Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------AHL20(2)                           --------->ANAC55(2)                           <---------ANAC58                           <---------ANAC55(1)                           <---------ANAC46             --------->ATHB51 --------->ARR14(2)            <---------AHL20(2)<---------ARR14(2)       <----------DOF2 --------->At4g35610  <----------DOF2 <---------ANAC58      <---------ARR14(2) <---------DAG2   <---------ANAC58      --------->ARR14(2) ------>P --------->YAB1   <---------ANAC58 ---------GT1<---------ICU4<---------ANAC55(2)    <---------ATHB12                                --- -----MYB52(2)    <---------AtLEC2   <---------TOE2(3)                                   ----------->GT1 -----MYB59 <---------YAB1<-------TEIL <------ZmHOX2a(1)                          <---------GLK1(2)   taaccttttcttttataattgcatgagatgcgtattttttaggataggcccaataagcctgataggcccaaatagttttttcgaggttctctagtaaaaa  1471000                                               <------NtERF2                                              ------>NtERF2                                              --------->LBD16             ------>ZmHOX2a(1)                                             <---------DEAR3(1)    ==================================                                             --------->DEAR3(1)    <---------ANAC58                                      --------->GLK1(2)            <---------ANAC46                                      --------->ARR14(2)           <---------bZIP60(2)          ----------->GT1             <---------ARR14(2)           <---------ANAC58        <---------ANAC46             <---------GLK1(2)             <---------TGA1a     <------NtERF2       <---------At4g35610        --------->YAB1                   <---------O2       --------->HSFB2a(2)    ---------->DOF2            <---------GLK1(1)                 --------->REM1(2)   --------->ETT(1)  <---------YAB1     <---------AHL20(2)     <---------LBD16      <-----------HVH21   <---------ANAC46 ------>TOE2(3)     --------->AHL20(2)<-----------ARR10     <---------At5g28300      <---------LBD16-   catcaatatagctggtaaaatataaaatggaagaaatcagaatctcgccggggctatagcttcaccgtgtcgtgtcctaatctattgtcgggaatttgaa  1471100                              --------->ANAC58                             --------->SPL7                 --------->MYB46(3)                            --------->MYB52(1)      <---------MYB52(1)                          --------->ANAC58         <---------MYB52(1)                          --------->ANAC58   <---------GLK1(1)     <-----------GT1      <---------MYB52(2) --------->GLK1(1)  ----------->GT1<---------TOE2(3) <------NtERF2  --------->LBD16             <---------AHL20(2) ==========bZIP_DOF<------ZmHOX2a(1)    ----------->GT1   <-----------GT1  ----------->GT1 --------->DOF2 --------->YAB1--------->ANAC58  <---------LBD16  --------->ARR14(2)              ----   gctaaagtaacattacaatgaggaaaccacgaacggcagagatggtgatttccggttatttaaccacgattcgatactagtaaattgatatttctcttac  1471200                                                       ---------->DOF2                                               <---------ANAC55(2)                                               ----------->GT1                            --------->ANAC58                                  <---------AHL20(2)--------->ZAT6                        --------->AtLEC2                         ---------->DOF2       --------->ANAC55(2)                        --------->ANAC46                      <---------TOE2(3)       --------->MYB59               <---------ANAC58                   <---------AHL20(2)    <---------AHL20(2)                 <---------ANAC58--------- ----->TOE2(3)     --------->AHL20(2)    --------->AHL20(2)        <----------DOF2        --------->ANAC58   attattttgaaggcttcttattttaatgaaagttattttttttttaaataggtaacacaaagttggcatcttttttttgcttactaaattccaagcaaaa  1471300                                                                                          --------->ZAT14                                                                                      --------->ZAT6                                                                                   --------->ZAT14                                                                                  <----------DOF2                                                                                  <---------DAG2                                                                               <---------ALFIN1                                                                              --------->ZAT14                                                                              <---------ZAT18                <---------ANAC58                                     <-----------GT1<-----------GT1                <---------ANAC58                          <---------ANAC46    <---------ZAT14                <---------ANAC46            <----------DOF2 <---------ANAC46--------->ANAC58   ------            --------->CCA1(2)         <---------ANAC58   <---------AtMYB61  --------->ANAC46   ------            <---------GLK1(1)         <---------ANAC58 --------->ALFIN1     --------->ANAC58   ------  ---------->DOF2                  <---------GLK1(2)   <---------ANAC46--------->ETT(2) --------->ANAC46 >YAB1 <------------CBF  --------->GLK1(2)---------->ID1 --------->ALFIN1 <---------ALFIN1<---------ZAT14   tagagaaagaattgatatgcgtgcaagtttctgtccaaattcttgtcttttttggaggtgtggtgttgttttatcgacactccactttacacttcacaag  1471400                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    <                                                                  --------->ARR14(2)                <                                                        <---------YAB1                      <--------   *TSS--------->YAB1                               <-----------TGA1<---------LBD16<---------ATHB12 - --->ANAC58                                         <-----------HVH21   <---------DEAR3(1)  --------- --->ANAC58    --------->DAG2                      --------->DEAR3(1) --------->LBD16       --------- --->ANAC46   ---------->DOF2                ----------->HVH21    <---------ARR14(2)--------->YAB1  <   tcacaacacttataacaaaagtgatcacagaggccagagttgagagtttgacaccgtcatcaatggcagaaccggaggtgattcactcatggtctgcacc  1471500              ------>MYB83            <---------ALFIN1            --------->MYB46(3)  ------>ZmHOX2a(2) --------->GLK1(1) <---------GLK1(1)                                         --------->ARR14(2) <------ZmHOX2a(2)                                        <---------CCA1(2) ---------AGP1------>MYB46(1)                             ------>ZmHOX2a(1) -------->ARR14(3)                                 <---------DAG2 -------->ARR14(2)                                 <----------DOF2 ---------ARR14(3)                              ------>MYB46(1) ---------ARR11(3)                              ------>MYB83                                        < -ZAT14 <---------At4g35610                   <---------MYB59                                   ----- -------->ARR11(3)                           --------->ANAC58                                 ------- >ZAT18 --------->At4g35610 <----------DOF2  --------->ANAC46                               --------- >At4g35610--------->At4g35610    <-----------RAV1(2)  <-----------GT1                  --------->ZAT6 ---------ARR14(2)     ------->TEIL          --------->ANAC58                     <---------ZAT6<----   aagatctctcagcaccagcctcatgtactcctttgctcaggtactatacccaactttttcctatcttcttgacaaattttccaagtgttaactctaaaga  1471600                                                                            <---------------AGL15                                                                          <---------At4g35610                                                                          --------->At4g35610                                                                      <-----------HVH21                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                   <---------ANAC55(2)                                                                   <---------ANAC58  --------->ARR11(3)                                               --------->ANAC55(2)  <---------ARR11(3)                                               <---------ANAC55(1) --------->YAB1                                                   <-----------------------TaNAC69(2) ---------YAB1                                                 <---------ANAC58    ----------->GT1 ---->ARR11(3)     --------->TOE2(3)       ---------->ID1      <---------ANAC58---------->DOF2 -->ICU4        ------>MYB83  <----------DOF2 <---------ZAT14 <---------------AtSPL8          <------ ->DOF2         <---------CCA1(2) <---------ANAC58            <---------------AtSPL3  ---------->DOF2 -----GLK1(2)   ------>MYB46(1)   <---------ANAC58       <---------AHL20(2) --------------->AGL15   ttatgatcatccaaaaccaaatctcaattctgctttgctcgttttgtctccactgagaaaaaattgagtacgtgttagctccaaagagtaaagactatga  1471700                                                      ---------->DOF2                                                   ------>ZmHOX2a(1)                                                   --------->HSFB2a(2)                                                   <---------HSFB2a(2)                                                 ------>ZmHOX2a(2)                                                <------ZmHOX2a(2)                                               <---------ARR14(2)                                               --------->ARR11(3)                                               --------->AGP1                                               <---------ARR11(3)       <---------AHL20(2)                      --------->ARR14(2)       --------->AHL20(2)                     <---------GLK1(1)                          <----------DOF2      --------->AHL20(2)                      --------->GLK1(1)                      <---------ZAT18-      <---------ATHB12                       ----------->ARR10            <---------At4g35610  <----- ---YAB1   --------->ARR11(3)             --------->TOE1(2)    ------->TEIL         <---------ZAT6 <-   tttatctaataaataacttggaaagtttggaagaacaaaaaaaacatgagatcctagaaagaatgaatcactatggagatgatttagtgttctttttctt  1471800            ------->TEIL     <---------TOE2(3)                       --------->ETT(2)                 --------->CCA1(2)  ----  <---------WOX13(1)                         <---------ETT(2)         --------->TOE2(3)     --------- -------->ATHB12                     --------->ZAT14             --------->ATHB12      <---------YAB1 -----DOF2 <---------CCA1(2)         <---------ZAT14             <---------ICU4 <-----------RAV1(2) --------YAB1                 ----------->HVH21        <---------MYB52(1)---------->DOF2    ---------   tgtgattgatgttgtatctatatatcagagacttgacactgaagttgtcgacgagccgttgtatgcatcatttcttaaagctacaggttttgataggcca  1471900  Previous    Next  AGI:  At3g05190.1    Description:  aminotransferase class IV family protein. Identical to Branched-chain-amino-acid aminotransferase-like protein 1 [Arabidopsis Thaliana] (GB:Q8W0Z7;GB:Q9MAA0); similar to aminotransferase class IV family protein [Arabidopsis thaliana] (TAIR:AT5G27410.1); similar to hypothetical protein OsJ_010473 [Oryza sativa (japonica cultivar-group)] (GB:EAZ26990.1); similar to branched-chain amino acid aminotransferase-like protein [Cicer arietinum] (GB:CAD70620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17658.1); contains InterPro domain Aminotransferase, class IV; (InterPro:IPR001544) Range:  from: 1471403    to: 1475790    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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