Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->MYB52(1)                                           --------->MYB46(3)                                         ----------->RAV1(1)                                      ----------->RAV1(1)                                   --------->ANAC58                                                <-                                   --------->ANAC58                                     <---------AHL20(2)                                   --------->ANAC46                                   <---------RVE1(1)                                 <---------ALFIN1            <---------ANAC58        --------->ARR11(3) ------ZmHOX2a(1)  <---------TOE2(3)  --------->RAP2.6(2)    <---------ANAC58        <---------GLK1(2) -----MYB52(1)   --------->ICU4<---------ALFIN1            <-----------GT1           <---------ARR11(3)   taggaatattagtttagtaatgaggtttaagtcccacaggccacaacaaatggacatgtttttacttgtctaatatagatttagctagattttttttttc  1598200                                                                         <---------DAG2                                                                   <---------HSFB2a(2)                                                                   --------->HSFB2a(2)                                                               --------->ARR14(2)                                                               <---------GLK1(2)  --------->YAB1                                                     <---------AHL20(2) --------->HSFB2a(1)                                                     --------->AHL20(2)------->TEIL                 -              <---------CCA1(2)                 --------->AHL20(2) --------->HSFC1(1)     <---------ARR14(2)         ------->TEIL                         <----------DOF2<---------TOE1(2)<---------AHL20(2) ---- -----ZmHOX2a(2)                   ----------->GT1--------->YAB1   <---------HSFC1(1)     --------->ARR14(2)   gatcacacatgaactcttatctatctcgttgttgttgttgtaaattagcttttaataaaatcccagtttctcgaacctttttaatcacagcaaatactac  1598300               <---------ANAC58             <------MYB83             <---------ANAC58             <------MYB46(1)             <---------ANAC58                          <---------AHL20(2)             <---------ANAC46                         <---------AHL20(2)                  --------->At4g35610            <---------AtMYB61 --------->ARR11(3)      --------->AHL20(1)              <---------ARR14(2)       ----------->ARR10      <---------ARR11(3)      --------->AHL20(2)              --------->ARR14(2)  --------->ICU4             --------->YAB1           <---------AHL20(1)             <---------RVE1(1) <---------TOE2(3)        ---------->DOF2            --------->AHL20(2)              <---------CCA1(1) --------->DOF2<---------ANAC58                 <----------DOF2       <---------YAB1<---------ARR11(3) ----->TOE2(3) <---------ANAC46       <----------DOF2<---------AHL20(2)             --------->ARR11(3)   attaaagattagatttggtgtgttttgctaaagataatgcctttcatgcgcttaaattaatttgaatgggtttcgattgaaattgggatatttgctgcaa  1598400                            --------->ALFIN1                           ------->MYC2                           <-------PIF5                           ------->MYC3                           <-------MYC4                           ------->MYC4                           ------->PIF5                           <-------MYC3                           <-------MYC2                          --------->PIF3(3)                          >>>>>>>>>>HY5                          <---------PIF3(3)                          --------->O2                          <<<<<<<<<<HY5                          --------->TGA1a                          --------->bZIP60(2)                          <---------bZIP60(2)                          <---------TGA1a                                      <---------MYB52(2)                         <<<<<<<<<<AtbZIP1                      --------->GLK1(1)             <------                       ---------------->PIF3(2)    --------->ANAC46     <---------YAB1    --------->ATHB12                  <---------ICU4                   --------->ANAC58   <---------ICU4     --------->ICU4                 --------->ICU4          --------->YAB1------>NtERF2 <---------YAB1      <---------YAB1           <---------HSFB2a(2)         <-----------HVH21  <-----------TGA1    <---------------AtSPL3           --------->HSFB2a(2)     --------->GLK1(2)  <---------ALFIN1--------->YAB1  --------->WRKY18(1)        <---------ARR14(2)<---------O2--------->WOX13(1)  <-----------HVH21 <---------WRKY12 --------       <---------SPL7 <----------------PIF3(2)     --------->ANAC58--------->YAB1--------->MYB52(1)   aaacgatgcggttcgagtaagaatggccacgtggcacaatctatcacatcaaaacgacaccgtcagaattcatcatggtaaacgaacggtcatgatttaa  1598500                                       ------->TEIL                      <------NtERF2                                 ----------->HVH21                      ----------->RAV1(1)                                 --------->ICU4                       <------NtERF2                             --------->ZAT18                          --------->RAP2.3(1)                             ------------>CBF                        <---------ATERF1(1)        <---------ALFIN1   <---------ZAT18 <-----------GT1           <---------RAP2.3(1)      ----------->RAV1(1)  --------->ZAT18 ------->TEIL              ------>NtERF2             <-----   <------ZmHOX2a(2)  <---------YAB1<---------YAB1      <---------ZAT14 ------>NtERF2   ------>NtERF2   =================HOX2a_HOX2a  ----------->TGA1    *TSS   <---------GLK1(2)   <-----------GT1<----- ---AHL20(2)  ---------->DOF2<---------ZAT14     <---------ZAT14    <---------DEAR3(1)  --------->LBD16 ->AHL20(2)  <------ZmHOX2a(1)   <---------ATHB12--------->ZAT14 --------->ETT(2)     <---------LBD16   tcgcgatccaacacaggaaagtttatgagtgtgcaatgacgaatgtatccctacagagttcagaatatcgacggcgacaatttctctctccggctaactt  1598600                   <------NtERF2                   ------>NtERF2                  <---------SPL7                 <---------ANAC46                 <---------RAP2.6(2)                 <---------ANAC58       ---------->DOF2                                                          --------->O2  --------->HSFB2a(2)                                                           <---------O2  <---------HSFC1(1)                                                    --------->GLK1(1)  <---------HSFB2a(2)                                                   <---------GLK1(1)  --------->HSFC1(1)--------->SPL7                                 --------->DAG2                ---- ----DAG2        <---------ANAC58        <---------ETT(2)         ---------->DOF2           ------>ZmHOX2a(1) -----DOF2      <---------LBD16          --------->ETT(2)    --------------->AGL15         --------->TOE2(3)   ttttctagagaaagctatggcggacgaagaagatgagttactggagacagaactaagttacgaccagaaaaaggaaatcgccaagtggtttttcctcaac  1598700                           ---------->DOF2                    --------->ANAC46                    --------->ANAC55(2)                    <---------ANAC55(2)                    <---------ANAC58                    <---------bZIP60(2)                    --------->bZIP60(1)                                           ----------------->AGL1                    <---------bZIP60(1)                                    <---------MYB52(1)               --------->WOX13(1)           --------------->AtSPL8     ------>ZmHOX2a(1)            -             <---------ATHB12              ------->TEIL                ==============================   --------->LBD16  <---------ANAC58     <-------TEIL              --------->ARR14(2)               < --->GAMYB --------->GLK1(1)     <-------TEIL       <-------TEIL --------->HSFB2a(1)     --------->YAB1   gctcccgctggagaaatcaattacgtcgctaaaggtacttagatgcatcgtacatacatatttccgacgattcctccgatgtgtccctcaatgagaaggc  1598800              --------->LBD16             <---------ANAC58                              <----------DOF2             <---------ANAC58                           --------->ARR11(3)             <---------ANAC46                           <---------ARR11(3)            <---------LBD16                         ----------->HVH21                       ---------       <---------GLK1(2)                        --------->ATHB12                          <---------At4g35610 <---------YAB1                              <---------ANAC58                    <----------DOF2 <------ZmHOX2a(2)                           <---------ANAC46                 --------->ARR11(3) -------->ARR11(3)                           <---------ANAC58                 <---------ARR11(3) =======HOX2a_HOX2a                          <---------ANAC55(2)             <---------CCA1(2) ---------ARR11(3)  <----------DOF2          --------->ANAC55(2)     <---------GLK1(1)    --------->At4g35610   gagatcatagattctccgtgtgcattttgttttgttttgagcatcatgcgtgatttgacatctttgtttcgatttctgtaaatcttttggacttctgaca  1598900                                       --------->At4g35610                                       <---------At4g35610                                    ---------->DOF2                                   <---------ATHB12                             <---------ZAT14          <---------ARR14(2) --------->ZAT14          --------->ARR14(2) <---------ZAT18       <---------RAP2.6(2)   --------->ZAT18                      ----------->RAV1(1)       <---------DEAR3(1)   ----------->GT1   --------->AtLEC2<---------ZAT18  ---------->DOF2          <---------------AtSPL8             <---------ZAT14 <---------AHL20(2)     <------ZmHOX2a(1)--------->RAP2.6(2)  --------->ZAT14   --------->ATHB12 -->HVH21<-------GAMYB<---------------------WRI1      --------->GLK1(1)      --------->ANAC55(2)   gatttaaaggcggttttgagcgatgaggaagtgtacaatgaagcagccatggaagcatttccagtgtacaacaaaactcacatgatttgccttgaaatgc  1599000             <---------bZIP60(1)             <---------TGA1a             <---------ANAC46             --------->bZIP60(1)     <---------At4g35610     <---------ZAT2                                                    <-----------HVH21         ----     --------->ZAT2                                              <---------MYB46(3)              ----     --------->At4g35610                                         <-----------RAV1(1)            ----- --------->ALFIN1                                           <---------YAB1    <------ZmHOX2a(1) <----   ccagtggagctggtgatgtgagttagcatcttattctggttctattctacttagttgaaattttcatttgttgtgtcataggagttgaattgtcgaacat  1599100  Previous    Next  AGI:  At3g05510.1    Description:  phospholipid/glycerol acyltransferase family protein. similar to phospholipid/glycerol acyltransferase family protein [Arabidopsis thaliana] (TAIR:AT1G78690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17523.1); contains InterPro domain Phospholipid/glycerol acyltransferase; (InterPro:IPR002123); contains InterPro domain Tafazzin (InterPro:IPR000872) Range:  from: 1595400    to: 1598277    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g05520.1    Description:  F-actin capping protein alpha subunit family protein. Identical to F-actin-capping protein subunit alpha [Arabidopsis Thaliana] (GB:O82631;GB:Q9MA66); similar to hypothetical protein [Vitis vinifera] (GB:CAN68894.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17527.1); contains InterPro domain F-actin capping protein, alpha subunit; (InterPro:IPR002189) Range:  from: 1598553    to: 1601316    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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