Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->ATHB12                                        <---------ICU4                                       --------->ICU4                                       <---------YAB1                                --------->AHL20(2)                          <---------MYB46(3)                                <---------AHL20(2)                  <----------DOF2                             --------->AHL20(2)                  --------->ARR11(3)                            --------->AHL20(2)                   <---------AHL20(1)                            <---------AHL20(2)                   <---------ARR11(3)                        --------->AHL20(2)--------->ICU4        --------->CCA1(1)                        <---------AHL20(2)<---------YAB1        --------->RVE1(1)               --------->ARR11(3)    --------->YAB1         <---------AHL20(2) ---------ANAC58  --------->AHL20(2) <---------ICU4         --------->AHL20(2)   ---------->DOF2 ---------ANAC46  <---------AHL20(2)<---------ATHB12    <---------DAG2     <---------ANAC46 ---------ANAC58--------->CCA1(2)<---------AHL20(2)     <----------DOF2 <---------AtMYB61 ---------GT1  <---------ARR11(3)--------->AHL20(2)  <------ZmHOX2a(1)  <-----------RAV1(1)     -----   ttacttgtataatatgagatataaatataaataaataaatcatgattattgaataggacttttttaatatctttttggtgggcaaaagagagacaattgt  1389100               <---------AHL20(2)               --------->AHL20(2)              <---------AHL20(2)              <---------AHL20(1)              --------->AHL20(2)              <---------AHL20(2)              <---------AHL20(2)          --------------->AGL15     --------->ATHB51    ------->MYC3                    --------->ATHB12    <-------MYC3          --------->YAB1     <---------YAB1  <---------TOE2(2)   ---------->DOF2      <---------ICU4  <---------TOE1(2)<---------AHL20(2)     <---------YAB1 <---------ALFIN1  --------->AHL20(2)     --------->ICU4                        <---------WOX13(1) ----->ARF1   --------->AHL20(2)   <---------YAB1                 <-----------GT1                <---   ctcccacgttttctaatttaattaaaaagaataacacattattgattattaaatagcacttcaaaaatttacatttcataagattgattttgaaattaga  1389200                                                                                    <-----------GT1                                                                                <--------HAHB4                                                                                --------->YAB1                                                                                <--------ATHB1                                                                                --------->ATHB51                                                    --------->AHL20(2)          <---------ICU4 <-----                                       ---------->DOF2           --------->ANAC46  --------->AHL20(2)                             <-------TEIL           <---------AHL20(2)<---------ANAC55(2)<----------DOF2                            --------->CCA1(2)   --------->ICU4   <---------ICU4<---------ATHB51------        --------->ICU4     --------->ARR11(3) --------->AHL20(2) --------->YAB1--------->ICU4<-------   ----------->GT1       <---------TOE2(3)    --------->YAB1   <-----------GT1 <---------ATHB12------ ---ZmHOX2a(2)        --------->AHL20(2)   --------->YAB1  <----------DOF2     --------->AHL20(2)   tcagcttgtaataagtctttcaaatttaagatacagaattgaaaagaataatatttaaattctttaaacatcacatgtccaataattaactctttaaaca  1389300                                                                                            <--------                                                                                          <----------  ----------->GT1              ----------->GT1                                        <---------YAB1 ----ICU4              ---------->DOF2                                                --------->ICU4 --->YAB1           --------->AHL20(2) --------->YAB1                               --------->YAB1 <- ----GT1          --------->YAB1      <---------YAB1                   --------->ALFIN1<---------ICU4 --->ANAC46----------->GT1 <------ZmHOX2a(1)                     --------->ALFIN1  <---------YAB1----   tcacatgtaaaatcagttaaaaataaaaaggatgagaaaaatgatagttttttttttttgttttagagtggaagtgggagaagcgatgataattacctat  1389400                                                        <------NtERF2                                                       *TSS                                                      <---------ETT(2)                                               --------->ARR14(2)                                      <---------ANAC46--------->ETT(2)    <----------DOF2              <---------ANAC58  <------MYB83 -ANAC55(2)                      <---------ANAC46 <---------AtMYB61                      <---------ARR14(2) -GT1     <----------DOF2  <---------YAB1      <---------ARR14(2)                  --------->TOE1(2) ----------GT1      --------->ICU4<-----------HVH21<------MYB46(1)         <-----------GT1 ----->YAB1  <---------ANAC46    <---------ANAC58 --------->MYB59  >>>>>>>>>TBF1 <-------TEIL     ---   aataccctttaacttttgtgtaattactcatgtttgcgtcaagtgtatggatttggtcgccagagagaagaagaaatatacgattcatacgaattctgta  1389500                                   <---------HSFB2a(2)                                   --------->HSFB2a(2)                                   <---------HSFC1(1)                                   --------->HSFC1(1)                              <----------DOF2               <---------ANAC58                            <-----------------AGL3          <---------ANAC58                         <---------At4g35610            <---------At4g35610           <---------CCA1(2)<-----------------AGL1 <----------DOF2                      -------------       --------->TOE2(3) --------->At4g35610      <---------ANAC58    --------->ZAT6    ------------- -------->GT1  <---------HSFB2a(2)<---------LBD16 <---------ANAC58<----------CDC5   <---------YAB1   tcgcaaaaacatcaaatctcgaaattgagctccttttctggaactagggattgctttccgctccttgcgctaagtctacttggtttctgattcgtacaat  1389600                                        --------->MYB52(2)                                        <---------ANAC58                                        <---------ANAC58                                      <---------MYB52(1)                                  <---------At5g28300                            ----------->GT1    -                                 <-----------GT1                             --------->LBD16        <                           <---------ANAC46                                <------NtERF2          <--                           <---------ANAC58                                <---------LBD16      <----                ---------->CDC5 --------->ATERF1(1)                       ------>NtERF2      <-------GAMYB             --------->ZAT18    ----------->HVH21                     ------>NtERF2          <------NtERF2        <---------ANAC58   <---------ANAC58                           <---------ATERF1(1)   <--------        <---------ANAC58  <---------LBD16               --------->ANAC58  --------->MYB52(1)<-------- -->AtSPL3   --------->ZAT14   <-----------HVH21        --------->ANAC58 <---------ALFIN1  <---------ANAC46 -->AtSPL8   <---------ZAT14--------->LBD16      <---------LBD16  ----------->HVH21       <---------LBD16   ttgatgaaatgcgagtgctcagcgagattgcggagtcaccgttcgtgatttctcggctaagccctgattcgacggccaccggagggtttatcggcggatg  1389700  <------NtERF2 <---------HSFB2a(2)                                                       <---------TOE2(1) --------->HSFB2a(2)                                                       <---------TOE1(1) -------->ETT(1)                                                        --------->ZAT18 ---------ANAC46                                                        <---------SPL7 ---------HVH21                                                         <---------ZAT18   <---------ANAC58 -----MYB46(3)                                                         <---------ANAC58   <---------ANAC58 -SPL7  <-----------HVH21          <---------AtMYB61                   <---------ANAC58 <---------ARR11(3) -MYB46(3)            --------->YAB1     <-----------GT1   ---------->ID1 --------->SPL7--------->ARR11(3)   ggtcgggaagtgtcatgggtttcttcataacacggttttggttttagcatctattctattcgtcgcttacttagcgtacgaggcgaagaagagcttgtcc  1389800                               ----------------->AGL1                               <-----------------AGL1                               <-----------------AG                               <-----------------AGL3                               ----------------->AGL2                               <---------ANAC58                               <---------ANAC58                               ----------------->AG                            <---------WOX13(1)                          --------->ATHB12                          <---------ICU4                         --------->ICU4                                            <---------ANAC58                         <---------YAB1            <---------ANAC46                <---------ANAC58                ------>ZmHOX2a(2)             <----------DOF2                 <-----------RAV1(1)               <------ZmHOX2a(2)      <---------TOE2(3)                  <---------ANAC58              --------->ARR14(3)      <---------YAB1                     <---------AtLEC2         <--              --------->ARR14(2)      <---------TOE1(3)                  <---------ANAC46         <--              <---------ARR14(2)    --------->YAB1 <---------ANAC58      <---------ANAC58    --------              <---------ARR14(3)   <---------YAB1  <---------ANAC58 <---------ATHB12   <-----------RAV1(2)              <---------ARR11(3)<---------------AGL15      <---------ANAC58 <------MYB83<---------TOE1(3)              --------->ARR11(3)--------------->AGL15      <---------ANAC58 <------MYB46(1)  <-------             <---------GLK1(1) <-----------------AGL2     <---------At4g35610 =====================RAV             --------->GLK1(1) ----------------->AGL3     --------->At4g35610 <---------REM1(1)  ----   aagttgtctaatcggagatcttacattatgattgcctattatggttttctttggcttgttagcttgctcaatcttgcttggtgttgccttcaggtttgtt  1389900                                                       ---------->DOF2         <----------DOF2                             --------->REM1(2)       <------------------------ANAC81            <---------ANAC58 <---------ARR11(3)                          <-----------RAV1(1) --------->ARR11(3)                         <---------TOE2(2) <------ZmHOX2a(2) -------TOE2(3)               --------->ANAC58    <---------ANAC55(1) -------TOE1(3)               --------->ANAC46    <---------ANAC55(2) ->MYB52(2)                   --------->ANAC55(1) <---------ANAC46                      <----------DOF2 --MYB46(3)                   --------->ANAC58    <---------ANAC58                      <------------ ------>DOF2        <-------TEIL          --------->TOE2(2) <---------GLK1(1)   >>>>>>>>>TBF1   aaagttctcttctttacttcgattcatttcacaagtaactcatacctatgttgcgtgtaaagagatcagaacttagattgaagaagaatgctttttagag  1390000  Previous    Next  AGI:  At3g05010.1    Description:  transmembrane protein, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G27210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15118.1) Range:  from: 1389455    to: 1391681    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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