Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->ARR14(2)      <---------ARR14(2) ---------->DOF2 ---NtERF2                                       --------->TOE2(3) ------>GT1                                   --------->ANAC46 ---->LBD16                                 --------->MYB46(3)           ---------->DOF2            < -->At4g35610                               <---------MYB52(2)       <------ZmHOX2a(1)            --- ---LBD16              --------->GLK1(1)  <-----------GT1           <----------ID1            ------- -DEAR3(1)--------->At4g35610      ----------->GT1                 <---------TOE2(3)         --------   gaaaaaaggaactgctcccttcatgaattccaaagtcttgtaaataacaaaccacaaactacaatatttaaggacaaaaggagacacaatttagaaggtt  1529900                                                                                             --------                                                                                             --------                                                                                            <--------                                                   <---------At4g35610                    ------>MYB46(1)      <---------ANAC58                             --------->At4g35610          --------->LBD16      <---------ANAC58                  <------NtERF2                          <---------LBD16<------NtERF2 <---------ICU4                       --------->RAP2.6(2)                     --------->MYB52(1) -------->HAHB4                       --------->RAP2.3(2)                  --------->ATERF1(1)------- --------->YAB1                      --------->RAP2.3(1)                 <---------PCF2   ------>MYB83 ---------YAB1          ------>MYB46(1)------>NtERF2                <---------ANAC46      -------->P ------>YAB1            ------>MYB83<---------ATERF1(1)             --------->DEAR3(1)    --------->ZAT2 ---->GT1               -------->P<-----------RAV1(2)            --------->ANAC46--------->LBD16 --->GT1     ----------->GT1     ----------->RAV1(2) --------->GLK1(1)--------->ALFIN1  --------->MYB46(3)   taataatagcttacagggtcaataccaactcttccaccaggcgccaaaacatcagctatccattcactcgccgtggggactcccggattaccagcccgca  1530000                                <----------DOF2                             ------>NtERF2                             --------->LBD16                            --------->ANAC46  --------->GLK1(2)        <---------LBD16  --------->ARR14(2)   <----------DOF2     --------->ATHB51  <---------ARR14(2)  <---------ANAC58     <--------ATHB1                                           - ->ANAC58             <---------ANAC58     --------->ATHB12                --------->GLK1(1)       <- ->ANAC58          <---------WOX13(1)      <---------ICU4              <---------ALFIN1           --- -ZAT18         <---------AHL20(2)        <---------YAB1       --------->ANAC58                   --- -->LBD16       --------->AHL20(2)        --------->ICU4       --------->ANAC58 <----------DOF2  ----   tgagaatccaactagagtttaattgcttctccgcctttgatagaataattgcagagaatgtagataagaaactccacatttcctttcaatatgagatggc  1530100           ---------->DOF2     --------->AHL20(2)    --------->AHL20(2)                                          --------->At4g35610    <---------ATHB51             --------->TOE1(3)  --------->At4g35610    --------->TOE2(3)    <---------AHL20(2)  -------->HAHB4          ------>NtERF2---------->DOF2                      <--    <---------ATHB12    --------->YAB1         --------->RAP2.6(2)   <---------DAG2        <---------SPL7 -------->AHL20(2)     <---------YAB1         <---------RAP2.6(2)  ------>NtERF2         ------------ --------ATHB12        --------->ICU4        --------->RAP2.6(3)<---------At4g35610     --------->At4g35610 ------>ANAC58       <---------ICU4          --------->At4g35610<---------ZAT2     <---------bZIP60(1) ------>ANAC58       --------->YAB1         --------->MYB52(1)  --------->ZAT2     --------->bZIP60(1) ----->WOX13(1)<------ZmHOX2a(1)----------->RAV1(2) <---------At4g35610  <---------YAB1------->GAMYB   aatcaaataattttaaaggacgataatgatcaaaacctgaagaaaatagcggccatctgtccatagagctgccttatccttggtgacaacagcggtacca  1530200                                                                                                -----                                                                                           --------->ANAC58                                                                                           --------->ANAC46          <---------ARR14(2)                                                           --------->ANAC58          --------->ARR14(2)                                                           --------->ANAC46    <---------HSFB2a(2)      <---------ZAT2                                ----------->GT1 --------->ANAC58    --------->HSFB2a(2)      --------->ZAT2                       =================================== -------ALFIN1               ----------->RAV1(2)               *TSS      ----------->GT1 ---------->DOF2 --->AtSPL3   ------>ZmHOX2a(1)------>ZmHOX2a(1)    ------->TEIL  <---------------AGL15--------->ANAC58   gcacttccagtaaatcctgatatataagccctcctggcatagcactctgcgatgaactcgctctagtacaaaatatggagaaaaatcacactcaagccat  1530300                                                                                     --------->TOE2(3)                                                                                    --------->REM1(1)                                                                                  ----------->RAV1(1)                                                                               --------->ANAC58                                                                       <---------AHL20(1)                                                         <---------ICU4--------->AHL20(2)                                                         --------->MYB52(1)    --------->ANAC58                       <---------------AGL15       <----------DOF2     --------->ARR11(3)                     <-------TEIL       --------->AHL20(2)             <---------ARR11(3)           -     <-----------RAV1(2)      ----------->GT1     <---------ANAC58     <---------AHL20(2)    <------- ---->AtLEC2    <---------TOE2(3)     --------->TOE2(3) ------>ZmHOX2a(1)      --------->ANAC46------ ======================================MADS_MADS  <---------ANAC58     --------->AHL20(1) <---------MYB52(1)   gaaaaactcaggcagtttatggatacatttagaagtaaaacataaatttgtgactttcctaatggcacagaaatatattacaggcaacatcagttatgaa  1530400                                                                                               <-----    =================HOX2a_HOX2a                                                              -------    ------>ZmHOX2a(2)                                                                         -------   ==================HOX2a_HOX2a                                                              <------   <------ZmHOX2a(2)                                                                         --------  <---------AGP1                                                                             --------  <---------ARR11(3)                                                                         --------  --------->ARR11(3)                                                                         <-------  --------->ARR14(2)                                                                      ------->GAMYB  <---------ARR14(2)                                                                     --------->MYB46(3) <---------CCA1(2)                                         ----------->GT1              -------->P ---------->ARR10  ----------->GT1                      <---------ICU4                 ------->GAMYB --YAB1  <---------At4g35610                         --------->YAB1                   --------->MYB46(3) ---->DOF2    ------>ZmHOX2a(1)--------->ANAC46   <---------CCA1(2)             <-------TEIL<--------   agtagatcttaagctcctagtatgtaaaattcaccgaaacaacacattacccatatcaaaatggcaaaaacaattgcatagatgcataacaacccccgca  1530500                                                                               <---------At4g35610                                                                               --------->At4g35610                                                                           <-----------HVH21                                                                          --------->ALFIN1                                                                        --------->O2                                                                        <---------ANAC55(1)        --------->YAB1                                                  <---------bZIP60(2) ----ALFIN1                                                             <---------TGA1a -->ZAT14                                             <---------LBD16   --------->TGA1a -->LBD16                                        --------->ZAT14        <---------ANAC46 ---ZAT14                                        --------->ARR14(2)     ============================= ->ANAC46                    ------->TEIL     <------MYB83              <---------ANAC58 ->ANAC58     --------->AHL20(2)          --------->ARR14(2)            <---------O2            <---- ->ANAC58     <---------AHL20(2)          <---------ARR14(2)            <---------ANAC58     <------- --ALFIN1  <---------ICU4   <---------GLK1(2) <------MYB46(1)       <---------WOX13(1) --------->ANAC58 -LBD16<---------ATHB12     <---------CCA1(2)--------->MYB59      --------->ATHB12     --------->ANAC58   ctggtccaaatcatatttattttttatcttgaatctccaaatcgaatttggtatactcagggacagcaagattgacgtgtgagcggagcaagaaactttg  1530600                                                       <---------ARR14(2)                                                       --------->ARR14(2)     --------->AHL20(2)                                --------->ARR11(3) ===bZIP_DOF                                           <---------ARR11(3) -----LBD16                                      >>>>>>>>>TBF1                              <-------- ---DOF2  --------->AHL20(2)        ----------->GT1 >>>>>>>>>TBF1                      ------>ZmHOX2a(1)   gggagaatgaaataaaacacgagttggagaatttcatactgtgatttagaagaagaagaacttccatttggctctacaattgaaacatcctcttatgaca  1530700                                                                    ---------->DOF2                                           ----------->RAV1(1)     --------->AtMYB61        ---------                                           ------>MYB46(1)  <---------ARR14(2)             ----------                ----------->GT1            ------>MYB83     --------->ARR14(2)          --------->TOE2(3)     --------->CCA1(2)                   ------->GAMYB --------->ARR11(3)       <-----------GT1  ----------->ARR10   <---------ARR11(3) --------->MYB46(3)--------->At4g35610<---------ANAC58  -----  <---------TOE2(3)   --------->GLK1(2) --------->ANAC46<------ZmHOX2a(2)     <---------ANAC58 <----- -YAB1        <------ZmHOX2a(1) ------->TEIL           <---------ARR11(3)  <---------MYB52(1)--------   agttgagatttgactaggaagaaaaatctgaatgcattttcaacccaacatatagaagatcagataccaccaaagccgtttcttacaataccataaagta  1530800  Previous    Next  AGI:  At3g05350.1    Description:  aminopeptidase. similar to ATAPP1 (aminopeptidase P1) [Arabidopsis thaliana] (TAIR:AT4G36760.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82623.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17598.1); similar to hypothetical protein OsI_024400 [Oryza sativa (indica cultivar-group)] (GB:EAZ03168.1); contains InterPro domain Peptidase M24, catalytic core; (InterPro:IPR000994) Range:  from: 1526969    to: 1530263    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g05360.1    Description:  disease resistance family protein / LRR family protein. similar to disease resistance family protein / LRR family protein [Arabidopsis thaliana] (TAIR:AT1G71390.1); similar to disease resistance family protein / LRR family protein [Arabidopsis thaliana] (TAIR:AT1G71400.1); similar to disease resistance family protein [Arabidopsis thaliana] (TAIR:AT3G05370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23757.1); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 1530741    to: 1533294    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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