Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------WOX13(1)                                                                            <---------ANAC55(1)                                             --------->At4g35610            --------->ANAC55(2)                                            <<<<<<<<<AtERF-4                <---------ANAC55(2)                                            ------>NtERF2                   <---------ANAC46                                            <<<<<<<<<AtERF-3                <---------ANAC58                                           <---------RAP2.3(3)              <---------ANAC58     <---------ZAT18                       <---------RAP2.3(2)             <-------TEIL     --------->ZAT18          <------ZmHOX2a(1)  ---------->DOF2         --------->ARR14(2)      ---- --------->DOF2     <-----------RAV1(2)   --------->RAP2.6(3)            <---------ARR14(2)      ---- -->ZmHOX2a(2)   --------->ANAC46        --------->MYB52(1)              --------->ARR11(1)      ---- --ZmHOX2a(2)    --------->ANAC58       <---------SPL7               ---------->DOF2     ----------->RAV1(1) --->ARR11(3)    --------->ANAC58       ----------->HVH21--------->TOE1(3) <-----------------------TaNAC69(2) ----ARR11(3)  <---------ALFIN1  --------->MYB52(1)      --------->TOE2(3)--------->CCA1(2)   <------   cgtagagcgaactaattccaccccagaggggaggaaaacggtctgacggctcaaagaaaccctaaacaaaccaaagatacgtgattaacaacaacataca  1576000                                                              <---------ICU4                                                              <-----------GT1                                                              --------->MYB52(1)              <---------ICU4                              <---------YAB1  --------->ARR14(2)                                  <------NtERF2  --------->GLK1(2)                                 <---------ANAC46  <---------ARR14(2)                                <---------ANAC58 --------->GLK1(1)                                  <---------ANAC58 <---------GLK1(1)                             <---------ANAC58 ----->ANAC46 --------->YAB1                   <---------ANAC58 ----->ANAC58 <--------HAHB4                   <---------bZIP60(2)                              ----- ----->ANAC58<---------ATHB12             <------ZmHOX2a(1)--------->YAB1                    -------- -TEIL      ------->TEIL        --------->ARR11(3) ---------->ID1                            <-------   cgaaaatccgaatgaatcattttctactcgagaataccttgttaggatgacttggcgtctataataacgacatttctcatcaaactccttgtccgaatac  1576100                                                                  ------>ZmHOX2a(1)                --                                                              --------->ARR14(2)                   ==                                                       <---------At4g35610                      -----         --------->At4g35610                          ------>NtERF2                          <------- <---------At4g35610                                <---------LBD16                          -------- ----------->RAV1(2)                                --------->RAP2.6(3)                  <-----------TGA1 ---->ANAC46              ------>NtERF2       ------->GAMYB   <---------ARR14(2)         <-----------HVH21 ->ARR14(2)     --------->YAB1          --------->YAB1--------->LBD16------>ZmHOX2a(1)  --------->ANAC46 --ARR14(2) <------ZmHOX2a(1)          <---------YAB1<---------RAP2.6(2)      ----------->HVH21 -----   cccatctgatcagaggaatgatactctcggccatcgaagctatcataaccccattccggctcactatcctcctcatccctgtgactctcttcgtcacctt  1576200                                                                                                 ----  ==================HOX2a_HOX2a                                           <---------ANAC58   <-------  ------>ZmHOX2a(1)                                                       <---------ANAC58  <------MYB46(1)  <---------At4g35610                                             --------->At4g35610       <------MYB83 ---->ZmHOX2a(1)      --------->ANAC46                            <---------At4g35610      <---------MYB46(3) ===================HOX2a_HOX2a                               <-----------HVH21            --------->ALFIN1 ->MYB46(1)         --------->HSFB2a(2) <---------GLK1(2)     <-----------TGA1             <---------AtMYB61 --At4g35610        <---------HSFB2a(2)--------->ATHB12      --------->ANAC46             --------->ALFIN1 ->At4g35610 ------>ZmHOX2a(2)   ------>ZmHOX2a(1)           --------->bZIP60(2)          <--------P< ->MYB83     ===========================HOX2a_HOX2a         ------>ZmHOX2a(1)  <----------DOF2   <---   cctcctctgattcgatcgtcttccacaacaacgtcctcgactgattcgtattcttctccgtcctcgtcagctatttgctcgctttcaccagggttggggg  1576300                                        <---------MYB46(3)                                       --------->ALFIN1                                      <---------MYB52(1)                                     <---------DEAR3(2)                                    <---------DEAR3(1)                              --------->WOX13(1)                                    <---------DREB2C(2)                            <-------TEIL                                  ------->GAMYB                                   <------ZmHOX2a(2)                                 --------->ANAC46                                --------->ARR11(3) -                               <---------ATERF1(1)                               <---------ARR14(2) <                         --------->CCA1(2)                                       --------->ARR14(2) <                        --------->ARR14(2)  --------->HSFC1(2)                   <---------ARR11(3)<-  ------>NtERF2         <---------ARR14(2)  <---------HSFC1(2)        <-----------HVH21     <-------- ----->ARR14(2)  --------->LBD16 --------->DEAR3(1)                  <---------ANAC58      <--------- --ANAC46      --------->LBD16<---------WRKY12                       <---------ANAC58  <--------HAHB4 ---------RAP2.6(2) ---------->DOF2<---------LBD16   <---------MYB46(3)         --------->GLK1(1)  -- ------ARR14(2)<---------LBD16<---------WRKY38(1)  <---------MYB52(1)--------->ANAC46 <---------ATHB12   tttcggccctgcgcttccccagaaaagataggccaacgccggtggatgtttccattggttccatcacatttacgtcgctcgaagatccatcatttacctc  1576400     <---------TOE1(2)     <---------TOE2(2) <------NtERF2 ----->NtERF2                                                     <<<<<<<<<MYB2 -----------HVH21                                      --------->ANAC58 ---------ATERF1(1)                                    --------->ANAC46 --------DEAR3(1)                                      --------->ANAC58<----------DOF2 -At5g28300                            --------->TOE2(3)        <------MYB46(1) --GT1                                 --------->TOE1(3) ------------>CBF                     ------- ------->DEAR3(1)              <-----------GT1   <----------DOF2<------MYB83                  -------   gccgtcgcatgattttggagccatgtcgatttttttcaaaaccctaaattccttttcaagccaatttggttttcttttgtagagaagaagcctagccaac  1576500             --------->AHL20(1)           <---------AHL20(2)           <---------AHL20(1)           --------->AHL20(1)        --------->AHL20(2)        <---------AHL20(2)      <---------YAB1     --------->TOE2(3)    <--------HAHB4  <---------ANAC58    --------->YAB1  <---------ANAC46                                          <------ZmHOX2a(1)   <---------YAB1   <---------ANAC58                                        <---------TOE2(3) -->MYB52(1) <---------AHL20(1)                   <xxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---->RAV1(1)--------->AHL20(2)               <----------DOF2    ---------->DOF2   agtttatcattaaaatattttagcttgtagtctcatatttgtgtgattctttttttttttttttttttaaaggaatttgaggaacacatttgtttgattt  1576600                                                                  --------->AHL20(2)                                                                  <---------AHL20(2)                                                              --------->AHL20(2)   ------------>CBF                                                        ------->GAMYB              --------->ZAT14                                             ------->GAMYB  <----------DOF2    --------->ZAT6              <----------DOF2--------->MYB52(1)      <-----------GT1         <-----------GT1   ------     --------->ANAC46--------->YAB1       ----------->RAV1(1) <---------AHL20(2)   <---------ZAT14   ttcttatacaaaacaactttgttttataatctaactgaaaattccaacagagacttaaccctctttaattaatgactattcacagtacaatgctaaatag  1576700             <---------AHL20(2)             <---------YAB1          --------->ARR11(3)         --------->YAB1        <---------YAB1                                               --------->TOE2(3)      --------->CCA1(2)                                            <---------ATHB12     --------->ARR11(1)                                        <---------ATHB12     <---------ARR11(3)                                      --------->WOX13(1)     --------->ARR11(3)                                  <----------DOF2   ----------->ARR10                                   <---------ANAC58            --------->AHL20(2) ----->GT1<---------ARR11(3)                           <---------ANAC58 --------->YAB1  ----------->GT1   taaataagatatgatattattctcttccatcaacttggaaatggtctctcttccattgcctttcaatcaaacattaatagacaaaataaacagaaaaatt  1576800                                                              ----------->GT1                                                              --------->ANAC58                                                       <---------AHL20(2)                         <--                                                       --------->AHL20(2)                     -------               ---------->DOF2           ---------->DOF2      --------->ANAC58               --------      <---------------AGL15         ------->MYC3       <---------AHL20(1)                    <-------     <-----------------AGL3         <-------MYC3       --------->AHL20(1)                  --------->ANAC58  <---------ANAC46  ----------->GT1<---------O2     --------->YAB1 --------->ICU4          --------->ANAC58   agttgctgataaatatggaaagaagtcaaaacccaaaacgtggcaaagtatgtataataaattcaagtaaaaattggtttcttcagcatgagcaagatat  1576900  Previous    Next  AGI:  At3g05450.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05685.1); contains InterPro domain Cystatin-related, plant (InterPro:IPR006525) Range:  from: 1574227    to: 1576424    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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