Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                <---------CCA1(1)                                 ---                                                <---------RVE1(1)                                 <--                                               <---------AHL20(1)                                <---                                               --------->ARR11(3)                               -----                                             --------->ANAC58                                --------                                         <-----------GT1                                   ---------- -------TEIL                             --------->YAB1                              <------ZmHOX2a(1) ----->ANAC58                  <----------DOF2 <---------ARR11(3)                   ----------->GT1 ----->ANAC58   <----------DOF2<---------DAG2--------->ANAC58---------->DOF2       --------->ANAC58 -----------AtSPL8<---------ICU4    <----------DOF2        <---------YAB1          --------->ANAC58   agtacatttctgatatttctttatgacttctcacttttctttatcacaagatattttgttgatgaaagagtttttttttttgggtaaggaaacatgtaaa  1476600 <---------AHL20(2) ------>AHL20(2) ------>AHL20(1)                                                                              ------- -------AHL20(1)                 <-----------TBP                                             <------- ------AHL20(2)                  --------->AHL20(2)               --------->DOF5.7(2)   <----------DOF2 ---->ICU4              <---------MYB52(1)  --------->GLK1(2)    <----------DOF2 ---------->DOF2 ->AHL20(2)    <-----------RAV1(1)         <---------GLK1(2)     --------->TOE1(3)      ------>ZmHOX2a(1) ->GT1      ------>ZmHOX2a(1)  <-----------TBP <---------YAB1    --------->TOE2(3)--------->DAG2 <---   tattttagtgagtcctcatgttggccgatagccatatatataagagattctgataaaccgttgaaaactttaacccaaaaacaaaaagtcctttctgtga  1476700                                                                                       --------->AHL20(2)                                                                                    --------->AHL20(2)                                                                                   --------->AHL20(2)                                                                             --------->ANAC58                                                                             --------->ANAC46                                                                             --------->ANAC58                                                                           <---------ALFIN1                                                                           ----------->RAV1(1)                                                                           --------->AtMYB61                                                                          --------->ANAC58                       --------->GLK1(1)                                  --------->ANAC58               --------->YAB1                                             --------->ANAC46 ---->HVH21 --------->TOE2(3)                            <-----------GT1--------->ANAC46 ----HVH21 ----------->GT1    --------->YAB1  --------->ANAC58          --------->bZIP60(1) ------bZIP60(1)  ---------->DOF2             --------->ANAC58        <-----------GT1  <---------AHL20(2)   catcgaagtgaaaacgataataaagaaatctagcatagttttggacccaagaaaacgttttactctctattttgacaccacacaaataaaaaaatatgtc  1476800                                                   <---------ANAC55(1)                          <----                                                   --------->ANAC55(2)                          -----                      --------->ZAT6               <---------ANAC46                   <---------YAB1                    <-----------GT1                <---------ANAC58                  --------->AHL20(1)                   --------->AHL20(2)              <---------ANAC55(2)               <---------AHL20(1)                <---------ICU4                     <---------ANAC58                  <---------AHL20(2)               --------->ICU4                     <-----------------------TaNAC69(2)--------->AHL20(2)               <---------YAB1                   --------->ARR14(2)              <---------YAB1  <----             --------->YAB1                    <-------GAMYB               ------->TEIL         -----       <---------At4g35610                    <---------MYB46(3)        --------->ANAC55(2)----------       --------->At4g35610----------->GT1    <---------YAB1       --------->ATHB12 <---------YAB1   ccaaatgttagctaaacataattaactctcgttaaaacaaaaatgtgatggttacgcgtgaaaatggatgatttatgtatttgtgattatatttccaata  1476900                                                                                         --------->MYB46(3)                                                                                        *TSS                            ------------>CBF                                     <---------ATHB12  <---------ANAC58         --------->ANAC58                                    --------->WOX13(1)  <---------ANAC58         --------->ANAC58                                  ------------>CBF -----AHL20(1)           ---------->DOF2                                     <---------------AGL15 ---->AHL20(1)        <---------TOE1(3)                                     <-----------------AG----- -----ARR11(3)        <---------TOE2(3)                                     <-----------------AGL1 ---->ARR11(3)  ----------->GT1                        <----------DOF2     <-----------GT1   <------- -->CBF       ---------->DOF2               --------->ICU4           --------->ICU4--------->MYB59   ttttgctagcctactgaaaagtttaacgaaagcaatggataatggaaagattacaaacttttatattcgacataattttaccaattaggcaacgactttc  1477000              <---------ARR14(2)                                                    <---------MYB52(1)              --------->ARR14(2)                                                   <-----------HVH21            --------->LBD16                             --------->MYB52(1)     --------->ARR14(2)           <---------ANAC55(2)                        <---------MYB52(2)       <---------ARR11(3)   --------->ANAC46                                   --------->MYB46(3)       <---------ARR14(2) ---->YAB1 <---------ANAC46                         <-----------GT1            --------->GLK1(2)    - ---DOF2  <---------LBD16                    ----------->GT1           --------->At5g28300      -----   attacacaaaattgcggaaactatacaaaattagccatggataaaaatggaaaataacaaaccgaaacttggctgtaacaaaatctgttagggatgtttc  1477100                                             <---------AHL20(2)                     <---------AHL20(2)  ----------->GT1                    <---------AHL20(1)   --------->YAB1             ------>MYB83               <---------ATHB12             ------>MYB46(1)        ------->GAMYB           <---------MYB111(2)     --------->MYB46(3)           --------->AtMYB61      ------>MYB83           <---------MYB46(2)     ------>MYB46(1)          --------->ANAC46        -------->P--------->AHL20(2)          --------->ANAC58      --------->AtMYB61        --------->ANAC46       --------->MYB46(3)  --------->AHL20(2)<---------AHL20(2)------>MYB46(1)    ----------->HVH21                ----------- -------->AHL20(2)  --------->AHL20(2)------>MYB83   <---------ANAC58              ----------->GT1 ---->YAB1--------->ANAC58     <---------MYB52(2)    <---------ANAC58 --------->TOE2(3) ---------->DOF2   ataaaaatatacaccaaactaataaaattcgaaaccaaccaaatgataaaattttgcctatgaccaaaaaaacataaatgacacaatgtgaaaagaaaaa  1477200                                 <-------MYC4                                 <-------MYC3                                 ------->PIF5                                 <-------PIF5                                 <-------MYC2                                 ------->MYC3                                 ------->MYC2                                <---------ANAC46                                <---------O2                                --------->TGA1a                                <---------PIF3(3)                                --------->O2                                <---------TGA1a                  --------->HSFB2a(1)                  --------->HSFC1(2)                  <---------HSFB2a(1)                  <---------HSFC1(2)                                            <---------CCA1(2)                --------->ARR14(2)                                             ------>MYB83                <---------ARR14(2)--------->ALFIN1                    <---------ZAT14               <------ZmHOX2a(1)--------->PIF3(3)                     <---------ZAT18         <---------WOX13(1)     <<<<<<<<<<HY5                         --------->ZAT14        <---------ANAC46<-----------RAV1(1)                       <---------ALFIN1       --------->ATHB12 ------>ZmHOX2a(1)                      --------->bZIP60(1)         <---------YAB1       <---------MYB46(3)    ---------------->PIF3(2)          <---------bZIP60(1)     <----------DOF2   <---------MYB46(3)------>MYB46(1) <---------ARR14(2)     ----------->HVH21  ------>MYB46(1) >GT1 <---------YAB1 ------>MYB83------->MYC4             --------->At4g35610<---------MYB59  -------   catatttgttgattggaggaaccttcctgttgccacgtggaacttgaagtttgacacaattgctgacaccactgtactacctatctcttctttatgaatc  1477300                                                                                      --------->ZAT2                                                                                      --------->HSFC1(2)                                                                                      --------->At4g35610               --------->ANAC58                                                       --------->HSFB2a(1)               --------->ANAC46                                                       <---------HSFC1(2)               --------->ANAC58                                                       <---------HSFB2a(1)             <-----------GT1                              --------->ANAC58           ----------->ARR10    <---------ARR11(3)                                    --------->ANAC46      <---------YAB1    --------->ARR11(3)                 ------>ZmHOX2a(1)  --------->ANAC58    <---------ICU4  ------- >TEIL <----------DOF2       <----------DOF2        --------->AHL20(2)        --------->YAB1 <------ZmHOX2a(2)   ttcaaatgtctttttttacgctataaactcactttcttctcctccaagagccaaataaacacacaaaaaaaaactcaaaatcatgagaagctccgatcat  1477400                                                     <------ZmHOX2a(2)                                                    <---------ARR14(2)           <---------ANAC46                         <---------AGP1          <------NtERF2                             --------->ARR14(2)         <---------RAP2.6(3)                        --------->ARR11(3)         ------>NtERF2                              <-----------ARR10         --------->LBD16                        <---------At4g35610        <---------ATERF1(2)                     --------->At4g35610        <---------RAP2.6(2)                --------->YAB1        <---------RAP2.3(3)               <---------YAB1        --------->ATERF1(2)             --------->YAB1------>ZmHOX2a(2)       <---------LBD16           <---------ANAC58   --------->GLK1(2)              ----------->RAV1(1)   <-------GAMYB                 <---------ANAC46  <---------CCA1(2)           <-----------HVH21 <---------ANAC58                <---------ANAC58  <---------ARR14(1)    --------->DEAR3(1)   ------- <---------ANAC58            <---------ANAC58   <---------LBD16       --------->YAB1       <--------- <---------ANAC46    <---------MYB52(1)<---------AHL20(2)            <---------ATHB12    <---------ATHB12 -->YAB1<---------DEAR3(1)   <---------ANAC58--------->At4g35610   --------->WOX13(1)--------->MYB46(3)   atggcgtttgccggcgttttgccgattgttttcttgcttatattatcatcagcggatctagcagcgagtcaatcacagcccggtccaacaaatcaaccgt  1477500  Previous    Next  AGI:  At3g05200.1    Description:  ATL6 (Arabidopsis T?xicos en Levadura 6); protein binding / zinc ion binding. Identical to RING-H2 finger protein ATL3B precursor (ATL3B) [Arabidopsis Thaliana] (GB:Q8RXX9;GB:Q9MA99;GB:Q9XF65); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G27420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83712.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 1476988    to: 1478736    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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