Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <------NtERF2                       <------NtERF2                         --------->RAP2.6(2)                <---------RAP2.6(2)                         ----------->RAV1(1)                <---------ATERF1(2)                        --------->ATERF1(2)                --------->ATERF1(1)                        <---------ATERF1(2)     <---------At4g35610                        <---------DEAR3(1)      --------->At4g35610                       --------->ATERF1(1)     <---------ANAC58                      --------->LBD16          <---------ANAC46                      <---------RAP2.3(1)      <---------ANAC58 <----------DOF2                      <---------ATERF1(1)     <---------ZAT18<---------RAP2.6(3)                      ------>NtERF2        <-------GAMYB--------->ALFIN1                        -----                     <---------LBD16      --------->MYB55(2)<---------DEAR3(1)        ----------->RAV1(1)                     <---------RAP2.6(2)  <---------MYB46(3)--------->ATERF1(2)      ------->GAMYB  <                     <---------RAP2.3(2)  --------->MYB52(2)--------->RAP2.6(2)  ---------->DOF2<----                    <---------LBD16       <-----------RAV1(1)------>NtERF2--------->ZAT14       <----          <-----------GT1------>NtERF2  <---------MYB52(1)<---------ATERF1(1)   --------->WRKY18(1) < --------->DOF2 <----------DOF2 <---------REM1(1) ----------->HVH21     --------->ANAC46        -----   tttaaagtcgaatcacctcttttccggcggcataatgtagccgtttgttgcgctcacagtggccggctttatacactgaacgctcaagcgccagagtcag  1561400                                                      <---------ANAC46                                                      <---------ANAC58       ----------->GT1                                <---------ANAC58   <---------WRKY12                                 --------->ARR11(3) <-----------HVH21                                  <---------AHL20(2) ---->At4g35610                                 <---------AHL20(2) ------MYB46(1)                                 --------->AHL20(2)    ------>ZmHOX2a(2) -----At4g35610                                 <---------YAB1 ---------->DOF2    ----------->GT1 -----ZAT2                                     --------->AHL20(2)   <---------ARR14(2) ------MYB83             --------->ZAT6        <---------AHL20(1)   --------->ARR14(2) ---->ZAT2             <-----------GT1         --------->AHL20(1)  <------ZmHOX2a(1)           ------   cttggtcagaggtgaaatcggaaatttacactactgcgaaatcgttcaatataatttcttgaatgtaaaggatcggaaaacaaattgtaaaaacccaaaa  1561500                  ---------->DOF2               --------->ANAC58                                           --------->ZAT6            <               --------->ANAC58                                           --------->ANAC46          <      <---------ARR14(2)                                                <-----------GT1        ------      --------->ARR11(3)                 --------->ATHB12          <---------AHL20(1)         <------      <---------ARR11(3)                <---------YAB1             <---------AHL20(2)         -------      --------->ARR14(2)      <-----------GT1                --------->TOE2(3)     <---------At4g35610 ---->DOF2   ---------->DOF2<---------AHL20(2)      <----------DOF2--------->AHL20(2)      <---------YAB1   agaaacaagatactacaaagcaaagcttattttttcttcatattgatagggtctctttgtttttcttaattaattcacactattgagttgattacgatga  1561600                                                                                                 ----                                                                                               ------                                                                                              ------>MYB46(1)                                                                                        <---------ZAT18                                                                         --------->ANAC58     ------>MYB83                                                                         --------->ANAC58     -------                                                                      ------>NtERF2     --------->ZAT14                                        <---------ANAC58              <---------At4g35610     ------- ---------TOE1(3)                ---------->DOF2  <---------ICU4      --------->At4g35610     ------- ---------TOE2(3)         ---------->DOF2         --------->YAB1<---------ANAC58        <---------ZAT14 --->ATHB12             --------->AHL20(2)  --------->YAB1      ------>ZmHOX2a(2)     <xxxxxxxxxxxxxx ---YAB1                --------->YAB1  <---------ANAC58        <---------ANAC58<---------AHL20(2) -- -->ICU4         ----------->HVH21      <---------ANAC46  --------------------->WRI1  --------->ANAC46   ttaaggtcaaaaatacgaagtgacaataaaaagagaaaagtttcgagcataatcatgtcttcttgatcgtgccgctcgctatataaacactgcaccaagc  1561700                                                                            --------->YAB1                                                                            <---------ICU4                                                                    ---------->DOF2        <---------YAB1                                             <---------AHL20(2)      --------->YAB1                                           <---------AHL20(2)     <---------YAB1         --------->AHL20(2)                 --------->AHL20(2)  <---------YAB1            <---------AHL20(2)                 --------->AHL20(1) ----->WOX13(1)             <---------AHL20(1)         <---------TOE2(3)   --------->ICU4           - ------>CBF          <---------AHL20(2)             <---------AHL20(2)     <---------ATHB12         - -->ANAC58          <---------AHL20(2)             --------->YAB1 <---------AHL20(2)              --- -->ANAC46          --------->AHL20(2) --------->GLK1(2)      --------->AHL20(2)       ------->TEIL - -->ANAC58       --------->WOX13(1)    --------->ARR14(2)     <---------AHL20(2)    *TSS         ---- xxxxxxxxsmallRNA(se3)     --------->AHL20(2)   --------------->AGL15<---------TOE2(3)<---------CCA1(2) ------->ICU4  ------------>CBF        <---------ARR14(2)--------->YAB1    <---------YAB1       -----   aattactataatttttgatcaattaaatattaaattttgagaatatgtttctatattaatgaaaataatttaaagtaatcataagtttgtatctttgaac  1561800             --------->ANAC58             --------->ANAC58    <---------ANAC58       --------->LBD16 -------->ANAC58                 <---------ANAC58       --------->At4g35610 -------->ANAC58           --------->ATHB12             <---------LBD16 ------>MYB52(1)          <---------YAB1              <---------LBD16 -------->ANAC46        --------->At4g35610         --------->ARR14(2) ----->TOE1(2)          <---------At4g35610         <---------ARR14(2)                              - ---->MYB46(3)   <---------CCA1(2)              <------ZmHOX2a(2)           <----------ID1   --------   aaacgaaactagaaaacgcctatctctgctcattggcttctccatctccgatcaaatccgcggtcgtagtcagagagagagacaaatggctatgcctagg  1561900                                                                           <------NtERF2                                                                ------>ZmHOX2a(2)         <---------HSFB2a(2)                                                               <---------At4g35610   --------->TGA2(2)                                                              ------->TEIL<---------DEAR3(2)                                    <---------ZAT2            <---------AGP1        <-----------HVH21                    --------->LBD16 <---------At4g35610       <-----------ARR10     <-----------TGA1                  <---------LBD16   --------->ZAT2            --------->GLK1(2)    --------->ANAC58                 <-----------------AGL1  ------->TEIL         --------->ARR14(2)   --------->ANAC46        --------->PCF2           <---------At4g35610          <---------ARR14(2)   --------->ANAC58        --------->PCF5     --------->ARR14(2)      <---------DEAR3(2)    <---------At1g77200        <---------TCP20    <---------ARR14(2)     <---------DREB2C(2)    <---------DEAR3(1)         - --------->MYB46(3)--------->ANAC46 --------->At4g35610<---------HSFB2a(2)------>NtERF2   --------->HSFB2a(2) ------->P      -------->P <-----------ARR10   <-----------RAV1(1)     <-----------HVH21--------->At4g35610 ->STY1(1)    <----------DOF2   --------->ANAC46 --------->DDF1<------ZmHOX2a(2)  <-----------STF1 <-   gcaacctctggtcccgcttacccggagaggttctacgctgctgcatcttatgtcggtctcgacggatctgattcgtcggcgaaaaacgtcatctcgaaat  1562000           <---------ZAT14                                                                  ---------           <---------ZAT18                   <---------At4g35610                            <--------           --------->ZAT14                  --------->ANAC58                       <---------YAB1           --------->ZAT18               <-----------HVH21                    <---------At4g35610     --------->YAB1                  <---------ZAT2                          <---------ARR11(3) --------->LBD16                     --------->ZAT2            ------>ZmHOX2a(2)  <---------TOE1(2)<- -------->LBD16               <----------DOF2--------->At4g35610             --------->ARR11(3)   <-- --------LBD16             --------->ANAC46 --------->ANAC58  --------->GLK1(1)------>ZmHOX2a(2)  <--   tccccgatgatactgcactacttctctatgcgctataccagcaggtcagcaacttccatttctgatctcttccattgttgatctcacgattgtggatttt  1562100                            <---------ANAC46                            <---------ANAC58                      <---------MYB46(3)                 ------>ZmHOX2a(2)                --------->CCA1(2)                <------ZmHOX2a(2)               --------->ARR14(2)               <---------ARR14(3)               --------->AGP1               <---------AGP1 --------->ALFIN1               <---------ARR14(2)         <-----------GT1<---------MYB52(1) >ARR14(2)     --------->ARR14(3)                                                      --------->ARR14(2) -ARR14(2) --------->ANAC46 <---------ANAC58               --------->YAB1       <---------YAB1      - ---------DOF2 --------->ARR11(3)       --------------------->WRI1          --------->ARR14(2)      - -------ANAC58 <---------ARR11(3)       <----------DOF2   <-------TEIL   --------->DEAR3(1)      ---- -------ANAC58<---------GLK1(1)<-------GAMYB       <-----------GT1 ------>ZmHOX2a(1)   <---------ARR14(2)   gcttttgaatttcacgagatctggtcgtttgggtgttgatttctttgttttagtcaccgattcatattcctctcgccgaattcttatcggattttagaaa  1562200         <---------ANAC58                                                                  ------>ZmHOX2a(2)         <---------ANAC58          <---------MYB52(1)                                     <------ZmHOX2a(2)      --------->ZAT14             <-------GAMYB      ----------->GT1                     <---------ARR11(3)     <----------DOF2             ------>ZmHOX2a(2) <--------P                            --------->ARR11(3)     <---------DAG2              ======================HOX2a_HOX2a                       <---------ARR14(3)   ------->TEIL             <----------DOF2     --------->LBD16                          --------->ARR14(3)  <---------ALFIN1         <---------ANAC58     ------>ZmHOX2a(1)                    --------->LBD16 -------->ANAC58           <---------ANAC58  <------ZmHOX2a(2)                       --------->ANAC46 -------->ANAC58     --------->At4g35610    <---------ARR14(2)         ----------->GT1--------->LBD16 ------->HVH21       <---------At4g35610<-----------GT1  <----------TaMYB80      <-----------GT1  <--   tgacgcactttacttgtctgattagctgtgcttgatcgttattttcgatcctggttagtatattcgaaatgctcagtaaaatgttacccgagatctcatc  1562300  Previous    Next  AGI:  At3g05420.1    Description:  ACBP4 (ACYL-COA BINDING PROTEIN 4); acyl-CoA binding. similar to ACBP5 (ACYL-COA BINDING PROTEIN 5), acyl-CoA binding [Arabidopsis thaliana] (TAIR:AT5G27630.1); similar to Acyl-coA-binding protein, ACBP; Serine/threonine protein phosphatase, BSU1 [Medicago truncatula] (GB:ABN08040.1); similar to putative transcription factor [Oryza sativa (japonica cultivar-group)] (GB:AAR88580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17549.1); contains InterPro domain FERM/acyl-CoA-binding protein, 3-helical bundle; (InterPro:IPR014352); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-ty Range:  from: 1561784    to: 1567324    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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