Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <----------DOF2                                                                             <---------ZAT2                                                                           <---------ZAT18                                                                          <---------ANAC58                                                                          <---------ANAC58                                                                   <---------AHL20(2)         --------->AHL20(2)                                        --------->AHL20(2)    ----------->GT1                                            <---------RVE1(1)  ---------->DOF2                                             <---------ARR11(3) -----DOF2 --------->AHL20(2)                                 <---------AHL20(1) ---ANAC58--------->AHL20(1)                                  --------->ARR11(3)         --------->MYB52(1) ---ANAC58<---------AHL20(1)                      <<<<<<<<<TBF1<---------CCA1(1) <---------YAB1   tcagtaaagaaatatatatagttttttttgtctgagtctctcgcattgtttcttcttccaataagatatttttttagcgagctttgattactaccgatgt  1567200                                              <----------DOF2                                              <---------DAG2                                           <---------DOF5.7(2)                                         --------->DOF5.7(2)                                         <---------MYB52(1)                                        --------->TOE2(3)                                    --------->KAN4(2)                                    --------->ARR14(2)                                    <---------ARR14(2)                                   <----------TaMYB80                                   <---------KAN4(1)                                   --------->KAN4(1)                                   --------->HSFB2a(1)                                   <---------HSFB2a(1)                                  --------->ARR14(2)                                  <---------YAB1                                  <---------KAN4(2)                                --------->ICU4                                  ---------->TaMYB80                       ----------->HVH21  <----------DOF2                <---------GLK1(2)                     --------->ALFIN1--------->YAB1   ttagctttgttctctgttatacaagtgattcaccagaatattcgttaacttttttgaaatatttgttttgggagtgtctgacaaaattatgaaaactaaa  1567300                                                                                                 <---                                                                                                -----                                                                                         --------->AHL20(2)                   <---------ICU4                                                        <---------AHL20(1)                  --------->ICU4                                                         --------->AHL20(1)                  <---------YAB1                                                        --------->AHL20(2)                <---------ICU4                                                          <---------AHL20(2)                --------->YAB1                                                      <---------AHL20(2)               <---------ATHB12                                                     --------->AHL20(2)               --------->ICU4                                                       --------->AHL20(1)             --------->WOX13(1)                                                    <---------AHL20(2)           --------->At4g35610                            <----------DOF2          --------->AHL20(2)           ------------>CBF                         --------->ZAT14          --------->YAB1   <------        <------ZmHOX2a(2)        <-----------GT1    <---------ZAT14      <---------AtLEC2<---------AHL20(2)   tcagtttacgatcagcaatcataattttcttatatttacgagtctcttactctcttcactctttagtcttcgtttgcattaaaaattaaattaaatttac  1567400                                                                                <---------O2                                                                                --------->O2                                                                                <---------ANAC58                                                                                <---------ANAC46                                                                                <---------ANAC58                                                                                <---------bZIP60(2)                                                                                --------->ANAC55(2)                                                                                --------->TGA1a                                                           <------ZmHOX2a(2)    <---------ANAC55(2)                                                          --------->ARR11(3)    <---------bZIP60(1)                                                          <---------ARR11(3)    --------->bZIP60(1)                                               <---------AHL20(2)               <---------TGA1a                                          --------->AHL20(1)                  <xxxxxxxxxxxxxxxxxxxxxx                                          --------->AHL20(2)  <---------ANAC55(2)        <-----------                        <---------ANAC55(2)    --------->AHL20(2)             <---------TGA2(2)           --------->ZAT18         <------NtERF2   --------->AHL20(2)        ----------->TGA1           <----------ID1          --------->At4g35610---------->DOF2        ----------->HVH21 ------MYB59            --------->ANAC55(2)    --------->AHL20(1)       ---------->ID1 --------->ANAC58 ---->ANAC46          <-----------GT1     <---------AHL20(2)  --------->ANAC55(2)      --------->ANAC58 -----GT1  <---------ZAT18         <---------At4g35610====================================bZIP_DOF   ctcacttcgtaagtggacaaaaaatcacgttttaggcagcaaaataaaataaaataaaaagatcacgtttttttgtcccatgacgtggcaacctattact  1567500                                ----------->HVH21                                ----------->TGA1                    --------->AtMYB61               --------->DOF5.7(2)                                                  <---------At4g35610     <---------HSFB2a(1)      <---------ICU4                                     ---------->ID1     --------->HSFB2a(1)      --------->YAB1                               <---------ANAC58 xxsmallRNA(se3)--------->WRKY38(1)              <---------MYB59           <---------ANAC58 ------AGL3    <---------MYB52(1)   <---------At4g35610    ------>ZmHOX2a(1)<----------DOF2    <-----   ggatgggaagttcgaccgttcaccatcaccatttatgacgctgagaagttaccaaaatgtccttctcaccaagtgatgcttttgtcatcttctccagctt  1567600                                                             --------->ANAC55(2)                                             <------ZmHOX2a(1)  ------->TEIL                                  --------->ANAC58           <---------ANAC55(2)                               *TSS        <---------TOE1(2) --------->ANAC58                             <---------HSFB2a(2) <---------AHL20(2)      <---------ANAC46                             --------->HSFB2a(2) --------->AHL20(2)      <---------ANAC58                <---------AHL20(2)--------->ANAC58           --------->ANAC58   --------->YAB1    <-----------GT1      <---------LBD16  <-----------GT1 -----DOF2   --------->TOE2(3) <---------At4g35610    ---------->DOF2    <---------ANAC58   tactctcatgaaatttcttaaattttctcttccagcaaacaatctcaggatttaaacaaagttacgcatcttctggcttcgagttgtttctagggtttca  1567700                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                             <---------ANAC46            <----------DOF2         <-------GAMYB            --------->At4g35610         <---------ARR11(3)        <---------MYB46(3)   --------->At4g35610         --------->ARR11(3)     --------->ALFIN1        <---------At4g35610                        <-     ---------->DOF2       <-------TEIL                 ----------->RAV1(2)  <---------TOE1(2)   <---   <---------YAB1   --------->DEAR3(1)                <---------RAP2.6(2)   ------>ZmHOX2a(1)    <---   ttgttatgaaagctctttaacaccgagggttcaagtgtggttagagagaaatgaattcggctgaggtgaatgtgaatcctagggtttttggtgatagttt  1567800                       --------->LBD16                      --------->HSFB2a(2)                      --------->LBD16         <---------HSFB2a(2)         --------->HSFB2a(2)   <---------DAG2     <---------HSFB2a(2)   <---------------AGL15                                                          <---------At4g35610   --------------->AGL15                                   ------>ZmHOX2a(1)      --------->ZAT14   <----------DOF2   <---------ANAC46                     --------------->AGL15   --------->At4g35610  <-----------------AGL2              <---------WOX13(1) ----------------->AG  --------->At4g35610  <-----------------AGL1            -------->HAHB4    <----------DOF2          <---------At4g35610  =========================================================================MADS_MADS  <-----------------AGL3           <---------ATHB12 <---------HSFC1(2)        <---------MYB46(3) --------MYB52(1)    <---------LBD16--------->ATHB12--------->HSFB2a(1)      <--------P ------ANAC58       <---------LBD16<---------YAB1   --------->HSFC1(2)      <-------GAMYB ------ANAC58       <------NtERF2  --------->ICU4<------NtERF2        --------->ATHB12          -----   cgttactttttctggcaatggctccgggaaatttgaaatgattgatcaggccgaagctttccttatggagcttgattcggttgctgcagacactggaagt  1567900                                                            ----------->GT1                                                 <---------ARR14(2)                                                 --------->ARR14(2)                                    --------->MYB52(1)  --------->ARR11(3)                          --------->HSFB2a(2) --------->ANAC46                          <---------HSFB2a(2) --------->ANAC58                      <---------GLK1(2)       --------->ANAC58        ---------->DOF2                    --------->MYB59----------->HVH21    <---------GLK1(2)                          <- ---->ALFIN1        <---------TOE2(3) --------->ZAT6    <---------ARR11(3)            --------->GLK1(2)   gatggaaatggaaatgtcgatttaggttctcgagtgtctaacagtgaaacggaacctagattttgtgaaatgaaaagagagattagagactctgatcacc  1568000                                                                <---------ARR11(3)                                                       --------->LBD16                                                      <---------HSFB2a(2)                                                      --------->HSFB2a(2)                                                   <---------ARR14(2)                           <----                   ------->TEIL                    --------->ARR14(2)                           <----                   <---------ARR14(2)             --------->GLK1(1)                             <----                   --------->GLK1(2)              <---------GLK1(1)                        <---------                --------->MYB46(3)               ----------->ARR10                   <---------YAB1       --------->At4g35610                  --------->DAG2      --------->ARR11(3)  <---------TOE2(3) <---------AHL20(2)--------->ARR14(2)     ---------->DOF2--------->SPL7        <---------ARR14(2) ---------DOF2  <---------MYB52(2)   ----------->GT1 <---------LBD16           --------->ARR14(2)   gattttatgagctctgcaacgaatctggtgagaagaaaatggagaaaaggcgagttccggactacaaatctttcttatccgaatttgacgattatgttgc  1568100  Previous    Next  AGI:  At3g05420.1    Description:  ACBP4 (ACYL-COA BINDING PROTEIN 4); acyl-CoA binding. similar to ACBP5 (ACYL-COA BINDING PROTEIN 5), acyl-CoA binding [Arabidopsis thaliana] (TAIR:AT5G27630.1); similar to Acyl-coA-binding protein, ACBP; Serine/threonine protein phosphatase, BSU1 [Medicago truncatula] (GB:ABN08040.1); similar to putative transcription factor [Oryza sativa (japonica cultivar-group)] (GB:AAR88580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17549.1); contains InterPro domain FERM/acyl-CoA-binding protein, 3-helical bundle; (InterPro:IPR014352); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-ty Range:  from: 1561784    to: 1567324    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g05425.1    Description:  unknown protein Range:  from: 1567480    to: 1567611    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g05430.1    Description:  PWWP domain-containing protein. similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G27650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17548.1); contains InterPro domain PWWP (InterPro:IPR000313) Range:  from: 1567631    to: 1571078    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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