610     ---- ------>AHL20(2)    <---------AHL20(2)  --------->AHL20(2)               <---------At4g35610  <------ --->GT1<---------AHL20(2)   --------->DAG2 --------->AHL20(2)         <-----------RAV1(2)    ------- ->AG   --------->AHL20(2)  ---------->DOF2 <---------------AGL15     <---------At4g35610    <-------   ttaatttaaatttaatatccaaaaaattggaaaaggaaaaaaataaataaaaatggaaaaagcttagggggaagcagctgatgggtaaagtagacaaatc  1609100                                                          --------->LBD16                                                         --------->ANAC46                                                         --------->ANAC55(2)                                                         --------->ANAC58                                                        <---------LBD16                                                      --------->ANAC46                                                     -------->P                                                <---------ANAC58                        --------->ANAC58                                                <---------ANAC46                        --------->ZAT6                                                <---------ANAC58   <---------ATHB12     --------->ANAC58                 --------->ORA47(1)         ----------------------->TaNAC69(2)        --------->MYB52(1) ---------HVH21  <---------RAP2.6(3)        <------------CBF   ------------>CBF    --------->YAB1 ----->ANAC46   --------->RAP2.6(2)        --------->ATHB12 --------->SPL7    --------->ANAC46 ---ARR14(2)    --------->DEAR3(1)       <-----------HVH21<-----------HVH21 --------->ANAC46 -->ARR14(2)   --------->DEAR3(2)     --------->At4g35610<---------ANAC55(2)--------->ANAC58 --GLK1(1)     --------->ATERF1(1)    <---------At4g35610--------->ANAC58   --------->ANAC58  -------   cgtcagaataaatctgagccgtccattctagtctttggacagcggtcattgcttctaccccgtaacccaatctttctcacacaaaacataacgctacaga  1609200                                                                                         ------------                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(2)                                                                                    --------->ANAC46                                                                                    --------->ANAC55(2)                                              --------->LBD16                       --------->ANAC58                                              ===============================HOX2a_HOX2a <-------TEIL                                              ------>ZmHOX2a(1)       <------ZmHOX2a(2)<---------GLK1(2)                                             <---------LBD16  <---------MYB46(3)    --------->ANAC58                                            ==========================RAV          <---------LBD16                                            ----------->RAV1(2) ----------->HVH21 --------->MYB52(1)                                        <<<<<<<<<TBF1        --------->ALFIN1    --------->ZAT14                                <---------AHL20(2)           <---------AtMYB61   <---------ZAT14 ---->GT1        *TSS---------->DOF2<-----------GT1       <-----------RAV1(1)    --------->ZAT18   aaaaaaaaaaaactctaaaaaatcaaagagcgattttttttcttcttcctgggtctctctctggtggtgacgatcgaagagagttcacggattcgtacaa  1609300                ----------->GT1               <---------HSFB2a(2)          <---------ICU4          <---------AHL20(2)          -------->HAHB4         <---------ATHB51         <---------------AGL15         <---------YAB1         --------->ICU4                                                       <--------P      --------->AHL20(1)                                                      <---------WOX13(1)      <---------AHL20(2)                                                     <-------GAMYB      --------->AHL20(2)              <------ZmHOX2a(1)                     <---------MYB46(3)     <---------AHL20(2)             --------->ANAC58                        --------->MYB55(2)     --------->AHL20(2)             --------->ANAC58                     <------MYB46(1)  --------->AHL20(2)   <---------AHL20(2)                                <------MYB83  <---------AHL20(2)   --------->AHL20(2)                            --------->ARR14(2) --------->AHL20(2)   --------->AHL20(2)   <---------LBD16 <---------LBD16 <---------AtMYB61   ------ --->AtSPL3 <---------YAB1         --------->SPL7----------->GT1     <---------ARR14(2)       -------   ggattaaattaattattctggtaaattaatcgaagcgtaaggaattggggagagtgatttttctgggttcgaatttggtggttgattcaaaaaaaaaaaa  1609400                                                                                            ------>NtERF2                                                                                           ----------                                                                                           --------->DEAR3(1)                                                                                           --------->At1g77200                                                                                          --------->DEAR3(2)                                                                                      ------>ZmHOX2a(2)                                                                                    --------->ARR11(3)                                                                                    <---------ARR11(3)                                                                                   <---------ICU4                                                                                   --------->YAB1        --------->CCA1(2)                                                         --------->ICU4     <---------TOE2(3)                                  ----------->GT1         <---------ICU4 --->DAG2                        <---------TOE2(3)   --------->YAB1             --------->YAB1   ---- --->DOF2           <---------YAB1                  --------->ICU4             --------->ICU4<------NtERF2   gggttttgagatttgggttattttgatttcgaattttggttatgggtttaggcaataagggtaacaaattcaatttcggcgataatgatctcgccgacga  1609500                                            <---------ANAC46                                            --------->ANAC55(2)                                            <---------ANAC55(1)                                            <---------ANAC55(2)                 <------NtERF2              <---------ANAC58                ------>NtERF2            <---------MYB52(1)                 --------->MYB52(1)       ------>NtERF2                   <---------MYB46(3)             ----------->GT1      <---------PCF2                   <------MYB83                   <-------GAMYB   --------->ALFIN1                    <------MYB46(1)               <---------MYB46(3)   <-----------RAV1(1)     <---------AtMYB61<---------ANAC58         ----------->GT1 ->HVH21<------NtERF2   --------->ALFIN1<-------GAMYB              <-------GAMYB --->TEIL      <----------ID1         --------->MYB59             <---------MYB46(3)<------ZmHOX2a(2)   agctagtggtgccgatggcgacgaaggtgatggttttggttcggttgcgtgttcgatttgtctcgagacggttgttaaaaacggcgatcgagcatgggct  1609600                                                   --------->ARR14(2)                                                 --------->ANAC58                                                 --------->ANAC58                                            <---------YAB1           <----------DOF2             ----                                        <---------ARR14(2)        ---------->ID1              -------                                        <---------GLK1(2)<----------DOF2                     --------                                        --------->ARR14(2)     --------------->AtSPL8       ---------   aatcttcaatgtgaccatcagttccatctaggtgagtttgtggattctgatacgatactcttttttttgttctttttcattcgattgtttgaaaaaaagt  1609700  Previous    Next  AGI:  At3g05545.1    Description:  transcription factor, putative / zinc finger (C3HC4 type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G47700.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80748.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 1609217    to: 1612529    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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