Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ===                                                                                                 ----                                                                                                 <---                                                                                                 ====                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                -----                                                                      --------->ARR11(3)        <----                        ---------->DOF2                              --------->CCA1(1)          -----                       --------->AHL20(2)                            --------->RVE1(1)          <----              <---------YAB1                            <---------AHL20(2)                      <----           --------->GLK1(2)        <----------DOF2     --------->AHL20(2)                      -----          <---------ARR14(2)    --------->ZAT14         <---------AHL20(1)                    -------          <---------GLK1(2)     <---------ZAT14<---------ICU4----------->GT1           <---------ANAC58          --------->ARR14(2) ----------->GT1 --------->GLK1(2)   --------->AHL20(2)    <---------ANAC58 <---------ANAC58  <---------AHL20(2)   <---------YAB1  --------->AHL20(1)       ==================== <---------ANAC58 --------->AHL20(2)<---------DAG2     --------->AHL20(2)        ------>ZmHOX2a(2)---   ggagcgtttgcaaattctgataaaattaaagcagtaaactttatgctaatctttgtattaaattggataaaataccttgttgatcgtttccttgagaaga  1521100 ================HOX2a_HOX2a ----->CCA1(2) ---ZmHOX2a(2)      --------->AtMYB61 ================HOX2a_HOX2a -----AGP1<------ZmHOX2a(1) ---->ARR11(3)      <---------ALFIN1 -----ARR14(3)     --------->MYB46(3)              <---------ANAC58 ---->ARR14(3)   --------->AtMYB61               <---------ARR14(2)                 <---------GLK1(2) -------ARR10<------NtERF2<---------ALFIN1     <---------ANAC58                  <---------AHL20(2) ---->GLK1(2)--------->ATERF1(1)               <---------ANAC58                  --------->AHL20(2) -----ARR14(2)   <---------ALFIN1         <---------ANAC46                     <----------DOF2 -----ARR11(3)   --------->DEAR3(1)       <-----------RAV1(1)          <---------AHL20(1) ---->ARR14(2)  <------NtERF2        <---------At4g35610   ------->GAMYB<---------AHL20(2) ---->ARR10 <---------ATERF1(1)   <---------At4g35610     --------->MYB46(3)<---------AHL20(2) ================HOX2a_HOX2a <----------DOF2--------->ALFIN1           --------->AHL20(1)         <-- --->ZmHOX2a(2) --------->MYB46(3)------>ZmHOX2a(1)<---------ANAC58   <---------AHL20(2) --------->ZAT6   tctgagttgagaggaggcaccaccatcgccactttcctctgcttctgtggggttcttgcaaccatcttctatatatattttctttaaattctcactagat  1521200                                                                                   ------>ZmHOX2a(2)                                                                                 --------->ARR14(2)                                                                                 <---------GLK1(2)                                                                                 --------->ARR11(3)                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(3)                                                                                 <---------ARR14(3)                                                                                 <---------ARR11(3)                                                                                 --------->AGP1                                                                               ----------->ARR10   --                                                                        --------->ANAC46           --                                                                      ------>MYB83<------ZmHOX2a(2)--                                                   --------->ANAC58   ------>MYB46(1)        --------                                                   --------->ANAC58 --------->AtMYB61 --------->ANAC46 ---------GT1                              ---------->DOF2         --------->MYB46(3)------>ZmHOX2a(1)   taacccaaaaacttctctctgtttgaaaactgggttttgaagataaaaagctcaagcctttgtaagaaaaccacccataacaagatcctcacaacagctt  1521300                                                                                                    -                                                                          <---------ANAC46     ------                                                                        --------->MYB52(1)     ------                                                                       <---------ARR14(2) --------->ANAC46          <---------GLK1(1)                                         <---------TOE1(3)   ---------->DOF2          --------->GLK1(1)                                    <----------DOF2     ------>MYB46(1) <-         <---------GLK1(2)                                  --------->ARR11(3)    ----------->RAV1(1) ------->ANAC58                                          <---------GLK1(2)<---------ANAC55(2)  <----- ------->ANAC46                                 <---------ATHB12    <---------TOE2(3)--------->TOE2(3) ------->ANAC58                               --------->WOX13(1)    --------->MYB59------>MYB83<----- ->At4g35610                <----------DOF2------>ZmHOX2a(2)<---------ARR11(3)   --------->AtMYB61 --   caagaaacccagatttctctctcactctctctttccttctctcgatctcaatcactctagaatgtctttttaggttacggacaccaacataaacgcgaat  1521400                        <---------ANAC46                      <---------ZAT14                      <---------At4g35610             ----------->GT1                      --------->At4g35610            --------->DAG2                                 *TSS -------->ARR14(2)  <---------ZAT14                 ---------->DOF2     --------->At4g35610        <- --->ARR14(2)       --------->ZAT18              --------->ANAC58       <---------At4g35610        <- --->GLK1(2)       <---------ANAC58              --------->ANAC58  --------->ANAC58                -- --------CCA1(2)   <---------ANAC58              ----------->GT1   --------->ANAC58               --- ------ARR10   <---------ANAC58             --------->ETT(1)      <---------LBD16           --------- ----ARR14(2)  <---------ANAC58        <---------ANAC58       --------->MYB59              ---------- ---->ZmHOX2a(1)   <---------ANAC46    <---------ANAC58   --------->WOX13(1)         <---------At4g35610   cctatcttcgatttgggtcttgtgtgctgtgtctatttgggtcttgtcggaacgtaaagtcaattaggcacgggaactgagagagagagcggataaaggt  1521500                 <----------DOF2                ------>ZmHOX2a(2)                <---------HSFB2a(1)               <------ZmHOX2a(2)              ------->TEIL              --------->ARR11(3)              <---------ARR11(3)             <---------ARR14(1)    <---------AHL20(2)           <------------MYB.PH3(1) --------->AHL20(2)         --------->MYB52(1)   --------->AHL20(2)                                       <----------DOF2      <---------ANAC58        <---------AHL20(2)                                      <--------------      --------->YAB1<---------ANAC58        <---------AHL20(2)                     --------->GLK1(1)      --------->ANAC55(2)    --------->AHL20(2)   ---------->ID1               <------------MYB.PH3(1)   <----------DOF2  <---------ANAC58    <---------AHL20(2)                    --------->RAP2.6(3) --------ZAT18<-----------ARR10    --------->AHL20(1)                        --------->MYB52(1) --------ZAT14--------->ARR14(2)   <---------AHL20(1)                     --------->YAB1 ------->ZAT18<---------ARR14(2)  --------->AHL20(2)                     --------------->AGL15    <-- -------------------->TaNAC69(2)  <---------AHL20(2)  --------->MYB52(1) ============================ >DAG2<---------ANAC55(2)<---------YAB1<---------AHL20(2)------->GAMYB   <---------------AGL15    <-- >DOF2<---------ANAC58<---------MYB52(1)--------->AHL20(2)              <-----------------AGL1    ---   gttcactttcgtaacggatctttcgttactatttaattttatttatttttttgtcccaacggtctaatacgcttactcataacggctatctttttttagt  1521600                                                          --------->ALFIN1         <---------MYB52(1)                                                      <---------ANAC58            <-------GAMYB ---AGL3                                              <---------ANAC46     <---------MYB52(1) -------ANAC58       --------->YAB1                   <---------ANAC58     --------->DOF5.7(2) ===MADS_MADS<-----------GT1                         <-----------------------TaNAC69(2)          <--- -------ANAC58  <----------DOF2                     --------->ZAT18       <-----------HVH21     <---- ------>ALFIN1  <---------DAG2          <---------ANAC46--------->ALFIN1  <---------RAP2.6(3)  <-----   gtgtgtgagccaattttactttataatcttcaaactaaattggtgtgaatttagtggcctgtgggactacatgagccgttagcccgttatgtagtatttt  1521700                                                                                                    <                                                                                                   -- <---------AHL20(2)                          <---------HSFB2a(2)                          --------->ARR11(3) ------AHL20(2)                              <---------HSFC1(1)                           <---------ARR11(3) -----YAB1                                   --------->HSFB2a(2)              <----------DOF2      <- ----AHL20(2)     ----------->GT1  --------->ZAT6                 --------->GLK1(2)  --------->TOE1(2)   tatttttttgaactccaaaattgtaaatgccaaattatctctagggtctagaagattaatcttgggagaatttttctaagctttgaacataagatttcaa  1521800                                                                                      --------->At4g35610                                                                                      <---------At4g35610                                                                                     <---------ARR11(3)                                                <---------AHL20(2)                   --------->ARR11(3)                                           --------->AHL20(2)              <---------ANAC55(2)                                           <---------AHL20(1)              <---------bZIP60(1)                                           <---------AHL20(2)              ----------->GT1                                       <---------AHL20(2)                  <---------ANAC46                                      <---------ARR11(3)                   --------->ANAC55(2)           <---------AHL20(2)         <---------AHL20(1)                  ----------->STF1 ---------AHL20(2)                   <---------CCA1(2)                   <---------TGA2(2)        --- ------->AHL20(2)       <---------YAB1--------->ARR11(3)      --------->TOE2(3)---------->DOF2 ====== --------AHL20(2)  <---------ICU4<---------ANAC46    ---------->DOF2    ----------->TGA1       <-----   attttttttttttttaattcaacattactataacttcgtatatattttattttttcaaagtaaacctctaaacaatgacgtaaaagagagcttccttctt  1521900                     <---------TGA1a                     <---------At4g35610                     --------->At4g35610                     --------->TGA1a                     <---------ANAC55(2)                     =================bZIP_DOF                     --------->ANAC55(2)                     =================bZIP_DOF                     --------->O2                     <---------O2             <---------ATHB12  <---------AHL20(2)       <-----------GT1 ----------->HVH21  <----------DOF2  ------------->DYT1  =============================bZIP_DOF ------->ID1------>MYB83   <---------DAG2               <---------ZAT18                           --- ==============================bZIP_DOF         <-----------GT1                                 >>>>> -----DOF2  ------>MYB46(1)<----------DOF2 <----------DOF2         <---------MYB46(3)        <-------   ttccctttaaaaccaatcgagtcatgtgactttttatttgaatgcctttttaacttagttccctcattgtggttcaactcttactaaacatcgacatatc  1522000  Previous    Next  AGI:  At3g05330.1    Description:  ATN/ATTAN (TANGLED). similar to peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis thaliana] (TAIR:AT4G32420.1); similar to peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis thaliana] (TAIR:AT4G32420.2); similar to microtubule binding protein [Cucumis melo] (GB:ABR67412.1) Range:  from: 1518888    to: 1521500    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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