Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              >>>>>>>>>ARR2                                    --------->ANAC58           --------->ATHB12                                  --------->ANAC58          <---------YAB1                                     --------->ANAC55(1)        <----------DOF2  <-----------RAV1(1)                 --------->ANAC46 --------At4g35610   <---------ARR11(3)                     --------->LBD16 ------->At4g35610   --------->ARR11(3)                     <---------LBD16 --------ZAT2        <---------ARR14(2)                    --------->MYB52(1) ------->ZAT2      ----------->ARR10                      ------->GAMYB -----At4g35610 <---------ANAC46               <---------AtLEC2                                   ---   ctgctgacttctttgattgtgtagatattgttgcaagtgtcttcgttttgcaagaagtaacccacggaatggaatcggtagagacatgagaggctcacag  1547900                                                                                                -----                                                                                                <----                                                                                                <----                     <---------ANAC58                                                           <----                     <---------ANAC46                                                          ------                     <---------ANAC58                                                          <-----                <---------At4g35610                                                            ------                --------->At4g35610                                                            <-----             ------>ZmHOX2a(1)                                                               <-------            --------->TOE1(2)                               <------NtERF2                 <---------WRKY18(1)            --------->TOE2(3)                 ------>ZmHOX2a(1)                    ------>ZmHOX2a(1)           --------->YAB1           <---------MYB52(1)    <---------LBD16      --------->ARR14(2) ------>YAB1--------->TOE2(2)  ------>ZmHOX2a(1)         --------->RAP2.6(3)   <---------ARR14(2)  <-   tgatcaccagtaatcctaagatgacttgtaatcctgccattagtcttcctaatcgccatctcggcaaacatgttcttcccatttcctcttcttgaccaaa  1548000      --------->ATHB12     <---------MYB52(1) ---->ARR14(2) -----ARR14(2) -----ARR11(3) -----ARR11(1) >MYB46(1)                                       ------->TEIL ----CCA1(2)                                     --------->GLK1(2)                 --------->MYB52(1) >MYB83                                         <---------CCA1(2)      <---------ARR14(2)           - ----ARR14(1)                               ----------->GT1            --------->GLK1(2)         <--- --MYB59                                ---------->DOF2                --------->ARR14(2)----------->GT1 ---------DOF2     <---------ICU4      <------ZmHOX2a(1)    <---------YAB1 ----------->GT1<------ZmHOX2a(1)   tctttcagttattggttctaattttgacataagaaaacagaggaaagtgtgaatcttttgtcatgcttcagagaatatggaaaaaaaacagaggaaaata  1548100                                               <---------ARR14(2)                                               <---------ARR11(3)                                               --------->ARR14(2)                                               --------->ARR11(3)                                         --------->ANAC58                                         --------->ANAC58      --------->At4g35610              ---------->DOF2                            <---------ICU4      <---------At4g35610             ------>ZmHOX2a(1)  --------->ANAC55(2)     --------->ICU4  --------->TOE2(3)           <-----------GT1  <---------ARR11(1)                <---------YAB1 ------>TEIL   <-----------GT1--------->MYB52(1)         <---------ANAC55(2)    --------->TOE2(3) ------YAB1   --------->AHL20(2) ------->GAMYB<---------CCA1(2)     ---------->DOF2  <-----------GT1   tgaatcttagctcaaattaactaaacagagaataacgctcctaaagccaaatcttgaataagtgataagtgaaagaaaaaaacattattaccagataaga  1548200                                                                                                  ---                                                                        <-------TEIL            -----                                      <---------ANAC58     --------->DAG2                    --------                                  <---------DAG2          ---------->DOF2                    --------       --------->CCA1(2)<---------YAB1<---------ANAC58  <------ZmHOX2a(1)--------->YAB1<-----------GT1   attaagaagagatgctccttgatgttttgatggaaacctttcgtctctggtgtctcgaggaaaagtagaagagattcatgagtttgttttttcaacctca  1548300                                    --------->LBD16                                   <---------ANAC46                                  <---------LBD16                                  --------->At4g35610                               --------->ZAT2                               --------->At4g35610                                    <---------ARR11(3)                               <---------At4g35610                                    <---------ARR14(2)                               <---------ZAT2                                  --------->ZAT2                           --------->LBD16                                     --------->At4g35610                         ------>ZmHOX2a(2)                                     <---------ZAT2      --------->ANAC46  <------ZmHOX2a(2)                                     <---------ARR14(2)      *TSS              --------->CCA1(2)                                     --------->ARR14(2)      --------->ANAC58 --------->ARR14(2)                                  <---------ANAC55(2) <-----      --------->ANAC58 <---------ARR11(3)                                  --------->ANAC55(2) ------  ---------->DOF2      --------->AGP1                                     <---------LBD16<---------ANAC55(2) -------->GT1          --------->ARR11(3)              <---------ANAC46  --------->MYB52(1) --------- ----->DOF2            <---------ARR14(2)     --------->ALFIN1        <---------ICU4  --------->ARR14(2) ->TOE1(3)            --------->GLK1(1)    --------->DAG2       <----------DOF2<---------At4g35610 ->TOE2(3)            <---------GLK1(1)   ---------->DOF2     --------->At4g35610     --------->ARR11(3)   aagttaaaacgctatttgaaatagagatccgagagctgcggagaaaaagtgtgtgttttgtgtctgcttgaagaattacggagctggagatacttaaagc  1548400                                                                    <---------MYB59                                                                  ------->TEIL                                                                <-------MYC3                                                                <-------MYC2                                                                ------->MYC2                                                                ------->MYC3------>ZmHOX2a(1)                                                               --------->TGA1a                                                               ============================bZIP_DOF                                                               <---------TGA1a                                                               ============================bZIP_DOF                                                              ------>MYB83 <---------ANAC58        <---------At4g35610                                   ------>MYB46(1)     ---------->DOF2                    <---------ARR14(2)  --------->DEAR3(1)  <---------DAG2 ----At4g35610                          --------->ARR14(2) --------->MYB46(3)   <----------DOF2 --->At4g35610                    <------ZmHOX2a(1)   <----------DOF2      <---------ANAC58 ->DOF2 --------->At4g35610      <----------ID1       ===================bZIP_DOF   tgaagcctaaagctgacttattgtgactaagttttaggacaaaatccacaaactctctttcaccaacgtgcctaattccttacttttcggtgttcttctg  1548500                         --------->TOE2(3)                         --------->YAB1                         --------->AtMYB61                         --------->TOE1(3)                                         ----------->GT1                      --------->WOX13(1)                                       --------->AHL20(1)                     <---------WRKY12                                          <---------AHL20(2)         <---------AHL20(2)                             <-------TEIL           --------->AHL20(2)         <---------YAB1 --------->MYB46(3)             --------->AtLEC2       --------->AHL20(2)        <---------AHL20(1)                <---------AHL20(2)                  <---------AHL20(2)        --------->AHL20(2)   <---------At4g35610    ------>MYB83     <---------AHL20(2)        --------->AHL20(1)   --------->At4g35610    -------->P      --------->AHL20(2) <----------DOF2---------->DOF2     ----------->GT1 ------>MYB46(1) <---------AHL20(2)           ----   tgtctttgaatataattcaaaagtcaaccatagctgataagtatataatataccaacatgcatacttaaattttttttaaaaaaattgttaaatataaga  1548600                                                                                                 <---                                   <----------DOF2                    ------>MYB83               <---                              <----------DOF2                     ------->TEIL                   ----                      --------->ARR11(3)                       --------->AtLEC2          <-------TEIL           --------->DAG2    <---------ANAC58              --------->ARR11(3)           --------->GLK1(2)          ---------->DOF2<----------DOF2             --------->MYB52(1)                 --------->CCA1(2)       <---------ANAC55(2)   <---------ANAC58      <---------MYB52(2) ------>MYB46(1)  --------->ARR11(1) ----->ZAT18          <---------ARR11(3)<---------ZAT6     <---------ARR11(3)        ----------->ARR10   gcacaaatctcgtaaagttgttaagaactttgctttgctatagtggaaaacaaactaacaatatcatgcaccttccaaattgaagaagagattcgaggca  1548700                         <---------DOF5.7(2)                         ------------>AtMYB77                         --------->MYB52(1)                        <---------WRKY38(1)                        <---------WRKY12                       --------->DOF5.7(2)                      <-------GAMYB <---------DEAR3(1)                    <---------DEAR3(1)                    <---------TOE2(2)                 --------->ANAC46--------->TCP20                 =====================MYC_MYB                 ======================MYC_MYB                 --------->TGA1a<------MYB83                 <---------TGA1a<------MYB46(1)                      <------MYB46(1)                 =============MYC_MYB <-------GAMYB                  <------MYB83           --------->ANAC58   <---------MYB52(1)           --------->LBD16                          <        --------->DEAR3(1)    --------->ALFIN1           --------->HSFB2a(2)                 <-------     --------->ANAC58<---------MYB46(3)                  <---------HSFB2a(2)                 --------     --------->ANAC58<---------DEAR3(2)         <---------MYB52(1)  --------->MYB59         --------- ------At4g35610 =============MYC_MYB----------->GT1    <---------LBD16     <---------HSFB2a(2)     < ---NtERF2 --------->ANAC58 <---------MYB46(3) ----------->GT1      <---------AtMYB61<--------P    <- ----->At4g35610--------->SPL7<--------P   <-----------GT1--------->LBD16   --------->HSFB2a(2)    --   gaggcagacgcagacgcatacgtcggttaacggttgggccggttataaccggtatatttcccgaagaagtttggtcttctcgacctggttgctaaccatt  1548800  Previous    Next  AGI:  At3g05390.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17562.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77378.1); contains domain SSF53335 (SSF53335); contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 1546449    to: 1548306    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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