Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->ANAC58                                            --------->ANAC46                                          ---------->DOF2                                      <---------ANAC58                                      <---------ANAC55(2)                                      --------->ANAC55(2)                                      <---------ANAC58                                     --------->SPL7                                     ------->TEIL                                     <-------TEIL                                   --------->TOE2(2)                                   --------->TOE1(2)                                   <---------SPL7--------->ANAC58                                 <---------TOE1(3)                                 <---------TOE2(3)                                 <---------------AtSPL3      <---------At4g35610        --------------->AtSPL8                                      ------>MYB46(1)  --------->ARR14(2)             <---------------AtSPL8                                    <---------MYB59  <---------ARR14(2)             --------------->AtSPL3                                   --------->ANAC55(2) ----NtERF2                   --------->DOF5.7(2)<---------ALFIN1                     <---------DAG2 -->ANAC58                  --------->TOE2(3)    --------->ANAC58          ----------->HVH21 ------>MYB83 -->ANAC46           ------>ZmHOX2a(1)<---------ANAC46            <-------TEIL        <----------DOF2 -->ANAC58        ---------->ID1<---------DOF5.7(2)        ------>ZmHOX2a(1)    <---------ALFIN1----- >MYB52(1)    <----------DOF2<----------DOF2--------->ANAC58      --------->ZAT18     ===============   agcgtttcttctgcgtctttgtcctctctacctttaacgtacgtgaaagccacgctcgctccttcaagtgcatagcagtgacacactgctttacctatcc  1498600                         <----------DOF2                      <---------ALFIN1               =====================bZIP_DOF               =====================bZIP_DOF               <---------TGA1a               --------->O2                                                         --------->DAG2               <---------O2                                                        ---------->DOF2            ----------->HVH21                                                 ----------->GT1           <-----------HVH21       --------->LBD16                            <---------ANAC46          ------>ZmHOX2a(1)       <---------ANAC46                          <---------ANAC46        ----------->RAV1(2)   <---------ANAC58   <---------ARR11(3)       <------MYB46(1)       ------>ZmHOX2a(1) <---------DAG2      ---------->DOF2              <------MYB83 ------>RAV1(2)--------->TGA1a<---------ANAC58<---------TOE2(3)          --------->MYB111(2)      <-- ========================bZIP_DOF<---------LBD16 --------->ARR11(3)      --------->MYB111(1)      ---   ctgagtctcctcctgtcacgagtgccacttttccctgcggataattttaaagataccttgtattacaagtagaagtaggtgtgtataaagggcaagtttt  1498700                                                          --------->TOE2(3)                                                        <---------YAB1                                                     --------->AHL20(2)        ------>ZmHOX2a(1)                           <---------WOX13(1)        <-----------HVH21                     <---------ARR11(3)       --------->TOE2(3)                      --------->ARR11(3)       --------->TOE1(3)                     --------->GLK1(1)    <---------ARR11(3)                       <---------CCA1(2)    --------->ARR11(3)                       <---------GLK1(1) --------DOF2                           --------->At4g35610               --------->MYB52(1) ------>TOE2(3)       ----------->GT1   <---------At4g35610      --------->TOE2(3)----------->GT1   ctttaatatccttcacatattagttagtaattcatattggtttgctgatatctgatttattcttaaaccatagacaaaacgggatagaaaaaacaatcga  1498800                        <------MYB83                        <------MYB46(1)                  <------MYB46(1)                            <                 <-------GAMYB                           <---------DEAR3(2)                         -                --------->MYB111(2)                      <---------MYB46(3)                         <                --------->MYB52(2)                       <------MYB83                              <-                <---------MYB46(3)                     <--------P                                ----                --------->MYB55(2)                    <-------GAMYB                              <---             ------------>MYB.PH3(2)             <---------LBD16          <---------CCA1(2)    <-----      <-------TEIL      ----------->GT1         <---------LBD16 ----------->HVH21              <-----   agcctatatacatgaagtttgttggaaggtttatagttagaactagagaactcgggagttggttccatgacatgttgtatccctggttgtgtctcttgct  1498900             ------>MYB46(1)        --------->GLK1(1)        <---------GLK1(1)       --------->ARR14(2)       <---------ARR14(2)      <------NtERF2     --------->LBD16    <---------ANAC46   ------>NtERF2   <------NtERF2   <---------LBD16  <---------RRTF1(1)  <---------RAP2.3(1)  ------>NtERF2 <---------RAP2.3(2)                                         ---------->DOF2 <---------RRTF1(2)                                       <---------HSFB2a(2) <---------DEAR3(1)                                       --------->LBD16 ---------LBD16                                           --------->HSFB2a(2) -------->At4g35610                                      <---------LBD16 ---------At4g35610                <----------DOF2       <---------HSFB2a(2)    ------>NtERF2<------- ----------RAV1(1)                --------------->AGL15  <---------ANAC46      <---------RAP2.6(2) ------->RAV1(2)                  <---------------AGL15  --------->HSFB2a(2)   <---------ETT(2) ------At4g35610        <-----------GT1     --------->ARR14(2)                 --------->ETT(2) ----ANAC58  ------>MYB83  ------>ZmHOX2a(1)<---------ARR14(2) --------->DAG2  ----------->HVH21 ----ANAC58 <---------ALFIN1   <-----------GT1          <---------LBD16  --------->ATHB12   <--------   tctgcggcggaaacccacttgccattttcctattttcctttcagagtattcgaaaatttccgggaaaggttttggttattggcgaccgagaaaattaccg  1499000                                                                    ------->MYC3                                                                    <-------MYC3                                                                   --------->O2                                                                   <---------TGA1a                                                                   <---------O2                                                                   --------->TGA1a                                                              ----------->HVH21                                                            <---------bZIP60(1)                                                            --------->bZIP60(1)                                                            --------->O2                                                            <---------bZIP60(2)                                                            <---------ANAC58             <---------ANAC58                                                            <---------O2                 <---------ANAC55(2)                                                            --------->TGA1a              <---------ANAC46                                                            <---------TGA1a              <---------ANAC58                                                            --------->ANAC55(2)          <---------ANAC55(1)                                                            <---------ANAC58             ============                                                            <---------ANAC55(1)          <---------TGA1a                                                            <---------ANAC55(2)          <---------bZIP60(2)                                                            <---------ANAC46             --------->O2                                                           <-----------------------TaNAC69(2)    ----                                                         ----------->HVH21  ------------>CBF---------                                                        <---------WOX13(1)--------->At4g35610    ----                                                   ================================================bZIP_DOF                                                   ===================bZIP_DOF           <---------O2                                                   <----------DOF2 --------->bZIP60(2)  ----------->STF1                                                   ==========================bZIP_DOF   ----------->bZIP911(2)     ----------->RAV1(1)             ========================================bZIP_DOF  <---------TGA2(2)    --------->ETT(2)                 ---------->DOF2   <---------ANAC58   <---------At4g35610    ----    <---------ETT(2)           ----------->GT1<---------At4g35610<---------ALFIN1     ----------->TGA1   <------ZmHOX2a(2)   ---------->DOF2--------->DAG2   <---------ANAC58  ------->TEIL ----------->HVH21 --At5g28300           ===============================================bZIP_DOF      <---------At4g35610 ---GT1   *TSS     <---------TOE2(3) =================================bZIP_DOF      --------->At4g35610   tagagatcgacagaaacaaataagataaagaaggtgtcaaaaagtgagagcttctttgagtgacgtgccacgttgcatctcaatttagatgacgtgtaca  1499100                                    ----------->GT1                                 --------->ALFIN1                                <-------MYC3                                <-------MYC4                                ------->MYC3                                <-------MYC2                                ------->MYC2                                ------->PIF5                                <-------PIF5                                ------->MYC4                               <---------TGA1a            <---------ZAT14    <---------PIF3(3)            --------->ABI4(2)  --------->PIF3(3)            --------->ZAT14    --------->ANAC46            <---------ZAT18    --------->TGA1a           --------->ALFIN1    <---------O2         ================================MYC_MYB <------------CBF              --------->O2                                                  <------- ================MYC_MYB    <---------WRKY38(1)                                              <------- ----->ANAC58               <---------ZAT18                 --------->MYB46(3)       ----------->RAV1(1) >REM1(2)------->GAMYB     ----------------->PIF3(1)     --------->GLK1(1)          --------->ANAC46 ----->ANAC58           <------ZmHOX2a(1)    <---------At4g35610                  <-----------GT1 ----->ANAC46  ------>NtERF2--------->ZAT18  --------->At4g35610              --------->CCA1(2)   agccattgcaacggtgcagccagggaggagtccacgtggggaaaatcagcttatttgggataaccactagtcccattcagatatatacaacattggcatg  1499200                                                           <---------AHL20(2)                                                          <---------AHL20(1)     <---------TOE2(3)                                                          --------->AHL20(2)     <---------TOE1(3)                                                <---------ZAT18        <---------YAB1     <---------YAB1   <---------ANAC58        --------------->AtSPL8<---------AHL20(2) --ANAC58             <---------ANAC58     <----------DOF2--------->YAB1 <----------DOF2 --ANAC58----------->HVH21          ------>NtERF2         <---------AHL20(2)     --------->MYB59    -   cttcatgacaattgacacatagatgcctggctatttgaggcctctctttgtgtacatcaataaaattgattttatctttgatttaggtttttttgtttgt  1499300                                                                               <---------DAG2                                  <---------RVE1(1)                            <----------DOF2                                 <---------GLK1(2)                 --------->YAB1                                 --------->ARR11(3)               <---------YAB1                              <---------HSFB2a(2)               --------->GLK1(1)                    --------->ARR11(3)                          <---------GLK1(1)                ---------->DOF2  <---------ARR11(3)            <---------ARR11(3)         <---------AHL20(2)           <-------TEIL       --------->HSFB2a(2)              --------->ARR14(2)        <---------AHL20(2)       --------->ANAC46   <----------DOF2                <-----------GT1 <-----------GT1 --------->AHL20(2) -------->HSFB2a(2) <---------ARR11(3)            <---------ANAC55(2) <---------ICU4   --------->YAB1   ttgtggaacaaggcgcataaaagttcttctttctagattttttgtgttcatcacgtttgtaaccagatatcatagttactactttttaaaaataaatagt  1499400                                     --------->AHL20(2)                                     <---------AHL20(2)                                     --------->YAB1         <---------YAB1        --------->ANAC58                    ------>ZmHOX2a(2)    <---------AHL20(2)     --------->TOE2(3)         --------->ANAC58              --------->YAB1         <---------YAB1   <---------ARR11(3)         --------->ZAT18             <---------GLK1(2)         <---------AHL20(2)   --------->ARR11(3)         <-------TEIL       --------->DOF5.7(2)              --------->YAB1   --------->GLK1(2)      <---------------AtSPL8 --------->At5g28300           --------->TOE2(3)   <-----------ARR10    ---------->DOF2         ----------->GT1<---------YAB1 ----------->GT1     ---   ctcaaaatcttatttttaagtcttaacaaaggtacacaattatatacagacggtaacttagaatcgtgatcggtttgaaaacgtttataatttatagaga  1499500  Previous    Next  AGI:  At3g05260.1    Description:  short-chain dehydrogenase/reductase (SDR) family protein. Identical to Glucose and ribitol dehydrogenase homolog 2 [Arabidopsis Thaliana] (GB:Q9MA93;GB:Q944H4); similar to oxidoreductase [Arabidopsis thaliana] (TAIR:AT1G54870.1); similar to seed maturation protein PM34 [Glycine max] (GB:AAF89645.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 1497489    to: 1499010    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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